RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 ATP7AQ04656 1500 aa15.03■□□□□ -0
GTF3C2-206ENST00000454704 SPAG9O60271 1321 aaKnown RBP15.02■□□□□ -0
GTF3C2-206ENST00000454704 INO80Q9ULG1 1556 aaPredicted RBP15.02■□□□□ -0
GTF3C2-206ENST00000454704 NCOA1Q15788 1441 aa15.02□□□□□ -0.01
GTF3C2-206ENST00000454704 PLXNC1O60486 1568 aa15.02□□□□□ -0.01
GTF3C2-206ENST00000454704 PPP1R15AO75807 674 aaPredicted RBP15.01□□□□□ -0.01
GTF3C2-206ENST00000454704 HNRNPMP52272 730 aaKnown RBP eCLIP15.01□□□□□ -0.01
GTF3C2-206ENST00000454704 TONSLQ96HA7 1378 aa15□□□□□ -0.01
GTF3C2-206ENST00000454704 CLTCQ00610 1675 aaKnown RBP15□□□□□ -0.01
GTF3C2-206ENST00000454704 MYT1Q01538 1121 aa15□□□□□ -0.01
GTF3C2-206ENST00000454704 NPATQ14207 1427 aa14.99□□□□□ -0.01
GTF3C2-206ENST00000454704 KIAA1107Q9UPP5 1409 aa14.99□□□□□ -0.01
GTF3C2-206ENST00000454704 PLEKHH2Q8IVE3 1493 aa14.99□□□□□ -0.01
GTF3C2-206ENST00000454704 CAMSAP1Q5T5Y3 1602 aa14.99□□□□□ -0.01
GTF3C2-206ENST00000454704 LTBP4Q8N2S1 1624 aa14.99□□□□□ -0.01
GTF3C2-206ENST00000454704 CFDP1Q9UEE9 299 aaPredicted RBP14.99□□□□□ -0.01
GTF3C2-206ENST00000454704 PTPRKQ15262 1439 aa14.98□□□□□ -0.01
GTF3C2-206ENST00000454704 ZMYM3Q14202 1370 aa14.98□□□□□ -0.01
GTF3C2-206ENST00000454704 A2MP01023 1474 aa14.97□□□□□ -0.01
GTF3C2-206ENST00000454704 CCER2I3L3R5 266 aa14.97□□□□□ -0.01
GTF3C2-206ENST00000454704 MYO3AQ8NEV4 1616 aa14.97□□□□□ -0.01
GTF3C2-206ENST00000454704 DNMT1P26358 1616 aaKnown RBP14.96□□□□□ -0.01
GTF3C2-206ENST00000454704 ZNF142P52746 1687 aaPredicted RBP14.96□□□□□ -0.02
GTF3C2-206ENST00000454704 ROCK1Q13464 1354 aa14.95□□□□□ -0.02
GTF3C2-206ENST00000454704 ADGBQ8N7X0 1667 aa14.95□□□□□ -0.02
GTF3C2-206ENST00000454704 DISP3Q9P2K9 1392 aa14.94□□□□□ -0.02
GTF3C2-206ENST00000454704 SIN3AQ96ST3 1273 aa14.93□□□□□ -0.02
GTF3C2-206ENST00000454704 CEP170BQ9Y4F5 1589 aaPredicted RBP14.93□□□□□ -0.02
GTF3C2-206ENST00000454704 ZNF644Q9H582 1327 aaPredicted RBP14.92□□□□□ -0.02
GTF3C2-206ENST00000454704 NCKAP5LQ9HCH0 1330 aa14.92□□□□□ -0.02
GTF3C2-206ENST00000454704 IQSEC2Q5JU85 1478 aa14.92□□□□□ -0.02
GTF3C2-206ENST00000454704 GGT6Q6P531 493 aa14.92□□□□□ -0.02
GTF3C2-206ENST00000454704 POLR1AO95602 1720 aaPredicted RBP14.91□□□□□ -0.02
GTF3C2-206ENST00000454704 SPATA31D1Q6ZQQ2 1576 aa14.91□□□□□ -0.02
GTF3C2-206ENST00000454704 MBD5Q9P267 1494 aa14.9□□□□□ -0.02
GTF3C2-206ENST00000454704 PLA2R1Q13018 1463 aa14.9□□□□□ -0.02
GTF3C2-206ENST00000454704 ILDR2Q71H61 639 aa14.89□□□□□ -0.03
GTF3C2-206ENST00000454704 ZNF335Q9H4Z2 1342 aaPredicted RBP14.89□□□□□ -0.03
GTF3C2-206ENST00000454704 CROCC2H7BZ55 1655 aa14.86□□□□□ -0.03
GTF3C2-206ENST00000454704 RTEL1-TNFRSF6BF6WH68 1400 aa14.86□□□□□ -0.03
GTF3C2-206ENST00000454704 ANP32CO43423 234 aa14.85□□□□□ -0.03
GTF3C2-206ENST00000454704 PKD2Q13563 968 aa14.85□□□□□ -0.03
GTF3C2-206ENST00000454704 DAPK1P53355 1430 aa14.85□□□□□ -0.03
GTF3C2-206ENST00000454704 PPP6R1Q9UPN7 881 aa14.84□□□□□ -0.03
GTF3C2-206ENST00000454704 A2ML1A8K2U0 1454 aa14.84□□□□□ -0.03
GTF3C2-206ENST00000454704 CAMSAP2Q08AD1 1489 aa14.84□□□□□ -0.03
GTF3C2-206ENST00000454704 CCDC141Q6ZP82 1450 aa14.84□□□□□ -0.03
GTF3C2-206ENST00000454704 SUPT16HQ9Y5B9 1047 aaKnown RBP14.83□□□□□ -0.03
GTF3C2-206ENST00000454704 DHX29Q7Z478 1369 aaKnown RBP14.83□□□□□ -0.03
GTF3C2-206ENST00000454704 DDX10Q13206 875 aaKnown RBP14.83□□□□□ -0.04
GTF3C2-206ENST00000454704 KDM5DQ9BY66 1539 aa14.82□□□□□ -0.04
GTF3C2-206ENST00000454704 ADGRL2O95490 1459 aa14.81□□□□□ -0.04
GTF3C2-206ENST00000454704 UBAP1LF5GYI3 381 aa14.81□□□□□ -0.04
GTF3C2-206ENST00000454704 PZPP20742 1482 aa14.8□□□□□ -0.04
GTF3C2-206ENST00000454704 TNRQ92752 1358 aa14.8□□□□□ -0.04
GTF3C2-206ENST00000454704 SOCS7O14512 581 aa14.8□□□□□ -0.04
GTF3C2-206ENST00000454704 KIF3BO15066 747 aa14.8□□□□□ -0.04
GTF3C2-206ENST00000454704 NEURL4Q96JN8 1562 aa14.8□□□□□ -0.04
GTF3C2-206ENST00000454704 RPRD2Q5VT52 1461 aaKnown RBP14.8□□□□□ -0.04
GTF3C2-206ENST00000454704 FBXO31Q5XUX0 539 aaPredicted RBP14.79□□□□□ -0.04
GTF3C2-206ENST00000454704 FAM135AQ9P2D6 1515 aa14.79□□□□□ -0.04
GTF3C2-206ENST00000454704 ABCC5O15440 1437 aa14.78□□□□□ -0.04
GTF3C2-206ENST00000454704 ARHGEF5Q12774 1597 aa14.78□□□□□ -0.04
GTF3C2-206ENST00000454704 WASHC2CQ9Y4E1 1318 aa14.76□□□□□ -0.05
GTF3C2-206ENST00000454704 SHANK2Q9UPX8 1470 aa14.75□□□□□ -0.05
GTF3C2-206ENST00000454704 MPHOSPH9Q99550 1183 aa14.75□□□□□ -0.05
GTF3C2-206ENST00000454704 RSPH4AQ5TD94 716 aa14.74□□□□□ -0.05
GTF3C2-206ENST00000454704 RNF17Q9BXT8 1623 aaKnown RBP14.74□□□□□ -0.05
GTF3C2-206ENST00000454704 CPS1P31327 1500 aa14.73□□□□□ -0.05
GTF3C2-206ENST00000454704 RRP7BPQ9NSQ0 103 aa14.73□□□□□ -0.05
GTF3C2-206ENST00000454704 ANKRD30BQ9BXX2 1392 aa14.73□□□□□ -0.05
GTF3C2-206ENST00000454704 NLRP1Q9C000 1473 aa14.73□□□□□ -0.05
GTF3C2-206ENST00000454704 EIF4G2P78344 907 aaKnown RBP eCLIP14.72□□□□□ -0.05
GTF3C2-206ENST00000454704 TRIM52Q96A61 297 aa14.72□□□□□ -0.05
GTF3C2-206ENST00000454704 UGGT1Q9NYU2 1555 aa14.72□□□□□ -0.05
GTF3C2-206ENST00000454704 ABCC3O15438 1527 aa14.71□□□□□ -0.05
GTF3C2-206ENST00000454704 VWDEQ8N2E2 1590 aa14.71□□□□□ -0.05
GTF3C2-206ENST00000454704 ZC3H13Q5T200 1668 aaKnown RBP14.7□□□□□ -0.06
GTF3C2-206ENST00000454704 MAST1Q9Y2H9 1570 aa14.7□□□□□ -0.06
GTF3C2-206ENST00000454704 NEFLP07196 543 aa14.7□□□□□ -0.06
GTF3C2-206ENST00000454704 TSPY4P0CV99 314 aa14.7□□□□□ -0.06
GTF3C2-206ENST00000454704 TSPY10P0CW01 314 aa14.7□□□□□ -0.06
GTF3C2-206ENST00000454704 DEPDC5O75140 1603 aa14.69□□□□□ -0.06
GTF3C2-206ENST00000454704 PIP4K2BP78356 416 aa14.69□□□□□ -0.06
GTF3C2-206ENST00000454704 ANKLE2Q86XL3 938 aa14.69□□□□□ -0.06
GTF3C2-206ENST00000454704 EIF2AK4Q9P2K8 1649 aaKnown RBP14.69□□□□□ -0.06
GTF3C2-206ENST00000454704 IQGAP1P46940 1657 aa14.68□□□□□ -0.06
GTF3C2-206ENST00000454704 THEMISQ8N1K5 641 aaPredicted RBP14.68□□□□□ -0.06
GTF3C2-206ENST00000454704 NPHP4O75161 1426 aaPredicted RBP14.68□□□□□ -0.06
GTF3C2-206ENST00000454704 HSPA1LP34931 641 aa14.67□□□□□ -0.06
GTF3C2-206ENST00000454704 CHIC2Q9UKJ5 165 aa14.67□□□□□ -0.06
GTF3C2-206ENST00000454704 MROH1Q8NDA8 1641 aa14.67□□□□□ -0.06
GTF3C2-206ENST00000454704 MED14O60244 1454 aa14.67□□□□□ -0.06
GTF3C2-206ENST00000454704 ERVK-7P63135 1459 aa14.66□□□□□ -0.06
GTF3C2-206ENST00000454704 CEP152O94986 1710 aa14.66□□□□□ -0.06
GTF3C2-206ENST00000454704 ANKRD30AQ9BXX3 1397 aa14.66□□□□□ -0.06
GTF3C2-206ENST00000454704 TOM1O60784 492 aa14.66□□□□□ -0.06
GTF3C2-206ENST00000454704 HSPA5P11021 654 aaKnown RBP14.66□□□□□ -0.06
GTF3C2-206ENST00000454704 MED1Q15648 1581 aaPredicted RBP14.65□□□□□ -0.06
GTF3C2-206ENST00000454704 ALKQ9UM73 1620 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms