RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 TYW1BQ6NUM6 668 aa10.38□□□□□ -0.75
UBDP1-202ENST00000457888 PHF14O94880 888 aa10.37□□□□□ -0.75
UBDP1-202ENST00000457888 ITGBL1O95965 494 aaPredicted RBP10.37□□□□□ -0.75
UBDP1-202ENST00000457888 LAPTM4BQ86VI4 370 aa10.37□□□□□ -0.75
UBDP1-202ENST00000457888 BCAMP50895 628 aa10.36□□□□□ -0.75
UBDP1-202ENST00000457888 SOWAHBA6NEL2 793 aa10.34□□□□□ -0.75
UBDP1-202ENST00000457888 KIAA1468Q9P260 1216 aa10.34□□□□□ -0.75
UBDP1-202ENST00000457888 NYAP1Q6ZVC0 841 aa10.33□□□□□ -0.76
UBDP1-202ENST00000457888 ZFRQ96KR1 1074 aaKnown RBP10.33□□□□□ -0.76
UBDP1-202ENST00000457888 CADPS2Q86UW7 1296 aa10.32□□□□□ -0.76
UBDP1-202ENST00000457888 ONECUT3O60422 494 aaPredicted RBP10.31□□□□□ -0.76
UBDP1-202ENST00000457888 C6orf132Q5T0Z8 1188 aa10.3□□□□□ -0.76
UBDP1-202ENST00000457888 EPAS1Q99814 870 aa10.3□□□□□ -0.76
UBDP1-202ENST00000457888 WBP1LQ9NX94 342 aa10.29□□□□□ -0.76
UBDP1-202ENST00000457888 DCAF8L2P0C7V8 631 aa10.28□□□□□ -0.76
UBDP1-202ENST00000457888 SEPT9Q9UHD8 586 aaPredicted RBP10.28□□□□□ -0.76
UBDP1-202ENST00000457888 KCNC4Q03721 635 aa10.27□□□□□ -0.77
UBDP1-202ENST00000457888 CAMK2BQ13554 666 aa10.27□□□□□ -0.77
UBDP1-202ENST00000457888 TRIM6-TRIM34B2RNG4 842 aa10.26□□□□□ -0.77
UBDP1-202ENST00000457888 DPYSL4O14531 572 aa10.26□□□□□ -0.77
UBDP1-202ENST00000457888 FAM98CQ17RN3 349 aaKnown RBP10.25□□□□□ -0.77
UBDP1-202ENST00000457888 RBM33Q96EV2 1170 aaKnown RBP10.24□□□□□ -0.77
UBDP1-202ENST00000457888 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.23□□□□□ -0.77
UBDP1-202ENST00000457888 TSR3Q9UJK0 312 aaKnown RBP10.23□□□□□ -0.77
UBDP1-202ENST00000457888 Q6ZNB5 142 aa10.22□□□□□ -0.77
UBDP1-202ENST00000457888 LRCH3Q96II8 777 aa10.22□□□□□ -0.77
UBDP1-202ENST00000457888 DDX12PQ92771 950 aa10.21□□□□□ -0.77
UBDP1-202ENST00000457888 HPS5Q9UPZ3 1129 aa10.21□□□□□ -0.77
UBDP1-202ENST00000457888 PACS2Q86VP3 889 aa10.17□□□□□ -0.78
UBDP1-202ENST00000457888 EN1Q05925 392 aaPredicted RBP10.16□□□□□ -0.78
UBDP1-202ENST00000457888 NBR1Q14596 966 aa10.15□□□□□ -0.78
UBDP1-202ENST00000457888 TSKSQ9UJT2 592 aa10.15□□□□□ -0.78
UBDP1-202ENST00000457888 MAP3K7O43318 606 aa10.14□□□□□ -0.79
UBDP1-202ENST00000457888 TSR1Q2NL82 804 aaKnown RBP10.14□□□□□ -0.79
UBDP1-202ENST00000457888 PPP4CP60510 307 aa10.13□□□□□ -0.79
UBDP1-202ENST00000457888 LAPTM4AQ15012 233 aa10.13□□□□□ -0.79
UBDP1-202ENST00000457888 PDIA6Q15084 440 aa10.12□□□□□ -0.79
UBDP1-202ENST00000457888 TJAP1Q5JTD0 557 aa10.09□□□□□ -0.79
UBDP1-202ENST00000457888 CDCA7LQ96GN5 454 aa10.09□□□□□ -0.79
UBDP1-202ENST00000457888 SPDYE16A6NNV3 312 aaPredicted RBP10.08□□□□□ -0.8
UBDP1-202ENST00000457888 GFRA3O60609 400 aa10.08□□□□□ -0.8
UBDP1-202ENST00000457888 SAMD7Q7Z3H4 446 aa10.08□□□□□ -0.8
UBDP1-202ENST00000457888 SMAPO00193 183 aa10.07□□□□□ -0.8
UBDP1-202ENST00000457888 PRSS12P56730 875 aa10.07□□□□□ -0.8
UBDP1-202ENST00000457888 LCE2BO14633 110 aa10.05□□□□□ -0.8
UBDP1-202ENST00000457888 CERKQ8TCT0 537 aa10.05□□□□□ -0.8
UBDP1-202ENST00000457888 FAM198AQ9UFP1 575 aa10.05□□□□□ -0.8
UBDP1-202ENST00000457888 TRAF7Q6Q0C0 670 aa10.04□□□□□ -0.8
UBDP1-202ENST00000457888 MTRQ99707 1265 aa10.04□□□□□ -0.8
UBDP1-202ENST00000457888 PRKD2Q9BZL6 878 aa10.04□□□□□ -0.8
UBDP1-202ENST00000457888 IL21Q9HBE4 155 aa10.04□□□□□ -0.8
UBDP1-202ENST00000457888 NBPF26B4DH59 902 aa10.03□□□□□ -0.8
UBDP1-202ENST00000457888 TATDN2Q93075 761 aa10.03□□□□□ -0.8
UBDP1-202ENST00000457888 C3orf80F5H4A9 247 aa10.02□□□□□ -0.81
UBDP1-202ENST00000457888 PRIM1P49642 420 aaKnown RBP10.02□□□□□ -0.81
UBDP1-202ENST00000457888 BBXQ8WY36 941 aaPredicted RBP10.02□□□□□ -0.81
UBDP1-202ENST00000457888 PNMA3Q9UL41 463 aa10.02□□□□□ -0.81
UBDP1-202ENST00000457888 PPP1R18Q6NYC8 613 aa10.01□□□□□ -0.81
UBDP1-202ENST00000457888 GRXCR2A6NFK2 248 aa10□□□□□ -0.81
UBDP1-202ENST00000457888 NRG2O14511 850 aaPredicted RBP10□□□□□ -0.81
UBDP1-202ENST00000457888 HDGFP51858 240 aaKnown RBP9.99□□□□□ -0.81
UBDP1-202ENST00000457888 V9GY48 417 aaPredicted RBP9.99□□□□□ -0.81
UBDP1-202ENST00000457888 RNF40O75150 1001 aa9.98□□□□□ -0.81
UBDP1-202ENST00000457888 E2F4Q16254 413 aa9.98□□□□□ -0.81
UBDP1-202ENST00000457888 ZNF516Q92618 1163 aa9.98□□□□□ -0.81
UBDP1-202ENST00000457888 NUDT18Q6ZVK8 323 aa9.97□□□□□ -0.81
UBDP1-202ENST00000457888 CDHR5Q9HBB8 845 aa9.97□□□□□ -0.81
UBDP1-202ENST00000457888 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.97□□□□□ -0.81
UBDP1-202ENST00000457888 ARIH1Q9Y4X5 557 aaPredicted RBP9.97□□□□□ -0.81
UBDP1-202ENST00000457888 APLP1P51693 650 aa9.96□□□□□ -0.82
UBDP1-202ENST00000457888 RBM27Q9P2N5 1060 aaKnown RBP9.95□□□□□ -0.82
UBDP1-202ENST00000457888 OSBPP22059 807 aa9.94□□□□□ -0.82
UBDP1-202ENST00000457888 NECTIN2Q92692 538 aa9.93□□□□□ -0.82
UBDP1-202ENST00000457888 SPRYD3Q8NCJ5 442 aa9.92□□□□□ -0.82
UBDP1-202ENST00000457888 NKX2-3Q8TAU0 364 aa9.92□□□□□ -0.82
UBDP1-202ENST00000457888 WDR70Q9NW82 654 aa9.91□□□□□ -0.82
UBDP1-202ENST00000457888 GGCXP38435 758 aa9.9□□□□□ -0.82
UBDP1-202ENST00000457888 SWT1Q5T5J6 900 aaKnown RBP9.9□□□□□ -0.82
UBDP1-202ENST00000457888 PDZRN3Q9UPQ7 1066 aa9.9□□□□□ -0.82
UBDP1-202ENST00000457888 COPS2P61201 443 aa9.89□□□□□ -0.83
UBDP1-202ENST00000457888 SLF2Q8IX21 1173 aa9.89□□□□□ -0.83
UBDP1-202ENST00000457888 TTC13Q8NBP0 860 aa9.89□□□□□ -0.83
UBDP1-202ENST00000457888 PADI6Q6TGC4 694 aa9.88□□□□□ -0.83
UBDP1-202ENST00000457888 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.87□□□□□ -0.83
UBDP1-202ENST00000457888 SLC4A3P48751 1232 aa9.86□□□□□ -0.83
UBDP1-202ENST00000457888 TMUB1Q9BVT8 246 aa9.86□□□□□ -0.83
UBDP1-202ENST00000457888 NPDC1Q9NQX5 325 aaPredicted RBP9.86□□□□□ -0.83
UBDP1-202ENST00000457888 ZNF787Q6DD87 383 aa9.85□□□□□ -0.83
UBDP1-202ENST00000457888 ZPR1O75312 459 aa9.84□□□□□ -0.83
UBDP1-202ENST00000457888 EYA1Q99502 592 aa9.82□□□□□ -0.84
UBDP1-202ENST00000457888 PRR14Q9BWN1 585 aa9.82□□□□□ -0.84
UBDP1-202ENST00000457888 PCDHB3Q9Y5E6 796 aa9.8□□□□□ -0.84
UBDP1-202ENST00000457888 CFAP44Q96MT7 982 aa9.78□□□□□ -0.84
UBDP1-202ENST00000457888 RNF223E7ERA6 249 aa9.77□□□□□ -0.85
UBDP1-202ENST00000457888 SLC19A1P41440 591 aa9.77□□□□□ -0.85
UBDP1-202ENST00000457888 BLOC1S3Q6QNY0 202 aa9.77□□□□□ -0.85
UBDP1-202ENST00000457888 TRIM67Q6ZTA4 783 aa9.77□□□□□ -0.85
UBDP1-202ENST00000457888 PAXIP1Q6ZW49 1069 aaPredicted RBP9.77□□□□□ -0.85
UBDP1-202ENST00000457888 EMID1Q96A84 441 aaPredicted RBP9.75□□□□□ -0.85
UBDP1-202ENST00000457888 ZNF775Q96BV0 537 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms