RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 MIA2Q96PC5 1412 aa34.32■■■■□ 3.08
SEC22C-213ENST00000456222 KDM5DQ9BY66 1539 aa34.3■■■■□ 3.08
SEC22C-213ENST00000456222 NCKAP5LQ9HCH0 1330 aa34.27■■■■□ 3.08
SEC22C-213ENST00000456222 FBXO31Q5XUX0 539 aaPredicted RBP34.26■■■■□ 3.08
SEC22C-213ENST00000456222 FAM135AQ9P2D6 1515 aa34.24■■■■□ 3.07
SEC22C-213ENST00000456222 PZPP20742 1482 aa34.23■■■■□ 3.07
SEC22C-213ENST00000456222 LTBP4Q8N2S1 1624 aa34.22■■■■□ 3.07
SEC22C-213ENST00000456222 RNF17Q9BXT8 1623 aaKnown RBP34.22■■■■□ 3.07
SEC22C-213ENST00000456222 WASHC2CQ9Y4E1 1318 aa34.22■■■■□ 3.07
SEC22C-213ENST00000456222 PLA2R1Q13018 1463 aa34.2■■■■□ 3.07
SEC22C-213ENST00000456222 DNMT1P26358 1616 aaKnown RBP34.2■■■■□ 3.07
SEC22C-213ENST00000456222 A2ML1A8K2U0 1454 aa34.2■■■■□ 3.06
SEC22C-213ENST00000456222 PTPN23Q9H3S7 1636 aa34.19■■■■□ 3.06
SEC22C-213ENST00000456222 TCOF1Q13428 1488 aaKnown RBP34.19■■■■□ 3.06
SEC22C-213ENST00000456222 APLP2Q06481 763 aa34.18■■■■□ 3.06
SEC22C-213ENST00000456222 TNRQ92752 1358 aa34.18■■■■□ 3.06
SEC22C-213ENST00000456222 CROCC2H7BZ55 1655 aa34.17■■■■□ 3.06
SEC22C-213ENST00000456222 MROH1Q8NDA8 1641 aa34.17■■■■□ 3.06
SEC22C-213ENST00000456222 EIF2AK4Q9P2K8 1649 aaKnown RBP34.16■■■■□ 3.06
SEC22C-213ENST00000456222 ABCC5O15440 1437 aa34.15■■■■□ 3.06
SEC22C-213ENST00000456222 ABCC3O15438 1527 aa34.14■■■■□ 3.06
SEC22C-213ENST00000456222 FGD6Q6ZV73 1430 aa34.11■■■■□ 3.05
SEC22C-213ENST00000456222 PKD2Q13563 968 aa34.1■■■■□ 3.05
SEC22C-213ENST00000456222 DUOX2Q9NRD8 1548 aa34.09■■■■□ 3.05
SEC22C-213ENST00000456222 SHANK2Q9UPX8 1470 aa34.09■■■■□ 3.05
SEC22C-213ENST00000456222 CEP152O94986 1710 aa34.08■■■■□ 3.05
SEC22C-213ENST00000456222 ZC3H13Q5T200 1668 aaKnown RBP34.08■■■■□ 3.05
SEC22C-213ENST00000456222 ZNF335Q9H4Z2 1342 aaPredicted RBP34.07■■■■□ 3.05
SEC22C-213ENST00000456222 DAPK1P53355 1430 aa34.06■■■■□ 3.04
SEC22C-213ENST00000456222 KIF15Q9NS87 1388 aa34.06■■■■□ 3.04
SEC22C-213ENST00000456222 RRP7BPQ9NSQ0 103 aa34.03■■■■□ 3.04
SEC22C-213ENST00000456222 POLR1AO95602 1720 aaPredicted RBP34.03■■■■□ 3.04
SEC22C-213ENST00000456222 CFAP65Q6ZU64 1925 aaKnown RBP34.02■■■■□ 3.04
SEC22C-213ENST00000456222 NEURL4Q96JN8 1562 aa34.02■■■■□ 3.04
SEC22C-213ENST00000456222 NLRP1Q9C000 1473 aa34.01■■■■□ 3.03
SEC22C-213ENST00000456222 SPATA31D1Q6ZQQ2 1576 aa34■■■■□ 3.03
SEC22C-213ENST00000456222 ERVK-7P63135 1459 aa33.98■■■■□ 3.03
SEC22C-213ENST00000456222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.98■■■■□ 3.03
SEC22C-213ENST00000456222 PRDM15P57071 1507 aaPredicted RBP33.97■■■■□ 3.03
SEC22C-213ENST00000456222 UGGT1Q9NYU2 1555 aa33.97■■■■□ 3.03
SEC22C-213ENST00000456222 ERBINQ96RT1 1412 aa33.96■■■■□ 3.03
SEC22C-213ENST00000456222 IQSEC2Q5JU85 1478 aa33.95■■■■□ 3.03
SEC22C-213ENST00000456222 CHIC2Q9UKJ5 165 aa33.94■■■■□ 3.02
SEC22C-213ENST00000456222 DEPDC5O75140 1603 aa33.92■■■■□ 3.02
SEC22C-213ENST00000456222 THEMISQ8N1K5 641 aaPredicted RBP33.89■■■■□ 3.02
SEC22C-213ENST00000456222 ANKLE2Q86XL3 938 aa33.86■■■■□ 3.01
SEC22C-213ENST00000456222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.86■■■■□ 3.01
SEC22C-213ENST00000456222 ANKRD30AQ9BXX3 1397 aa33.85■■■■□ 3.01
SEC22C-213ENST00000456222 ARHGAP31Q2M1Z3 1444 aa33.83■■■■□ 3.01
SEC22C-213ENST00000456222 UBR1Q8IWV7 1749 aa33.82■■■■□ 3
SEC22C-213ENST00000456222 FAM50AQ14320 339 aaKnown RBP33.82■■■■□ 3
SEC22C-213ENST00000456222 MED14O60244 1454 aa33.81■■■■□ 3
SEC22C-213ENST00000456222 ADGRL2O95490 1459 aa33.81■■■■□ 3
SEC22C-213ENST00000456222 NPHP4O75161 1426 aaPredicted RBP33.79■■■■□ 3
SEC22C-213ENST00000456222 VWDEQ8N2E2 1590 aa33.79■■■■□ 3
SEC22C-213ENST00000456222 IQGAP1P46940 1657 aa33.77■■■■□ 3
SEC22C-213ENST00000456222 UBAP1LF5GYI3 381 aa33.74■■■□□ 2.99
SEC22C-213ENST00000456222 LMTK2Q8IWU2 1503 aa33.74■■■□□ 2.99
SEC22C-213ENST00000456222 KANK1Q14678 1352 aa33.73■■■□□ 2.99
SEC22C-213ENST00000456222 PIK3C2BO00750 1634 aa33.71■■■□□ 2.99
SEC22C-213ENST00000456222 CPS1P31327 1500 aa33.7■■■□□ 2.99
SEC22C-213ENST00000456222 STRCP1A6NGW2 1772 aa33.69■■■□□ 2.98
SEC22C-213ENST00000456222 ARHGAP23Q9P227 1491 aa33.67■■■□□ 2.98
SEC22C-213ENST00000456222 SYNMO15061 1565 aa33.66■■■□□ 2.98
SEC22C-213ENST00000456222 EFCAB6Q5THR3 1501 aa33.66■■■□□ 2.98
SEC22C-213ENST00000456222 SLIT1O75093 1534 aa33.65■■■□□ 2.98
SEC22C-213ENST00000456222 ANKRD50Q9ULJ7 1429 aa33.65■■■□□ 2.98
SEC22C-213ENST00000456222 LTKP29376 864 aa33.65■■■□□ 2.98
SEC22C-213ENST00000456222 SCAF11Q99590 1463 aaKnown RBP33.64■■■□□ 2.98
SEC22C-213ENST00000456222 PPARGC1BQ86YN6 1023 aaKnown RBP33.62■■■□□ 2.97
SEC22C-213ENST00000456222 NOS1P29475 1434 aa33.59■■■□□ 2.97
SEC22C-213ENST00000456222 IDI1Q13907 227 aa33.58■■■□□ 2.97
SEC22C-213ENST00000456222 TXNDC2Q86VQ3 553 aa33.58■■■□□ 2.97
SEC22C-213ENST00000456222 DISP3Q9P2K9 1392 aa33.55■■■□□ 2.96
SEC22C-213ENST00000456222 TMEM2Q9UHN6 1383 aa33.55■■■□□ 2.96
SEC22C-213ENST00000456222 KDM5AP29375 1690 aaKnown RBP33.55■■■□□ 2.96
SEC22C-213ENST00000456222 ALKQ9UM73 1620 aa33.54■■■□□ 2.96
SEC22C-213ENST00000456222 UNC13BO14795 1591 aa33.52■■■□□ 2.96
SEC22C-213ENST00000456222 LRRC7Q96NW7 1537 aa33.52■■■□□ 2.96
SEC22C-213ENST00000456222 TET3O43151 1660 aa33.51■■■□□ 2.95
SEC22C-213ENST00000456222 STAG3Q9UJ98 1225 aa33.5■■■□□ 2.95
SEC22C-213ENST00000456222 PIP4K2BP78356 416 aa33.49■■■□□ 2.95
SEC22C-213ENST00000456222 ADGRB3O60242 1522 aa33.48■■■□□ 2.95
SEC22C-213ENST00000456222 ROCK1Q13464 1354 aa33.48■■■□□ 2.95
SEC22C-213ENST00000456222 SCAF1Q9H7N4 1312 aaKnown RBP33.48■■■□□ 2.95
SEC22C-213ENST00000456222 EID1Q9Y6B2 187 aa33.47■■■□□ 2.95
SEC22C-213ENST00000456222 RPRD2Q5VT52 1461 aaKnown RBP33.46■■■□□ 2.95
SEC22C-213ENST00000456222 TOM1O60784 492 aa33.46■■■□□ 2.95
SEC22C-213ENST00000456222 GCC2Q8IWJ2 1684 aa33.45■■■□□ 2.95
SEC22C-213ENST00000456222 ITGAEP38570 1179 aa33.45■■■□□ 2.95
SEC22C-213ENST00000456222 MYO5BQ9ULV0 1848 aa33.44■■■□□ 2.94
SEC22C-213ENST00000456222 ILDR2Q71H61 639 aa33.44■■■□□ 2.94
SEC22C-213ENST00000456222 HSPA1LP34931 641 aa33.42■■■□□ 2.94
SEC22C-213ENST00000456222 E9PCH4 1651 aa33.41■■■□□ 2.94
SEC22C-213ENST00000456222 XIRP1Q702N8 1843 aaKnown RBP33.41■■■□□ 2.94
SEC22C-213ENST00000456222 SLC52A1Q9NWF4 448 aa33.4■■■□□ 2.94
SEC22C-213ENST00000456222 IQGAP3Q86VI3 1631 aa33.38■■■□□ 2.93
SEC22C-213ENST00000456222 SLC26A8Q96RN1 970 aa33.34■■■□□ 2.93
SEC22C-213ENST00000456222 TMEM131LA2VDJ0 1609 aa33.34■■■□□ 2.93
SEC22C-213ENST00000456222 ZFYVE9O95405 1425 aa33.31■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms