RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 ZMYM4Q5VZL5 1548 aa23.47■■□□□ 1.35
TMEM220-202ENST00000455996 DEPDC5O75140 1603 aa23.46■■□□□ 1.35
TMEM220-202ENST00000455996 A2MP01023 1474 aa23.46■■□□□ 1.35
TMEM220-202ENST00000455996 PKD2Q13563 968 aa23.45■■□□□ 1.34
TMEM220-202ENST00000455996 NEUROD1Q13562 356 aa23.44■■□□□ 1.34
TMEM220-202ENST00000455996 TSPOAP1O95153 1857 aa23.44■■□□□ 1.34
TMEM220-202ENST00000455996 ABCA6Q8N139 1617 aa23.43■■□□□ 1.34
TMEM220-202ENST00000455996 FOXD1Q16676 465 aa23.42■■□□□ 1.34
TMEM220-202ENST00000455996 MYT1LQ9UL68 1186 aa23.42■■□□□ 1.34
TMEM220-202ENST00000455996 RPRD2Q5VT52 1461 aaKnown RBP23.41■■□□□ 1.34
TMEM220-202ENST00000455996 VWDEQ8N2E2 1590 aa23.41■■□□□ 1.34
TMEM220-202ENST00000455996 BCORL1Q5H9F3 1711 aa23.4■■□□□ 1.34
TMEM220-202ENST00000455996 DIP2CQ9Y2E4 1556 aa23.4■■□□□ 1.34
TMEM220-202ENST00000455996 PRDM15P57071 1507 aaPredicted RBP23.38■■□□□ 1.33
TMEM220-202ENST00000455996 MROH1Q8NDA8 1641 aa23.38■■□□□ 1.33
TMEM220-202ENST00000455996 RNF17Q9BXT8 1623 aaKnown RBP23.38■■□□□ 1.33
TMEM220-202ENST00000455996 TONSLQ96HA7 1378 aa23.37■■□□□ 1.33
TMEM220-202ENST00000455996 KIF3BO15066 747 aa23.35■■□□□ 1.33
TMEM220-202ENST00000455996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.35■■□□□ 1.33
TMEM220-202ENST00000455996 PPP1R15AO75807 674 aaPredicted RBP23.34■■□□□ 1.33
TMEM220-202ENST00000455996 YEATS2Q9ULM3 1422 aa23.34■■□□□ 1.33
TMEM220-202ENST00000455996 ATP10AO60312 1499 aa23.33■■□□□ 1.33
TMEM220-202ENST00000455996 COL17A1Q9UMD9 1497 aaPredicted RBP23.33■■□□□ 1.33
TMEM220-202ENST00000455996 KANK1Q14678 1352 aa23.33■■□□□ 1.33
TMEM220-202ENST00000455996 LMTK2Q8IWU2 1503 aa23.31■■□□□ 1.32
TMEM220-202ENST00000455996 REREQ9P2R6 1566 aa23.31■■□□□ 1.32
TMEM220-202ENST00000455996 PLA2R1Q13018 1463 aa23.3■■□□□ 1.32
TMEM220-202ENST00000455996 TET3O43151 1660 aa23.29■■□□□ 1.32
TMEM220-202ENST00000455996 PTPRTO14522 1441 aa23.24■■□□□ 1.31
TMEM220-202ENST00000455996 E9PCH4 1651 aa23.24■■□□□ 1.31
TMEM220-202ENST00000455996 L3MBTL2Q969R5 705 aa23.23■■□□□ 1.31
TMEM220-202ENST00000455996 AGLP35573 1532 aa23.23■■□□□ 1.31
TMEM220-202ENST00000455996 ARHGEF40Q8TER5 1519 aa23.22■■□□□ 1.31
TMEM220-202ENST00000455996 EFCAB6Q5THR3 1501 aa23.21■■□□□ 1.31
TMEM220-202ENST00000455996 CCDC144AA2RUR9 1427 aa23.19■■□□□ 1.3
TMEM220-202ENST00000455996 ZNF316A6NFI3 1004 aaPredicted RBP23.19■■□□□ 1.3
TMEM220-202ENST00000455996 ABCC3O15438 1527 aa23.18■■□□□ 1.3
TMEM220-202ENST00000455996 TRPM2O94759 1503 aa23.17■■□□□ 1.3
TMEM220-202ENST00000455996 GGT6Q6P531 493 aa23.15■■□□□ 1.3
TMEM220-202ENST00000455996 TRHP20396 242 aaPredicted RBP23.14■■□□□ 1.29
TMEM220-202ENST00000455996 ZC3H13Q5T200 1668 aaKnown RBP23.14■■□□□ 1.29
TMEM220-202ENST00000455996 CEP152O94986 1710 aa23.13■■□□□ 1.29
TMEM220-202ENST00000455996 SPHKAPQ2M3C7 1700 aa23.13■■□□□ 1.29
TMEM220-202ENST00000455996 PPP6R1Q9UPN7 881 aa23.12■■□□□ 1.29
TMEM220-202ENST00000455996 ARHGAP31Q2M1Z3 1444 aa23.11■■□□□ 1.29
TMEM220-202ENST00000455996 WASHC2CQ9Y4E1 1318 aa23.1■■□□□ 1.29
TMEM220-202ENST00000455996 NPATQ14207 1427 aa23.1■■□□□ 1.29
TMEM220-202ENST00000455996 UHRF1BP1Q6BDS2 1440 aa23.1■■□□□ 1.29
TMEM220-202ENST00000455996 NEURL4Q96JN8 1562 aa23.08■■□□□ 1.29
TMEM220-202ENST00000455996 CAMSAP1Q5T5Y3 1602 aa23.08■■□□□ 1.29
TMEM220-202ENST00000455996 SPATA31E1Q6ZUB1 1445 aa23.07■■□□□ 1.28
TMEM220-202ENST00000455996 SIGLEC1Q9BZZ2 1709 aa23.06■■□□□ 1.28
TMEM220-202ENST00000455996 CLTCL1P53675 1640 aa23.05■■□□□ 1.28
TMEM220-202ENST00000455996 NBPF8Q3BBV2 869 aa23.05■■□□□ 1.28
TMEM220-202ENST00000455996 CNTLNQ9NXG0 1405 aa23.04■■□□□ 1.28
TMEM220-202ENST00000455996 NOS1P29475 1434 aa23.03■■□□□ 1.28
TMEM220-202ENST00000455996 DCAF11Q8TEB1 546 aa22.97■■□□□ 1.27
TMEM220-202ENST00000455996 STAC3Q96MF2 364 aa22.97■■□□□ 1.27
TMEM220-202ENST00000455996 RALGAPBQ86X10 1494 aa22.96■■□□□ 1.27
TMEM220-202ENST00000455996 PRAG1Q86YV5 1406 aa22.95■■□□□ 1.26
TMEM220-202ENST00000455996 SENP3Q9H4L4 574 aaPredicted RBP22.95■■□□□ 1.26
TMEM220-202ENST00000455996 UGGT1Q9NYU2 1555 aa22.95■■□□□ 1.26
TMEM220-202ENST00000455996 PIK3C2BO00750 1634 aa22.94■■□□□ 1.26
TMEM220-202ENST00000455996 RGL3Q3MIN7 710 aa22.93■■□□□ 1.26
TMEM220-202ENST00000455996 SYNMO15061 1565 aa22.93■■□□□ 1.26
TMEM220-202ENST00000455996 ADGRB3O60242 1522 aa22.92■■□□□ 1.26
TMEM220-202ENST00000455996 KIF1BO60333 1816 aa22.89■■□□□ 1.25
TMEM220-202ENST00000455996 CLTCQ00610 1675 aaKnown RBP22.89■■□□□ 1.25
TMEM220-202ENST00000455996 PREX1Q8TCU6 1659 aa22.89■■□□□ 1.25
TMEM220-202ENST00000455996 KDM2AQ9Y2K7 1162 aa22.89■■□□□ 1.25
TMEM220-202ENST00000455996 ERVK-7P63135 1459 aa22.89■■□□□ 1.25
TMEM220-202ENST00000455996 EIF4G2P78344 907 aaKnown RBP eCLIP22.88■■□□□ 1.25
TMEM220-202ENST00000455996 DIEXFQ68CQ4 756 aaKnown RBP22.87■■□□□ 1.25
TMEM220-202ENST00000455996 SLC52A1Q9NWF4 448 aa22.87■■□□□ 1.25
TMEM220-202ENST00000455996 GPRASP1Q5JY77 1395 aa22.86■■□□□ 1.25
TMEM220-202ENST00000455996 MYOM2P54296 1465 aa22.85■■□□□ 1.25
TMEM220-202ENST00000455996 SPATA31D1Q6ZQQ2 1576 aa22.85■■□□□ 1.25
TMEM220-202ENST00000455996 HSPA5P11021 654 aaKnown RBP22.85■■□□□ 1.25
TMEM220-202ENST00000455996 MLECQ14165 292 aa22.85■■□□□ 1.25
TMEM220-202ENST00000455996 TRPM1Q7Z4N2 1603 aa22.85■■□□□ 1.25
TMEM220-202ENST00000455996 ZNF326Q5BKZ1 582 aaKnown RBP22.84■■□□□ 1.25
TMEM220-202ENST00000455996 MROH2AA6NES4 1674 aa22.84■■□□□ 1.25
TMEM220-202ENST00000455996 ARID4BQ4LE39 1312 aaPredicted RBP22.83■■□□□ 1.25
TMEM220-202ENST00000455996 MADDQ8WXG6 1647 aa22.83■■□□□ 1.25
TMEM220-202ENST00000455996 RPGRIP1LQ68CZ1 1315 aa22.82■■□□□ 1.24
TMEM220-202ENST00000455996 CFAP65Q6ZU64 1925 aaKnown RBP22.82■■□□□ 1.24
TMEM220-202ENST00000455996 IFT172Q9UG01 1749 aa22.82■■□□□ 1.24
TMEM220-202ENST00000455996 LAMC1P11047 1609 aa22.81■■□□□ 1.24
TMEM220-202ENST00000455996 NRXN1Q9ULB1 1477 aa22.81■■□□□ 1.24
TMEM220-202ENST00000455996 ZMYM3Q14202 1370 aa22.81■■□□□ 1.24
TMEM220-202ENST00000455996 IDI1Q13907 227 aa22.8■■□□□ 1.24
TMEM220-202ENST00000455996 FBXO31Q5XUX0 539 aaPredicted RBP22.8■■□□□ 1.24
TMEM220-202ENST00000455996 ESF1Q9H501 851 aaKnown RBP22.79■■□□□ 1.24
TMEM220-202ENST00000455996 USP47Q96K76 1375 aa22.78■■□□□ 1.24
TMEM220-202ENST00000455996 ROCK2O75116 1388 aaKnown RBP22.77■■□□□ 1.24
TMEM220-202ENST00000455996 HIRIP3Q9BW71 556 aaPredicted RBP22.76■■□□□ 1.23
TMEM220-202ENST00000455996 CARD11Q9BXL7 1154 aa22.76■■□□□ 1.23
TMEM220-202ENST00000455996 KIAA1210Q9ULL0 1709 aa22.75■■□□□ 1.23
TMEM220-202ENST00000455996 TMEM131LA2VDJ0 1609 aa22.75■■□□□ 1.23
TMEM220-202ENST00000455996 PPLO60437 1756 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms