RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 A2ML1A8K2U0 1454 aa9.72□□□□□ -0.85
HLA-DPA3-207ENST00000454398 IQSEC2Q5JU85 1478 aa9.72□□□□□ -0.85
HLA-DPA3-207ENST00000454398 UBAP1LF5GYI3 381 aa9.7□□□□□ -0.86
HLA-DPA3-207ENST00000454398 TNRQ92752 1358 aa9.7□□□□□ -0.86
HLA-DPA3-207ENST00000454398 PZPP20742 1482 aa9.7□□□□□ -0.86
HLA-DPA3-207ENST00000454398 CEP152O94986 1710 aa9.69□□□□□ -0.86
HLA-DPA3-207ENST00000454398 DHX29Q7Z478 1369 aaKnown RBP9.69□□□□□ -0.86
HLA-DPA3-207ENST00000454398 VWDEQ8N2E2 1590 aa9.69□□□□□ -0.86
HLA-DPA3-207ENST00000454398 SCAF1Q9H7N4 1312 aaKnown RBP9.69□□□□□ -0.86
HLA-DPA3-207ENST00000454398 PPP6R1Q9UPN7 881 aa9.69□□□□□ -0.86
HLA-DPA3-207ENST00000454398 MROH1Q8NDA8 1641 aa9.68□□□□□ -0.86
HLA-DPA3-207ENST00000454398 RNF17Q9BXT8 1623 aaKnown RBP9.68□□□□□ -0.86
HLA-DPA3-207ENST00000454398 MED1Q15648 1581 aaPredicted RBP9.68□□□□□ -0.86
HLA-DPA3-207ENST00000454398 SENP3Q9H4L4 574 aaPredicted RBP9.68□□□□□ -0.86
HLA-DPA3-207ENST00000454398 STRCP1A6NGW2 1772 aa9.68□□□□□ -0.86
HLA-DPA3-207ENST00000454398 ARHGEF5Q12774 1597 aa9.67□□□□□ -0.86
HLA-DPA3-207ENST00000454398 ABCC3O15438 1527 aa9.67□□□□□ -0.86
HLA-DPA3-207ENST00000454398 RTEL1-TNFRSF6BF6WH68 1400 aa9.67□□□□□ -0.86
HLA-DPA3-207ENST00000454398 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.67□□□□□ -0.86
HLA-DPA3-207ENST00000454398 KIF3BO15066 747 aa9.67□□□□□ -0.86
HLA-DPA3-207ENST00000454398 PIP4K2BP78356 416 aa9.66□□□□□ -0.86
HLA-DPA3-207ENST00000454398 IQGAP1P46940 1657 aa9.66□□□□□ -0.86
HLA-DPA3-207ENST00000454398 HSPA1LP34931 641 aa9.65□□□□□ -0.86
HLA-DPA3-207ENST00000454398 PKD2Q13563 968 aa9.65□□□□□ -0.86
HLA-DPA3-207ENST00000454398 UGGT1Q9NYU2 1555 aa9.65□□□□□ -0.86
HLA-DPA3-207ENST00000454398 ZC3H13Q5T200 1668 aaKnown RBP9.64□□□□□ -0.87
HLA-DPA3-207ENST00000454398 KANK4Q5T7N3 995 aaPredicted RBP9.64□□□□□ -0.87
HLA-DPA3-207ENST00000454398 FAM135AQ9P2D6 1515 aa9.64□□□□□ -0.87
HLA-DPA3-207ENST00000454398 LRRC9Q6ZRR7 1453 aa9.64□□□□□ -0.87
HLA-DPA3-207ENST00000454398 SHANK2Q9UPX8 1470 aa9.64□□□□□ -0.87
HLA-DPA3-207ENST00000454398 CFAP65Q6ZU64 1925 aaKnown RBP9.64□□□□□ -0.87
HLA-DPA3-207ENST00000454398 CROCC2H7BZ55 1655 aa9.64□□□□□ -0.87
HLA-DPA3-207ENST00000454398 CPS1P31327 1500 aa9.63□□□□□ -0.87
HLA-DPA3-207ENST00000454398 ERVK-7P63135 1459 aa9.63□□□□□ -0.87
HLA-DPA3-207ENST00000454398 NPHP4O75161 1426 aaPredicted RBP9.63□□□□□ -0.87
HLA-DPA3-207ENST00000454398 VPS8Q8N3P4 1428 aa9.63□□□□□ -0.87
HLA-DPA3-207ENST00000454398 MAST1Q9Y2H9 1570 aa9.63□□□□□ -0.87
HLA-DPA3-207ENST00000454398 WASHC2CQ9Y4E1 1318 aa9.62□□□□□ -0.87
HLA-DPA3-207ENST00000454398 NLRP1Q9C000 1473 aa9.62□□□□□ -0.87
HLA-DPA3-207ENST00000454398 DEPDC5O75140 1603 aa9.62□□□□□ -0.87
HLA-DPA3-207ENST00000454398 EIF2AK4Q9P2K8 1649 aaKnown RBP9.62□□□□□ -0.87
HLA-DPA3-207ENST00000454398 MIA2Q96PC5 1412 aa9.62□□□□□ -0.87
HLA-DPA3-207ENST00000454398 UBR1Q8IWV7 1749 aa9.62□□□□□ -0.87
HLA-DPA3-207ENST00000454398 MED14O60244 1454 aa9.61□□□□□ -0.87
HLA-DPA3-207ENST00000454398 LOC105371045A0A1W2PR82 267 aa9.61□□□□□ -0.87
HLA-DPA3-207ENST00000454398 SYNMO15061 1565 aa9.6□□□□□ -0.87
HLA-DPA3-207ENST00000454398 PRDM15P57071 1507 aaPredicted RBP9.6□□□□□ -0.87
HLA-DPA3-207ENST00000454398 MYOM3Q5VTT5 1437 aa9.59□□□□□ -0.87
HLA-DPA3-207ENST00000454398 LRRC7Q96NW7 1537 aa9.59□□□□□ -0.87
HLA-DPA3-207ENST00000454398 PIK3C2BO00750 1634 aa9.58□□□□□ -0.88
HLA-DPA3-207ENST00000454398 XIRP1Q702N8 1843 aaKnown RBP9.58□□□□□ -0.88
HLA-DPA3-207ENST00000454398 LTKP29376 864 aa9.57□□□□□ -0.88
HLA-DPA3-207ENST00000454398 KIF15Q9NS87 1388 aa9.57□□□□□ -0.88
HLA-DPA3-207ENST00000454398 SCAF11Q99590 1463 aaKnown RBP9.57□□□□□ -0.88
HLA-DPA3-207ENST00000454398 DUOX2Q9NRD8 1548 aa9.56□□□□□ -0.88
HLA-DPA3-207ENST00000454398 PTPN23Q9H3S7 1636 aa9.56□□□□□ -0.88
HLA-DPA3-207ENST00000454398 ANKLE2Q86XL3 938 aa9.56□□□□□ -0.88
HLA-DPA3-207ENST00000454398 ARHGAP23Q9P227 1491 aa9.55□□□□□ -0.88
HLA-DPA3-207ENST00000454398 ABCC5O15440 1437 aa9.55□□□□□ -0.88
HLA-DPA3-207ENST00000454398 TSPY4P0CV99 314 aa9.54□□□□□ -0.88
HLA-DPA3-207ENST00000454398 TSPY10P0CW01 314 aa9.54□□□□□ -0.88
HLA-DPA3-207ENST00000454398 RGS17Q9UGC6 210 aaPredicted RBP9.54□□□□□ -0.88
HLA-DPA3-207ENST00000454398 TOM1O60784 492 aa9.53□□□□□ -0.88
HLA-DPA3-207ENST00000454398 THEMISQ8N1K5 641 aaPredicted RBP9.53□□□□□ -0.88
HLA-DPA3-207ENST00000454398 SLIT1O75093 1534 aa9.52□□□□□ -0.88
HLA-DPA3-207ENST00000454398 DAPK1P53355 1430 aa9.52□□□□□ -0.89
HLA-DPA3-207ENST00000454398 ERBINQ96RT1 1412 aa9.52□□□□□ -0.89
HLA-DPA3-207ENST00000454398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.52□□□□□ -0.89
HLA-DPA3-207ENST00000454398 PHF23Q9BUL5 403 aaPredicted RBP9.52□□□□□ -0.89
HLA-DPA3-207ENST00000454398 MAP3K1Q13233 1512 aa9.51□□□□□ -0.89
HLA-DPA3-207ENST00000454398 EFCAB6Q5THR3 1501 aa9.51□□□□□ -0.89
HLA-DPA3-207ENST00000454398 FGD6Q6ZV73 1430 aa9.51□□□□□ -0.89
HLA-DPA3-207ENST00000454398 RRP7BPQ9NSQ0 103 aa9.51□□□□□ -0.89
HLA-DPA3-207ENST00000454398 ADGRB3O60242 1522 aa9.51□□□□□ -0.89
HLA-DPA3-207ENST00000454398 MYO5BQ9ULV0 1848 aa9.5□□□□□ -0.89
HLA-DPA3-207ENST00000454398 RSPH4AQ5TD94 716 aa9.5□□□□□ -0.89
HLA-DPA3-207ENST00000454398 RBM33Q96EV2 1170 aaKnown RBP9.5□□□□□ -0.89
HLA-DPA3-207ENST00000454398 SETD1AO15047 1707 aaKnown RBP9.5□□□□□ -0.89
HLA-DPA3-207ENST00000454398 ARHGAP31Q2M1Z3 1444 aa9.49□□□□□ -0.89
HLA-DPA3-207ENST00000454398 ROBO1Q9Y6N7 1651 aa9.48□□□□□ -0.89
HLA-DPA3-207ENST00000454398 CHIC2Q9UKJ5 165 aa9.48□□□□□ -0.89
HLA-DPA3-207ENST00000454398 TET3O43151 1660 aa9.48□□□□□ -0.89
HLA-DPA3-207ENST00000454398 GCC2Q8IWJ2 1684 aa9.48□□□□□ -0.89
HLA-DPA3-207ENST00000454398 TMEM2Q9UHN6 1383 aa9.48□□□□□ -0.89
HLA-DPA3-207ENST00000454398 TXNDC2Q86VQ3 553 aa9.47□□□□□ -0.89
HLA-DPA3-207ENST00000454398 TMEM94Q12767 1356 aa9.47□□□□□ -0.89
HLA-DPA3-207ENST00000454398 NOS1P29475 1434 aa9.47□□□□□ -0.89
HLA-DPA3-207ENST00000454398 LMTK2Q8IWU2 1503 aa9.46□□□□□ -0.89
HLA-DPA3-207ENST00000454398 NWD1Q149M9 1564 aa9.46□□□□□ -0.89
HLA-DPA3-207ENST00000454398 IDI1Q13907 227 aa9.46□□□□□ -0.9
HLA-DPA3-207ENST00000454398 SLC26A8Q96RN1 970 aa9.45□□□□□ -0.9
HLA-DPA3-207ENST00000454398 KDM5AP29375 1690 aaKnown RBP9.45□□□□□ -0.9
HLA-DPA3-207ENST00000454398 POTEAQ6S8J7 498 aa9.44□□□□□ -0.9
HLA-DPA3-207ENST00000454398 STAG3Q9UJ98 1225 aa9.44□□□□□ -0.9
HLA-DPA3-207ENST00000454398 KANK1Q14678 1352 aa9.44□□□□□ -0.9
HLA-DPA3-207ENST00000454398 ZFYVE9O95405 1425 aa9.43□□□□□ -0.9
HLA-DPA3-207ENST00000454398 ANKRD30AQ9BXX3 1397 aa9.43□□□□□ -0.9
HLA-DPA3-207ENST00000454398 PHLPP1O60346 1717 aa9.42□□□□□ -0.9
HLA-DPA3-207ENST00000454398 ADGRL2O95490 1459 aa9.42□□□□□ -0.9
HLA-DPA3-207ENST00000454398 NKTRP30414 1462 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms