RNA–Protein interactions for RNA: ENST00000455540.2

CYCSP53-201, Transcript of cytochrome c, somatic pseudogene 53, humanhuman

BASIC

Gene CYCSP53, Length 265 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP53-201ENST00000455540 GPIHBP1Q8IV16 184 aa13.3□□□□□ -0.28
CYCSP53-201ENST00000455540 ARHGAP33O14559 1287 aa13.27□□□□□ -0.29
CYCSP53-201ENST00000455540 FCHSD2O94868 740 aa13.27□□□□□ -0.29
CYCSP53-201ENST00000455540 PRIM1P49642 420 aaKnown RBP13.26□□□□□ -0.29
CYCSP53-201ENST00000455540 HIC1Q14526 733 aa13.24□□□□□ -0.29
CYCSP53-201ENST00000455540 PPP1R3GB7ZBB8 358 aa13.23□□□□□ -0.29
CYCSP53-201ENST00000455540 PTGDRQ13258 359 aa13.23□□□□□ -0.29
CYCSP53-201ENST00000455540 TSR1Q2NL82 804 aaKnown RBP13.23□□□□□ -0.29
CYCSP53-201ENST00000455540 KCNK17Q96T54 332 aa13.21□□□□□ -0.29
CYCSP53-201ENST00000455540 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
CYCSP53-201ENST00000455540 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
CYCSP53-201ENST00000455540 POTEGQ6S5H5 508 aa13.2□□□□□ -0.3
CYCSP53-201ENST00000455540 ZC3H15Q8WU90 426 aaKnown RBP13.2□□□□□ -0.3
CYCSP53-201ENST00000455540 RBM27Q9P2N5 1060 aaKnown RBP13.2□□□□□ -0.3
CYCSP53-201ENST00000455540 POTEMA6NI47 508 aa13.19□□□□□ -0.3
CYCSP53-201ENST00000455540 SLC4A5Q9BY07 1137 aa13.19□□□□□ -0.3
CYCSP53-201ENST00000455540 NPDC1Q9NQX5 325 aaPredicted RBP13.19□□□□□ -0.3
CYCSP53-201ENST00000455540 GNPATO15228 680 aa13.18□□□□□ -0.3
CYCSP53-201ENST00000455540 ONECUT3O60422 494 aaPredicted RBP13.18□□□□□ -0.3
CYCSP53-201ENST00000455540 CDHR5Q9HBB8 845 aa13.17□□□□□ -0.3
CYCSP53-201ENST00000455540 ZMYND10O75800 440 aa13.16□□□□□ -0.3
CYCSP53-201ENST00000455540 PRSS12P56730 875 aa13.15□□□□□ -0.3
CYCSP53-201ENST00000455540 GPR37O15354 613 aa13.14□□□□□ -0.31
CYCSP53-201ENST00000455540 COL9A1P20849 921 aa13.14□□□□□ -0.31
CYCSP53-201ENST00000455540 PSEN2P49810 448 aa13.14□□□□□ -0.31
CYCSP53-201ENST00000455540 BARGINQ6ZT62 677 aa13.14□□□□□ -0.31
CYCSP53-201ENST00000455540 PCDH10Q9P2E7 1040 aa13.14□□□□□ -0.31
CYCSP53-201ENST00000455540 TK2O00142 265 aa13.13□□□□□ -0.31
CYCSP53-201ENST00000455540 POTEEQ6S8J3 1075 aa13.13□□□□□ -0.31
CYCSP53-201ENST00000455540 CDCA7LQ96GN5 454 aa13.13□□□□□ -0.31
CYCSP53-201ENST00000455540 AXIN2Q9Y2T1 843 aa13.13□□□□□ -0.31
CYCSP53-201ENST00000455540 TPRNQ4KMQ1 711 aa13.12□□□□□ -0.31
CYCSP53-201ENST00000455540 ZBED2Q9BTP6 218 aa13.12□□□□□ -0.31
CYCSP53-201ENST00000455540 PACS2Q86VP3 889 aa13.11□□□□□ -0.31
CYCSP53-201ENST00000455540 MINK1Q8N4C8 1332 aaPredicted RBP13.11□□□□□ -0.31
CYCSP53-201ENST00000455540 KRI1Q8N9T8 703 aaKnown RBP13.1□□□□□ -0.31
CYCSP53-201ENST00000455540 TRIM6-TRIM34B2RNG4 842 aa13.09□□□□□ -0.31
CYCSP53-201ENST00000455540 LSM11P83369 360 aaKnown RBP eCLIP13.09□□□□□ -0.31
CYCSP53-201ENST00000455540 CDAN1Q8IWY9 1227 aa13.09□□□□□ -0.31
CYCSP53-201ENST00000455540 TTC13Q8NBP0 860 aa13.09□□□□□ -0.31
CYCSP53-201ENST00000455540 MAP2K5Q13163 448 aa13.08□□□□□ -0.32
CYCSP53-201ENST00000455540 DMRTA1Q5VZB9 504 aa13.07□□□□□ -0.32
CYCSP53-201ENST00000455540 RABGEF1Q9UJ41 708 aa13.07□□□□□ -0.32
CYCSP53-201ENST00000455540 PADI6Q6TGC4 694 aa13.06□□□□□ -0.32
CYCSP53-201ENST00000455540 VPS9D1Q9Y2B5 631 aa13.06□□□□□ -0.32
CYCSP53-201ENST00000455540 OATP04181 439 aa13.05□□□□□ -0.32
CYCSP53-201ENST00000455540 IRF6O14896 467 aa13.04□□□□□ -0.32
CYCSP53-201ENST00000455540 NBPF26B4DH59 902 aa13.03□□□□□ -0.32
CYCSP53-201ENST00000455540 ANKRD13DQ6ZTN6 518 aa13.03□□□□□ -0.32
CYCSP53-201ENST00000455540 NBPF3Q9H094 633 aa13.03□□□□□ -0.32
CYCSP53-201ENST00000455540 TSKSQ9UJT2 592 aa13.03□□□□□ -0.32
CYCSP53-201ENST00000455540 PROX2Q3B8N5 592 aa13.02□□□□□ -0.33
CYCSP53-201ENST00000455540 ADGRD1Q6QNK2 874 aa13.02□□□□□ -0.33
CYCSP53-201ENST00000455540 FECHP22830 423 aa13.01□□□□□ -0.33
CYCSP53-201ENST00000455540 RBM46Q8TBY0 533 aaKnown RBP13.01□□□□□ -0.33
CYCSP53-201ENST00000455540 AK7Q96M32 723 aa13.01□□□□□ -0.33
CYCSP53-201ENST00000455540 STAC3Q96MF2 364 aa13.01□□□□□ -0.33
CYCSP53-201ENST00000455540 KIAA1468Q9P260 1216 aa13.01□□□□□ -0.33
CYCSP53-201ENST00000455540 KRTAP3-3Q9BYR6 98 aa13□□□□□ -0.33
CYCSP53-201ENST00000455540 KRTAP3-2Q9BYR7 98 aa13□□□□□ -0.33
CYCSP53-201ENST00000455540 LAPTM4BQ86VI4 370 aa12.99□□□□□ -0.33
CYCSP53-201ENST00000455540 ADGRG1Q9Y653 693 aa12.99□□□□□ -0.33
CYCSP53-201ENST00000455540 TATDN2Q93075 761 aa12.98□□□□□ -0.33
CYCSP53-201ENST00000455540 BHMG1C9JSJ3 638 aaPredicted RBP12.96□□□□□ -0.33
CYCSP53-201ENST00000455540 FAM198AQ9UFP1 575 aa12.96□□□□□ -0.33
CYCSP53-201ENST00000455540 PNMA3Q9UL41 463 aa12.96□□□□□ -0.33
CYCSP53-201ENST00000455540 NUDT18Q6ZVK8 323 aa12.95□□□□□ -0.34
CYCSP53-201ENST00000455540 SLC24A3Q9HC58 644 aa12.95□□□□□ -0.34
CYCSP53-201ENST00000455540 HRO43593 1189 aa12.94□□□□□ -0.34
CYCSP53-201ENST00000455540 MRPL50Q8N5N7 158 aaKnown RBP12.94□□□□□ -0.34
CYCSP53-201ENST00000455540 CCDC102AQ96A19 550 aa12.94□□□□□ -0.34
CYCSP53-201ENST00000455540 EYA1Q99502 592 aa12.94□□□□□ -0.34
CYCSP53-201ENST00000455540 PRKCSHP14314 528 aaPredicted RBP12.93□□□□□ -0.34
CYCSP53-201ENST00000455540 FAM98CQ17RN3 349 aaKnown RBP12.93□□□□□ -0.34
CYCSP53-201ENST00000455540 PXYLP1Q8TE99 480 aa12.93□□□□□ -0.34
CYCSP53-201ENST00000455540 HDGFP51858 240 aaKnown RBP12.92□□□□□ -0.34
CYCSP53-201ENST00000455540 METTL3Q86U44 580 aaKnown RBP12.92□□□□□ -0.34
CYCSP53-201ENST00000455540 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.91□□□□□ -0.34
CYCSP53-201ENST00000455540 DNAJB2P25686 324 aa12.89□□□□□ -0.35
CYCSP53-201ENST00000455540 GOLGA8CPA6NN73 597 aa12.88□□□□□ -0.35
CYCSP53-201ENST00000455540 TRIM66O15016 1216 aa12.88□□□□□ -0.35
CYCSP53-201ENST00000455540 SLC4A3P48751 1232 aa12.87□□□□□ -0.35
CYCSP53-201ENST00000455540 FAM161AQ3B820 660 aa12.87□□□□□ -0.35
CYCSP53-201ENST00000455540 RCCD1A6NED2 376 aa12.86□□□□□ -0.35
CYCSP53-201ENST00000455540 AMHR2Q16671 573 aa12.86□□□□□ -0.35
CYCSP53-201ENST00000455540 SEPT9Q9UHD8 586 aaPredicted RBP12.86□□□□□ -0.35
CYCSP53-201ENST00000455540 SMAPO00193 183 aa12.85□□□□□ -0.35
CYCSP53-201ENST00000455540 CLCN1P35523 988 aa12.84□□□□□ -0.35
CYCSP53-201ENST00000455540 ZFRQ96KR1 1074 aaKnown RBP12.84□□□□□ -0.35
CYCSP53-201ENST00000455540 C3orf80F5H4A9 247 aa12.82□□□□□ -0.36
CYCSP53-201ENST00000455540 TMEM134Q9H6X4 195 aa12.82□□□□□ -0.36
CYCSP53-201ENST00000455540 RSPH4AQ5TD94 716 aa12.81□□□□□ -0.36
CYCSP53-201ENST00000455540 ANKK1Q8NFD2 765 aa12.81□□□□□ -0.36
CYCSP53-201ENST00000455540 NECTIN2Q92692 538 aa12.81□□□□□ -0.36
CYCSP53-201ENST00000455540 DAXXQ9UER7 740 aaPredicted RBP12.81□□□□□ -0.36
CYCSP53-201ENST00000455540 PDE4DQ08499 809 aa12.8□□□□□ -0.36
CYCSP53-201ENST00000455540 PHOX2BQ99453 314 aa12.8□□□□□ -0.36
CYCSP53-201ENST00000455540 GPCPD1Q9NPB8 672 aa12.8□□□□□ -0.36
CYCSP53-201ENST00000455540 SULF1Q8IWU6 871 aa12.79□□□□□ -0.36
CYCSP53-201ENST00000455540 TTLL12Q14166 644 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms