RNA–Protein interactions for RNA: ENST00000457566.1

RFX3-AS1-203, RFX3 antisense RNA 1, humanhuman

TSL 3

Gene RFX3-AS1, Length 496 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-203ENST00000457566 A0A0G2JS52 829 aa7.86□□□□□ -1.15
RFX3-AS1-203ENST00000457566 PTPREP23469 700 aa7.86□□□□□ -1.15
RFX3-AS1-203ENST00000457566 LMOD2Q6P5Q4 547 aa7.86□□□□□ -1.15
RFX3-AS1-203ENST00000457566 BRPF1P55201 1214 aaPredicted RBP7.85□□□□□ -1.15
RFX3-AS1-203ENST00000457566 WNT2BQ93097 391 aa7.85□□□□□ -1.15
RFX3-AS1-203ENST00000457566 MRPL50Q8N5N7 158 aaKnown RBP7.84□□□□□ -1.15
RFX3-AS1-203ENST00000457566 UPF1Q92900 1129 aaKnown RBP eCLIP7.84□□□□□ -1.15
RFX3-AS1-203ENST00000457566 FOSBP53539 338 aa7.83□□□□□ -1.16
RFX3-AS1-203ENST00000457566 ZBED2Q9BTP6 218 aa7.83□□□□□ -1.16
RFX3-AS1-203ENST00000457566 NBPF3Q9H094 633 aa7.82□□□□□ -1.16
RFX3-AS1-203ENST00000457566 ANO8Q9HCE9 1232 aaPredicted RBP7.81□□□□□ -1.16
RFX3-AS1-203ENST00000457566 JPH4Q96JJ6 628 aa7.8□□□□□ -1.16
RFX3-AS1-203ENST00000457566 CRISPLD2Q9H0B8 497 aa7.8□□□□□ -1.16
RFX3-AS1-203ENST00000457566 PPP1R15BQ5SWA1 713 aa7.79□□□□□ -1.16
RFX3-AS1-203ENST00000457566 ZDHHC16Q969W1 377 aa7.79□□□□□ -1.16
RFX3-AS1-203ENST00000457566 WDR70Q9NW82 654 aa7.79□□□□□ -1.16
RFX3-AS1-203ENST00000457566 KCNV2Q8TDN2 545 aa7.77□□□□□ -1.17
RFX3-AS1-203ENST00000457566 EVI5O60447 810 aa7.76□□□□□ -1.17
RFX3-AS1-203ENST00000457566 ADAM33Q9BZ11 813 aa7.76□□□□□ -1.17
RFX3-AS1-203ENST00000457566 SUPT5HO00267 1087 aaKnown RBP7.75□□□□□ -1.17
RFX3-AS1-203ENST00000457566 ITGBL1O95965 494 aaPredicted RBP7.75□□□□□ -1.17
RFX3-AS1-203ENST00000457566 PDE4AP27815 886 aa7.75□□□□□ -1.17
RFX3-AS1-203ENST00000457566 RANGAP1P46060 587 aaPredicted RBP7.74□□□□□ -1.17
RFX3-AS1-203ENST00000457566 PODXL2Q9NZ53 605 aa7.74□□□□□ -1.17
RFX3-AS1-203ENST00000457566 RABGEF1Q9UJ41 708 aa7.74□□□□□ -1.17
RFX3-AS1-203ENST00000457566 NEUROD2Q15784 382 aa7.73□□□□□ -1.17
RFX3-AS1-203ENST00000457566 ANKK1Q8NFD2 765 aa7.73□□□□□ -1.17
RFX3-AS1-203ENST00000457566 ZC3H15Q8WU90 426 aaKnown RBP7.73□□□□□ -1.17
RFX3-AS1-203ENST00000457566 PPP1R3GB7ZBB8 358 aa7.72□□□□□ -1.17
RFX3-AS1-203ENST00000457566 NYAP1Q6ZVC0 841 aa7.71□□□□□ -1.18
RFX3-AS1-203ENST00000457566 ARHGEF1Q92888 912 aaKnown RBP7.71□□□□□ -1.18
RFX3-AS1-203ENST00000457566 NCKAP5LQ9HCH0 1330 aa7.71□□□□□ -1.18
RFX3-AS1-203ENST00000457566 MAP3K9P80192 1104 aa7.7□□□□□ -1.18
RFX3-AS1-203ENST00000457566 Q6ZNB5 142 aa7.7□□□□□ -1.18
RFX3-AS1-203ENST00000457566 CADPS2Q86UW7 1296 aa7.7□□□□□ -1.18
RFX3-AS1-203ENST00000457566 LAPTM4BQ86VI4 370 aa7.7□□□□□ -1.18
RFX3-AS1-203ENST00000457566 SOWAHBA6NEL2 793 aa7.68□□□□□ -1.18
RFX3-AS1-203ENST00000457566 DDX27Q96GQ7 796 aaKnown RBP7.68□□□□□ -1.18
RFX3-AS1-203ENST00000457566 PROX2Q3B8N5 592 aa7.67□□□□□ -1.18
RFX3-AS1-203ENST00000457566 FBXW7Q969H0 707 aa7.67□□□□□ -1.18
RFX3-AS1-203ENST00000457566 PCDHGA10Q9Y5H3 936 aa7.67□□□□□ -1.18
RFX3-AS1-203ENST00000457566 ONECUT3O60422 494 aaPredicted RBP7.66□□□□□ -1.18
RFX3-AS1-203ENST00000457566 BCAMP50895 628 aa7.66□□□□□ -1.18
RFX3-AS1-203ENST00000457566 KCNC4Q03721 635 aa7.66□□□□□ -1.18
RFX3-AS1-203ENST00000457566 LARP6Q9BRS8 491 aaKnown RBP7.66□□□□□ -1.18
RFX3-AS1-203ENST00000457566 SLC24A3Q9HC58 644 aa7.66□□□□□ -1.18
RFX3-AS1-203ENST00000457566 TESPA1A2RU30 521 aaPredicted RBP7.65□□□□□ -1.18
RFX3-AS1-203ENST00000457566 COL9A1P20849 921 aa7.65□□□□□ -1.18
RFX3-AS1-203ENST00000457566 LAPTM4AQ15012 233 aa7.65□□□□□ -1.18
RFX3-AS1-203ENST00000457566 TYW1BQ6NUM6 668 aa7.65□□□□□ -1.18
RFX3-AS1-203ENST00000457566 ZFRQ96KR1 1074 aaKnown RBP7.65□□□□□ -1.18
RFX3-AS1-203ENST00000457566 PHF14O94880 888 aa7.64□□□□□ -1.19
RFX3-AS1-203ENST00000457566 ZMYND15Q9H091 742 aa7.64□□□□□ -1.19
RFX3-AS1-203ENST00000457566 ZMYND10O75800 440 aa7.63□□□□□ -1.19
RFX3-AS1-203ENST00000457566 MFSD10Q14728 455 aa7.63□□□□□ -1.19
RFX3-AS1-203ENST00000457566 KIAA1468Q9P260 1216 aa7.63□□□□□ -1.19
RFX3-AS1-203ENST00000457566 WBP1LQ9NX94 342 aa7.62□□□□□ -1.19
RFX3-AS1-203ENST00000457566 UBTFP17480 764 aaKnown RBP7.61□□□□□ -1.19
RFX3-AS1-203ENST00000457566 SMYD5Q6GMV2 418 aa7.61□□□□□ -1.19
RFX3-AS1-203ENST00000457566 RSPH6AQ9H0K4 717 aa7.61□□□□□ -1.19
RFX3-AS1-203ENST00000457566 EMILIN3Q9NT22 766 aa7.61□□□□□ -1.19
RFX3-AS1-203ENST00000457566 E2F4Q16254 413 aa7.6□□□□□ -1.19
RFX3-AS1-203ENST00000457566 TSR3Q9UJK0 312 aaKnown RBP7.59□□□□□ -1.19
RFX3-AS1-203ENST00000457566 FAM98CQ17RN3 349 aaKnown RBP7.58□□□□□ -1.2
RFX3-AS1-203ENST00000457566 EPAS1Q99814 870 aa7.58□□□□□ -1.2
RFX3-AS1-203ENST00000457566 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.58□□□□□ -1.2
RFX3-AS1-203ENST00000457566 TRIM6-TRIM34B2RNG4 842 aa7.57□□□□□ -1.2
RFX3-AS1-203ENST00000457566 TRIM26Q12899 539 aaPredicted RBP7.57□□□□□ -1.2
RFX3-AS1-203ENST00000457566 C6orf132Q5T0Z8 1188 aa7.57□□□□□ -1.2
RFX3-AS1-203ENST00000457566 BARGINQ6ZT62 677 aa7.57□□□□□ -1.2
RFX3-AS1-203ENST00000457566 LRCH3Q96II8 777 aa7.57□□□□□ -1.2
RFX3-AS1-203ENST00000457566 SEPT9Q9UHD8 586 aaPredicted RBP7.57□□□□□ -1.2
RFX3-AS1-203ENST00000457566 SEMA3EO15041 775 aa7.56□□□□□ -1.2
RFX3-AS1-203ENST00000457566 TRAF7Q6Q0C0 670 aa7.56□□□□□ -1.2
RFX3-AS1-203ENST00000457566 GFRA3O60609 400 aa7.55□□□□□ -1.2
RFX3-AS1-203ENST00000457566 HPS5Q9UPZ3 1129 aa7.55□□□□□ -1.2
RFX3-AS1-203ENST00000457566 AK7Q96M32 723 aa7.54□□□□□ -1.2
RFX3-AS1-203ENST00000457566 ARIH1Q9Y4X5 557 aaPredicted RBP7.54□□□□□ -1.2
RFX3-AS1-203ENST00000457566 PPP4CP60510 307 aa7.52□□□□□ -1.21
RFX3-AS1-203ENST00000457566 LCE2BO14633 110 aa7.51□□□□□ -1.21
RFX3-AS1-203ENST00000457566 HRCP23327 699 aa7.51□□□□□ -1.21
RFX3-AS1-203ENST00000457566 NPM2Q86SE8 214 aaKnown RBP7.51□□□□□ -1.21
RFX3-AS1-203ENST00000457566 PACS2Q86VP3 889 aa7.51□□□□□ -1.21
RFX3-AS1-203ENST00000457566 NRG2O14511 850 aaPredicted RBP7.5□□□□□ -1.21
RFX3-AS1-203ENST00000457566 CAMK2BQ13554 666 aa7.49□□□□□ -1.21
RFX3-AS1-203ENST00000457566 RBM33Q96EV2 1170 aaKnown RBP7.49□□□□□ -1.21
RFX3-AS1-203ENST00000457566 PRKD2Q9BZL6 878 aa7.49□□□□□ -1.21
RFX3-AS1-203ENST00000457566 V9GY48 417 aaPredicted RBP7.48□□□□□ -1.21
RFX3-AS1-203ENST00000457566 DPYSL4O14531 572 aa7.47□□□□□ -1.21
RFX3-AS1-203ENST00000457566 TJAP1Q5JTD0 557 aa7.47□□□□□ -1.21
RFX3-AS1-203ENST00000457566 KDM4CQ9H3R0 1056 aa7.46□□□□□ -1.22
RFX3-AS1-203ENST00000457566 TSKSQ9UJT2 592 aa7.46□□□□□ -1.22
RFX3-AS1-203ENST00000457566 PPP1R18Q6NYC8 613 aa7.45□□□□□ -1.22
RFX3-AS1-203ENST00000457566 IL27Q8NEV9 243 aa7.45□□□□□ -1.22
RFX3-AS1-203ENST00000457566 DDX12PQ92771 950 aa7.45□□□□□ -1.22
RFX3-AS1-203ENST00000457566 IL21Q9HBE4 155 aa7.45□□□□□ -1.22
RFX3-AS1-203ENST00000457566 EN1Q05925 392 aaPredicted RBP7.44□□□□□ -1.22
RFX3-AS1-203ENST00000457566 GPBP1L1Q9HC44 474 aaPredicted RBP7.44□□□□□ -1.22
RFX3-AS1-203ENST00000457566 MAP3K7O43318 606 aa7.43□□□□□ -1.22
RFX3-AS1-203ENST00000457566 SAMD7Q7Z3H4 446 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms