RNA–Protein interactions for RNA: ENST00000457482.7

TCF4-204, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-204ENST00000457482 ADGRL1O94910 1474 aa16.12■□□□□ 0.17
TCF4-204ENST00000457482 ERBINQ96RT1 1412 aa16.12■□□□□ 0.17
TCF4-204ENST00000457482 SCAPERQ9BY12 1400 aa16.12■□□□□ 0.17
TCF4-204ENST00000457482 IQGAP3Q86VI3 1631 aa16.11■□□□□ 0.17
TCF4-204ENST00000457482 ZNF326Q5BKZ1 582 aaKnown RBP16.09■□□□□ 0.17
TCF4-204ENST00000457482 EIF4G2P78344 907 aaKnown RBP eCLIP16.09■□□□□ 0.17
TCF4-204ENST00000457482 RTEL1-TNFRSF6BF6WH68 1400 aa16.09■□□□□ 0.17
TCF4-204ENST00000457482 INO80Q9ULG1 1556 aaPredicted RBP16.08■□□□□ 0.17
TCF4-204ENST00000457482 MAGI2Q86UL8 1455 aa16.08■□□□□ 0.17
TCF4-204ENST00000457482 ATP7AQ04656 1500 aa16.08■□□□□ 0.16
TCF4-204ENST00000457482 CENPBP07199 599 aaPredicted RBP16.08■□□□□ 0.16
TCF4-204ENST00000457482 PLA2R1Q13018 1463 aa16.07■□□□□ 0.16
TCF4-204ENST00000457482 CYB5RLQ6IPT4 315 aa16.07■□□□□ 0.16
TCF4-204ENST00000457482 CD109Q6YHK3 1445 aa16.07■□□□□ 0.16
TCF4-204ENST00000457482 MYT1LQ9UL68 1186 aa16.06■□□□□ 0.16
TCF4-204ENST00000457482 WASHC2AQ641Q2 1341 aa16.05■□□□□ 0.16
TCF4-204ENST00000457482 CNKSR2Q8WXI2 1034 aa16.05■□□□□ 0.16
TCF4-204ENST00000457482 C11orf95C9JLR9 678 aaPredicted RBP16.04■□□□□ 0.16
TCF4-204ENST00000457482 C1QBPQ07021 282 aaKnown RBP16.04■□□□□ 0.16
TCF4-204ENST00000457482 KDM2AQ9Y2K7 1162 aa16.04■□□□□ 0.16
TCF4-204ENST00000457482 RIMBP3CA6NJZ7 1639 aa16.04■□□□□ 0.16
TCF4-204ENST00000457482 RIMBP3BA6NNM3 1639 aa16.04■□□□□ 0.16
TCF4-204ENST00000457482 RIMBP3Q9UFD9 1639 aa16.04■□□□□ 0.16
TCF4-204ENST00000457482 KIDINS220Q9ULH0 1771 aa16.03■□□□□ 0.16
TCF4-204ENST00000457482 RNF216Q9NWF9 866 aaPredicted RBP16.02■□□□□ 0.16
TCF4-204ENST00000457482 CCDC144AA2RUR9 1427 aa16.02■□□□□ 0.16
TCF4-204ENST00000457482 SPATA31E1Q6ZUB1 1445 aa16.02■□□□□ 0.16
TCF4-204ENST00000457482 DCAF11Q8TEB1 546 aa16.02■□□□□ 0.15
TCF4-204ENST00000457482 DEPDC5O75140 1603 aa16■□□□□ 0.15
TCF4-204ENST00000457482 E9PCH4 1651 aa16■□□□□ 0.15
TCF4-204ENST00000457482 RGL3Q3MIN7 710 aa16■□□□□ 0.15
TCF4-204ENST00000457482 UHRF1BP1Q6BDS2 1440 aa16■□□□□ 0.15
TCF4-204ENST00000457482 KIF3BO15066 747 aa15.99■□□□□ 0.15
TCF4-204ENST00000457482 ZNF518AQ6AHZ1 1483 aa15.99■□□□□ 0.15
TCF4-204ENST00000457482 CFAP74Q9C0B2 1584 aa15.97■□□□□ 0.15
TCF4-204ENST00000457482 DHX29Q7Z478 1369 aaKnown RBP15.97■□□□□ 0.15
TCF4-204ENST00000457482 POGZQ7Z3K3 1410 aa15.97■□□□□ 0.15
TCF4-204ENST00000457482 USP47Q96K76 1375 aa15.96■□□□□ 0.15
TCF4-204ENST00000457482 RALGAPBQ86X10 1494 aa15.96■□□□□ 0.15
TCF4-204ENST00000457482 MROH1Q8NDA8 1641 aa15.96■□□□□ 0.14
TCF4-204ENST00000457482 CCDC7Q96M83 1385 aa15.95■□□□□ 0.14
TCF4-204ENST00000457482 KDM5CP41229 1560 aa15.95■□□□□ 0.14
TCF4-204ENST00000457482 ANP32CO43423 234 aa15.95■□□□□ 0.14
TCF4-204ENST00000457482 ATP10AO60312 1499 aa15.95■□□□□ 0.14
TCF4-204ENST00000457482 A2MP01023 1474 aa15.95■□□□□ 0.14
TCF4-204ENST00000457482 BCORL1Q5H9F3 1711 aa15.94■□□□□ 0.14
TCF4-204ENST00000457482 RAPGEF3O95398 923 aa15.94■□□□□ 0.14
TCF4-204ENST00000457482 VWDEQ8N2E2 1590 aa15.94■□□□□ 0.14
TCF4-204ENST00000457482 EIF2AK4Q9P2K8 1649 aaKnown RBP15.93■□□□□ 0.14
TCF4-204ENST00000457482 KIF7Q2M1P5 1343 aa15.93■□□□□ 0.14
TCF4-204ENST00000457482 POLR1AO95602 1720 aaPredicted RBP15.93■□□□□ 0.14
TCF4-204ENST00000457482 TET3O43151 1660 aa15.92■□□□□ 0.14
TCF4-204ENST00000457482 CARD11Q9BXL7 1154 aa15.92■□□□□ 0.14
TCF4-204ENST00000457482 MAP3K4Q9Y6R4 1608 aa15.92■□□□□ 0.14
TCF4-204ENST00000457482 PRDM15P57071 1507 aaPredicted RBP15.92■□□□□ 0.14
TCF4-204ENST00000457482 SPHKAPQ2M3C7 1700 aa15.92■□□□□ 0.14
TCF4-204ENST00000457482 PRAG1Q86YV5 1406 aa15.91■□□□□ 0.14
TCF4-204ENST00000457482 HECW2Q9P2P5 1572 aa15.91■□□□□ 0.14
TCF4-204ENST00000457482 FRMPD1Q5SYB0 1578 aa15.91■□□□□ 0.14
TCF4-204ENST00000457482 NEO1Q92859 1461 aa15.9■□□□□ 0.14
TCF4-204ENST00000457482 GTF3C3Q9Y5Q9 886 aa15.9■□□□□ 0.14
TCF4-204ENST00000457482 ABCA6Q8N139 1617 aa15.9■□□□□ 0.14
TCF4-204ENST00000457482 KANK1Q14678 1352 aa15.9■□□□□ 0.14
TCF4-204ENST00000457482 MLH3Q9UHC1 1453 aa15.9■□□□□ 0.14
TCF4-204ENST00000457482 TRPM1Q7Z4N2 1603 aa15.9■□□□□ 0.14
TCF4-204ENST00000457482 CNTLNQ9NXG0 1405 aa15.89■□□□□ 0.13
TCF4-204ENST00000457482 TRPM2O94759 1503 aa15.89■□□□□ 0.13
TCF4-204ENST00000457482 NBPF1Q3BBV0 1214 aa15.89■□□□□ 0.13
TCF4-204ENST00000457482 ROCK2O75116 1388 aaKnown RBP15.88■□□□□ 0.13
TCF4-204ENST00000457482 CLTCL1P53675 1640 aa15.88■□□□□ 0.13
TCF4-204ENST00000457482 PTPRTO14522 1441 aa15.88■□□□□ 0.13
TCF4-204ENST00000457482 CEP152O94986 1710 aa15.88■□□□□ 0.13
TCF4-204ENST00000457482 FAM69CQ0P6D2 419 aa15.86■□□□□ 0.13
TCF4-204ENST00000457482 RICTORQ6R327 1708 aa15.86■□□□□ 0.13
TCF4-204ENST00000457482 PPRC1Q5VV67 1664 aaKnown RBP15.86■□□□□ 0.13
TCF4-204ENST00000457482 ST20-MTHFSA0A0A6YYL1 179 aa15.86■□□□□ 0.13
TCF4-204ENST00000457482 CCER2I3L3R5 266 aa15.86■□□□□ 0.13
TCF4-204ENST00000457482 RNF17Q9BXT8 1623 aaKnown RBP15.85■□□□□ 0.13
TCF4-204ENST00000457482 TSPOAP1O95153 1857 aa15.85■□□□□ 0.13
TCF4-204ENST00000457482 GLI2P10070 1586 aa15.85■□□□□ 0.13
TCF4-204ENST00000457482 UGGT1Q9NYU2 1555 aa15.85■□□□□ 0.13
TCF4-204ENST00000457482 POLR3GLQ9BT43 218 aa15.85■□□□□ 0.13
TCF4-204ENST00000457482 CFAP65Q6ZU64 1925 aaKnown RBP15.85■□□□□ 0.13
TCF4-204ENST00000457482 DIP2BQ9P265 1576 aa15.85■□□□□ 0.13
TCF4-204ENST00000457482 GGT6Q6P531 493 aa15.84■□□□□ 0.13
TCF4-204ENST00000457482 EFCAB6Q5THR3 1501 aa15.84■□□□□ 0.13
TCF4-204ENST00000457482 DIP2CQ9Y2E4 1556 aa15.82■□□□□ 0.12
TCF4-204ENST00000457482 YEATS2Q9ULM3 1422 aa15.81■□□□□ 0.12
TCF4-204ENST00000457482 GPRASP1Q5JY77 1395 aa15.8■□□□□ 0.12
TCF4-204ENST00000457482 LMTK2Q8IWU2 1503 aa15.79■□□□□ 0.12
TCF4-204ENST00000457482 MADDQ8WXG6 1647 aa15.79■□□□□ 0.12
TCF4-204ENST00000457482 CCDC184Q52MB2 194 aa15.78■□□□□ 0.12
TCF4-204ENST00000457482 MYT1Q01538 1121 aa15.77■□□□□ 0.12
TCF4-204ENST00000457482 PRKRIP1Q9H875 184 aaPredicted RBP15.77■□□□□ 0.12
TCF4-204ENST00000457482 NPATQ14207 1427 aa15.77■□□□□ 0.11
TCF4-204ENST00000457482 MROH2AA6NES4 1674 aa15.77■□□□□ 0.11
TCF4-204ENST00000457482 ABCC3O15438 1527 aa15.76■□□□□ 0.11
TCF4-204ENST00000457482 LAMC1P11047 1609 aa15.76■□□□□ 0.11
TCF4-204ENST00000457482 CNGB1Q14028 1251 aaPredicted RBP15.76■□□□□ 0.11
TCF4-204ENST00000457482 KIF1BO60333 1816 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms