RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 ZNF518AQ6AHZ1 1483 aa23.08■■□□□ 1.29
CAPN13-203ENST00000458085 CCDC144AA2RUR9 1427 aa23.08■■□□□ 1.29
CAPN13-203ENST00000458085 CFAP74Q9C0B2 1584 aa23.08■■□□□ 1.29
CAPN13-203ENST00000458085 DEPDC5O75140 1603 aa23.07■■□□□ 1.28
CAPN13-203ENST00000458085 POGZQ7Z3K3 1410 aa23.06■■□□□ 1.28
CAPN13-203ENST00000458085 WASHC2AQ641Q2 1341 aa23.06■■□□□ 1.28
CAPN13-203ENST00000458085 DHX29Q7Z478 1369 aaKnown RBP23.06■■□□□ 1.28
CAPN13-203ENST00000458085 UHRF1BP1Q6BDS2 1440 aa23.05■■□□□ 1.28
CAPN13-203ENST00000458085 SPATA31E1Q6ZUB1 1445 aa23.05■■□□□ 1.28
CAPN13-203ENST00000458085 KDM2AQ9Y2K7 1162 aa23.05■■□□□ 1.28
CAPN13-203ENST00000458085 KIF3BO15066 747 aa23.05■■□□□ 1.28
CAPN13-203ENST00000458085 DCAF11Q8TEB1 546 aa23.04■■□□□ 1.28
CAPN13-203ENST00000458085 C11orf95C9JLR9 678 aaPredicted RBP23.03■■□□□ 1.28
CAPN13-203ENST00000458085 KDM5CP41229 1560 aa23.03■■□□□ 1.28
CAPN13-203ENST00000458085 E9PCH4 1651 aa23.03■■□□□ 1.28
CAPN13-203ENST00000458085 CENPBP07199 599 aaPredicted RBP23.02■■□□□ 1.28
CAPN13-203ENST00000458085 ATP10AO60312 1499 aa23.02■■□□□ 1.28
CAPN13-203ENST00000458085 MROH1Q8NDA8 1641 aa23.01■■□□□ 1.27
CAPN13-203ENST00000458085 MAP3K4Q9Y6R4 1608 aa23■■□□□ 1.27
CAPN13-203ENST00000458085 RGL3Q3MIN7 710 aa23■■□□□ 1.27
CAPN13-203ENST00000458085 EIF2AK4Q9P2K8 1649 aaKnown RBP23■■□□□ 1.27
CAPN13-203ENST00000458085 VWDEQ8N2E2 1590 aa23■■□□□ 1.27
CAPN13-203ENST00000458085 NEO1Q92859 1461 aa22.99■■□□□ 1.27
CAPN13-203ENST00000458085 RAPGEF3O95398 923 aa22.98■■□□□ 1.27
CAPN13-203ENST00000458085 RALGAPBQ86X10 1494 aa22.98■■□□□ 1.27
CAPN13-203ENST00000458085 MLH3Q9UHC1 1453 aa22.97■■□□□ 1.27
CAPN13-203ENST00000458085 PRDM15P57071 1507 aaPredicted RBP22.96■■□□□ 1.27
CAPN13-203ENST00000458085 A2MP01023 1474 aa22.96■■□□□ 1.27
CAPN13-203ENST00000458085 HECW2Q9P2P5 1572 aa22.96■■□□□ 1.27
CAPN13-203ENST00000458085 TET3O43151 1660 aa22.96■■□□□ 1.27
CAPN13-203ENST00000458085 USP47Q96K76 1375 aa22.95■■□□□ 1.27
CAPN13-203ENST00000458085 FRMPD1Q5SYB0 1578 aa22.95■■□□□ 1.26
CAPN13-203ENST00000458085 GLI2P10070 1586 aa22.94■■□□□ 1.26
CAPN13-203ENST00000458085 KANK1Q14678 1352 aa22.94■■□□□ 1.26
CAPN13-203ENST00000458085 CCDC7Q96M83 1385 aa22.94■■□□□ 1.26
CAPN13-203ENST00000458085 ABCA6Q8N139 1617 aa22.93■■□□□ 1.26
CAPN13-203ENST00000458085 PRAG1Q86YV5 1406 aa22.92■■□□□ 1.26
CAPN13-203ENST00000458085 SPHKAPQ2M3C7 1700 aa22.92■■□□□ 1.26
CAPN13-203ENST00000458085 PTPRTO14522 1441 aa22.91■■□□□ 1.26
CAPN13-203ENST00000458085 SCAF1Q9H7N4 1312 aaKnown RBP22.91■■□□□ 1.26
CAPN13-203ENST00000458085 TRPM2O94759 1503 aa22.91■■□□□ 1.26
CAPN13-203ENST00000458085 DIP2BQ9P265 1576 aa22.91■■□□□ 1.26
CAPN13-203ENST00000458085 FAM69CQ0P6D2 419 aa22.91■■□□□ 1.26
CAPN13-203ENST00000458085 CARD11Q9BXL7 1154 aa22.9■■□□□ 1.26
CAPN13-203ENST00000458085 BCORL1Q5H9F3 1711 aa22.9■■□□□ 1.26
CAPN13-203ENST00000458085 KIF7Q2M1P5 1343 aa22.9■■□□□ 1.26
CAPN13-203ENST00000458085 ANP32CO43423 234 aa22.89■■□□□ 1.26
CAPN13-203ENST00000458085 RICTORQ6R327 1708 aa22.89■■□□□ 1.25
CAPN13-203ENST00000458085 RNF17Q9BXT8 1623 aaKnown RBP22.88■■□□□ 1.25
CAPN13-203ENST00000458085 CLTCL1P53675 1640 aa22.87■■□□□ 1.25
CAPN13-203ENST00000458085 TRPM1Q7Z4N2 1603 aa22.87■■□□□ 1.25
CAPN13-203ENST00000458085 POLR1AO95602 1720 aaPredicted RBP22.87■■□□□ 1.25
CAPN13-203ENST00000458085 CEP152O94986 1710 aa22.86■■□□□ 1.25
CAPN13-203ENST00000458085 ROCK2O75116 1388 aaKnown RBP22.85■■□□□ 1.25
CAPN13-203ENST00000458085 PPRC1Q5VV67 1664 aaKnown RBP22.85■■□□□ 1.25
CAPN13-203ENST00000458085 CNTLNQ9NXG0 1405 aa22.85■■□□□ 1.25
CAPN13-203ENST00000458085 EFCAB6Q5THR3 1501 aa22.84■■□□□ 1.25
CAPN13-203ENST00000458085 DIP2CQ9Y2E4 1556 aa22.84■■□□□ 1.25
CAPN13-203ENST00000458085 NBPF1Q3BBV0 1214 aa22.84■■□□□ 1.25
CAPN13-203ENST00000458085 TSPOAP1O95153 1857 aa22.84■■□□□ 1.25
CAPN13-203ENST00000458085 GGT6Q6P531 493 aa22.83■■□□□ 1.25
CAPN13-203ENST00000458085 UGGT1Q9NYU2 1555 aa22.82■■□□□ 1.24
CAPN13-203ENST00000458085 YEATS2Q9ULM3 1422 aa22.82■■□□□ 1.24
CAPN13-203ENST00000458085 LMTK2Q8IWU2 1503 aa22.81■■□□□ 1.24
CAPN13-203ENST00000458085 ST20-MTHFSA0A0A6YYL1 179 aa22.8■■□□□ 1.24
CAPN13-203ENST00000458085 CCER2I3L3R5 266 aa22.79■■□□□ 1.24
CAPN13-203ENST00000458085 GPRASP1Q5JY77 1395 aa22.77■■□□□ 1.24
CAPN13-203ENST00000458085 CFAP65Q6ZU64 1925 aaKnown RBP22.76■■□□□ 1.23
CAPN13-203ENST00000458085 POLR3GLQ9BT43 218 aa22.75■■□□□ 1.23
CAPN13-203ENST00000458085 NPATQ14207 1427 aa22.75■■□□□ 1.23
CAPN13-203ENST00000458085 ABCC3O15438 1527 aa22.73■■□□□ 1.23
CAPN13-203ENST00000458085 MADDQ8WXG6 1647 aa22.73■■□□□ 1.23
CAPN13-203ENST00000458085 WASHC2CQ9Y4E1 1318 aa22.72■■□□□ 1.23
CAPN13-203ENST00000458085 GTF3C3Q9Y5Q9 886 aa22.71■■□□□ 1.23
CAPN13-203ENST00000458085 LAMC1P11047 1609 aa22.71■■□□□ 1.23
CAPN13-203ENST00000458085 KIF13AQ9H1H9 1805 aa22.7■■□□□ 1.22
CAPN13-203ENST00000458085 ZMYM4Q5VZL5 1548 aa22.7■■□□□ 1.22
CAPN13-203ENST00000458085 MROH2AA6NES4 1674 aa22.68■■□□□ 1.22
CAPN13-203ENST00000458085 KIF1BO60333 1816 aa22.68■■□□□ 1.22
CAPN13-203ENST00000458085 ARID4BQ4LE39 1312 aaPredicted RBP22.68■■□□□ 1.22
CAPN13-203ENST00000458085 CAMSAP1Q5T5Y3 1602 aa22.67■■□□□ 1.22
CAPN13-203ENST00000458085 NEURL4Q96JN8 1562 aa22.67■■□□□ 1.22
CAPN13-203ENST00000458085 PRKRIP1Q9H875 184 aaPredicted RBP22.66■■□□□ 1.22
CAPN13-203ENST00000458085 SIGLEC1Q9BZZ2 1709 aa22.65■■□□□ 1.22
CAPN13-203ENST00000458085 CCDC184Q52MB2 194 aa22.62■■□□□ 1.21
CAPN13-203ENST00000458085 TESK2Q96S53 571 aa22.62■■□□□ 1.21
CAPN13-203ENST00000458085 COL17A1Q9UMD9 1497 aaPredicted RBP22.62■■□□□ 1.21
CAPN13-203ENST00000458085 STAC3Q96MF2 364 aa22.61■■□□□ 1.21
CAPN13-203ENST00000458085 ADGRB3O60242 1522 aa22.61■■□□□ 1.21
CAPN13-203ENST00000458085 IFT172Q9UG01 1749 aa22.61■■□□□ 1.21
CAPN13-203ENST00000458085 ADGRF5Q8IZF2 1346 aa22.61■■□□□ 1.21
CAPN13-203ENST00000458085 CHGAP10645 457 aaKnown RBP22.6■■□□□ 1.21
CAPN13-203ENST00000458085 NOS1P29475 1434 aa22.6■■□□□ 1.21
CAPN13-203ENST00000458085 MYOM2P54296 1465 aa22.59■■□□□ 1.21
CAPN13-203ENST00000458085 DISP3Q9P2K9 1392 aa22.58■■□□□ 1.21
CAPN13-203ENST00000458085 IQGAP1P46940 1657 aa22.58■■□□□ 1.2
CAPN13-203ENST00000458085 SYNMO15061 1565 aa22.58■■□□□ 1.2
CAPN13-203ENST00000458085 ZC3H13Q5T200 1668 aaKnown RBP22.57■■□□□ 1.2
CAPN13-203ENST00000458085 CNGB1Q14028 1251 aaPredicted RBP22.56■■□□□ 1.2
CAPN13-203ENST00000458085 ARHGAP31Q2M1Z3 1444 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms