RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 NCOA1Q15788 1441 aa19.49■□□□□ 0.71
SMCR2-201ENST00000456090 CERKQ8TCT0 537 aa19.48■□□□□ 0.71
SMCR2-201ENST00000456090 FAM135AQ9P2D6 1515 aa19.47■□□□□ 0.71
SMCR2-201ENST00000456090 CROCC2H7BZ55 1655 aa19.47■□□□□ 0.71
SMCR2-201ENST00000456090 PTPRTO14522 1441 aa19.47■□□□□ 0.71
SMCR2-201ENST00000456090 PTPN23Q9H3S7 1636 aa19.47■□□□□ 0.71
SMCR2-201ENST00000456090 RNF17Q9BXT8 1623 aaKnown RBP19.46■□□□□ 0.71
SMCR2-201ENST00000456090 EIF2AK4Q9P2K8 1649 aaKnown RBP19.45■□□□□ 0.7
SMCR2-201ENST00000456090 WASHC2CQ9Y4E1 1318 aa19.45■□□□□ 0.7
SMCR2-201ENST00000456090 CFAP65Q6ZU64 1925 aaKnown RBP19.43■□□□□ 0.7
SMCR2-201ENST00000456090 PZPP20742 1482 aa19.42■□□□□ 0.7
SMCR2-201ENST00000456090 ZC3H13Q5T200 1668 aaKnown RBP19.42■□□□□ 0.7
SMCR2-201ENST00000456090 DNMT1P26358 1616 aaKnown RBP19.41■□□□□ 0.7
SMCR2-201ENST00000456090 PLA2R1Q13018 1463 aa19.41■□□□□ 0.7
SMCR2-201ENST00000456090 CEP152O94986 1710 aa19.4■□□□□ 0.7
SMCR2-201ENST00000456090 FBXO31Q5XUX0 539 aaPredicted RBP19.4■□□□□ 0.7
SMCR2-201ENST00000456090 NCKAP5LQ9HCH0 1330 aa19.4■□□□□ 0.7
SMCR2-201ENST00000456090 A2ML1A8K2U0 1454 aa19.4■□□□□ 0.7
SMCR2-201ENST00000456090 FGD6Q6ZV73 1430 aa19.39■□□□□ 0.69
SMCR2-201ENST00000456090 SHANK2Q9UPX8 1470 aa19.39■□□□□ 0.69
SMCR2-201ENST00000456090 DUOX2Q9NRD8 1548 aa19.39■□□□□ 0.69
SMCR2-201ENST00000456090 POLR1AO95602 1720 aaPredicted RBP19.38■□□□□ 0.69
SMCR2-201ENST00000456090 MROH1Q8NDA8 1641 aa19.38■□□□□ 0.69
SMCR2-201ENST00000456090 TNRQ92752 1358 aa19.38■□□□□ 0.69
SMCR2-201ENST00000456090 ABCC3O15438 1527 aa19.37■□□□□ 0.69
SMCR2-201ENST00000456090 TCOF1Q13428 1488 aaKnown RBP19.37■□□□□ 0.69
SMCR2-201ENST00000456090 ABCC5O15440 1437 aa19.37■□□□□ 0.69
SMCR2-201ENST00000456090 LTBP4Q8N2S1 1624 aa19.36■□□□□ 0.69
SMCR2-201ENST00000456090 DAPK1P53355 1430 aa19.35■□□□□ 0.69
SMCR2-201ENST00000456090 PKD2Q13563 968 aa19.35■□□□□ 0.69
SMCR2-201ENST00000456090 KIF15Q9NS87 1388 aa19.34■□□□□ 0.69
SMCR2-201ENST00000456090 NLRP1Q9C000 1473 aa19.31■□□□□ 0.68
SMCR2-201ENST00000456090 RRP7BPQ9NSQ0 103 aa19.31■□□□□ 0.68
SMCR2-201ENST00000456090 ERBINQ96RT1 1412 aa19.31■□□□□ 0.68
SMCR2-201ENST00000456090 PRDM15P57071 1507 aaPredicted RBP19.3■□□□□ 0.68
SMCR2-201ENST00000456090 DEPDC5O75140 1603 aa19.3■□□□□ 0.68
SMCR2-201ENST00000456090 SPATA31D1Q6ZQQ2 1576 aa19.3■□□□□ 0.68
SMCR2-201ENST00000456090 UGGT1Q9NYU2 1555 aa19.29■□□□□ 0.68
SMCR2-201ENST00000456090 NEURL4Q96JN8 1562 aa19.28■□□□□ 0.68
SMCR2-201ENST00000456090 ERVK-7P63135 1459 aa19.28■□□□□ 0.68
SMCR2-201ENST00000456090 ZNF335Q9H4Z2 1342 aaPredicted RBP19.27■□□□□ 0.68
SMCR2-201ENST00000456090 CHIC2Q9UKJ5 165 aa19.27■□□□□ 0.68
SMCR2-201ENST00000456090 IQSEC2Q5JU85 1478 aa19.27■□□□□ 0.67
SMCR2-201ENST00000456090 ANKRD30AQ9BXX3 1397 aa19.26■□□□□ 0.67
SMCR2-201ENST00000456090 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.26■□□□□ 0.67
SMCR2-201ENST00000456090 THEMISQ8N1K5 641 aaPredicted RBP19.25■□□□□ 0.67
SMCR2-201ENST00000456090 UBR1Q8IWV7 1749 aa19.23■□□□□ 0.67
SMCR2-201ENST00000456090 FAM50AQ14320 339 aaKnown RBP19.23■□□□□ 0.67
SMCR2-201ENST00000456090 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.23■□□□□ 0.67
SMCR2-201ENST00000456090 ANKLE2Q86XL3 938 aa19.22■□□□□ 0.67
SMCR2-201ENST00000456090 IQGAP1P46940 1657 aa19.2■□□□□ 0.66
SMCR2-201ENST00000456090 ARHGAP31Q2M1Z3 1444 aa19.2■□□□□ 0.66
SMCR2-201ENST00000456090 ADGRL2O95490 1459 aa19.2■□□□□ 0.66
SMCR2-201ENST00000456090 KANK1Q14678 1352 aa19.19■□□□□ 0.66
SMCR2-201ENST00000456090 VWDEQ8N2E2 1590 aa19.18■□□□□ 0.66
SMCR2-201ENST00000456090 MED14O60244 1454 aa19.17■□□□□ 0.66
SMCR2-201ENST00000456090 NPHP4O75161 1426 aaPredicted RBP19.17■□□□□ 0.66
SMCR2-201ENST00000456090 LMTK2Q8IWU2 1503 aa19.15■□□□□ 0.66
SMCR2-201ENST00000456090 PIK3C2BO00750 1634 aa19.15■□□□□ 0.66
SMCR2-201ENST00000456090 CPS1P31327 1500 aa19.14■□□□□ 0.65
SMCR2-201ENST00000456090 EFCAB6Q5THR3 1501 aa19.13■□□□□ 0.65
SMCR2-201ENST00000456090 ANKRD50Q9ULJ7 1429 aa19.12■□□□□ 0.65
SMCR2-201ENST00000456090 STRCP1A6NGW2 1772 aa19.11■□□□□ 0.65
SMCR2-201ENST00000456090 UBAP1LF5GYI3 381 aa19.11■□□□□ 0.65
SMCR2-201ENST00000456090 KDM5AP29375 1690 aaKnown RBP19.11■□□□□ 0.65
SMCR2-201ENST00000456090 SYNMO15061 1565 aa19.1■□□□□ 0.65
SMCR2-201ENST00000456090 SLIT1O75093 1534 aa19.1■□□□□ 0.65
SMCR2-201ENST00000456090 SCAF11Q99590 1463 aaKnown RBP19.09■□□□□ 0.65
SMCR2-201ENST00000456090 ARHGAP23Q9P227 1491 aa19.09■□□□□ 0.65
SMCR2-201ENST00000456090 PPARGC1BQ86YN6 1023 aaKnown RBP19.08■□□□□ 0.64
SMCR2-201ENST00000456090 TET3O43151 1660 aa19.08■□□□□ 0.64
SMCR2-201ENST00000456090 GCC2Q8IWJ2 1684 aa19.08■□□□□ 0.64
SMCR2-201ENST00000456090 UNC13BO14795 1591 aa19.06■□□□□ 0.64
SMCR2-201ENST00000456090 STAG3Q9UJ98 1225 aa19.06■□□□□ 0.64
SMCR2-201ENST00000456090 MYO5BQ9ULV0 1848 aa19.06■□□□□ 0.64
SMCR2-201ENST00000456090 LTKP29376 864 aa19.05■□□□□ 0.64
SMCR2-201ENST00000456090 TXNDC2Q86VQ3 553 aa19.05■□□□□ 0.64
SMCR2-201ENST00000456090 NOS1P29475 1434 aa19.05■□□□□ 0.64
SMCR2-201ENST00000456090 IDI1Q13907 227 aa19.04■□□□□ 0.64
SMCR2-201ENST00000456090 ROCK1Q13464 1354 aa19.04■□□□□ 0.64
SMCR2-201ENST00000456090 RPRD2Q5VT52 1461 aaKnown RBP19.03■□□□□ 0.64
SMCR2-201ENST00000456090 EID1Q9Y6B2 187 aa19.03■□□□□ 0.64
SMCR2-201ENST00000456090 TMEM2Q9UHN6 1383 aa19.03■□□□□ 0.64
SMCR2-201ENST00000456090 ADGRB3O60242 1522 aa19.02■□□□□ 0.64
SMCR2-201ENST00000456090 ITGAEP38570 1179 aa19.01■□□□□ 0.63
SMCR2-201ENST00000456090 E9PCH4 1651 aa19.01■□□□□ 0.63
SMCR2-201ENST00000456090 IQGAP3Q86VI3 1631 aa19■□□□□ 0.63
SMCR2-201ENST00000456090 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
SMCR2-201ENST00000456090 TOM1O60784 492 aa18.99■□□□□ 0.63
SMCR2-201ENST00000456090 XIRP1Q702N8 1843 aaKnown RBP18.99■□□□□ 0.63
SMCR2-201ENST00000456090 LRRC7Q96NW7 1537 aa18.99■□□□□ 0.63
SMCR2-201ENST00000456090 DISP3Q9P2K9 1392 aa18.98■□□□□ 0.63
SMCR2-201ENST00000456090 PIP4K2BP78356 416 aa18.98■□□□□ 0.63
SMCR2-201ENST00000456090 SLC52A1Q9NWF4 448 aa18.98■□□□□ 0.63
SMCR2-201ENST00000456090 ALKQ9UM73 1620 aa18.96■□□□□ 0.63
SMCR2-201ENST00000456090 TMEM131LA2VDJ0 1609 aa18.94■□□□□ 0.62
SMCR2-201ENST00000456090 NUP155O75694 1391 aa18.92■□□□□ 0.62
SMCR2-201ENST00000456090 RRBP1Q9P2E9 1410 aaKnown RBP18.91■□□□□ 0.62
SMCR2-201ENST00000456090 HSPA1LP34931 641 aa18.89■□□□□ 0.61
SMCR2-201ENST00000456090 SLC26A8Q96RN1 970 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms