RNA–Protein interactions for RNA: ENST00000454141.5

SEC22C-212, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-212ENST00000454141 MAST1Q9Y2H9 1570 aa28.83■■■□□ 2.21
SEC22C-212ENST00000454141 ZNF142P52746 1687 aaPredicted RBP28.83■■■□□ 2.21
SEC22C-212ENST00000454141 CEP170BQ9Y4F5 1589 aaPredicted RBP28.81■■■□□ 2.2
SEC22C-212ENST00000454141 APLP2Q06481 763 aa28.79■■■□□ 2.2
SEC22C-212ENST00000454141 PZPP20742 1482 aa28.75■■■□□ 2.19
SEC22C-212ENST00000454141 PLA2R1Q13018 1463 aa28.75■■■□□ 2.19
SEC22C-212ENST00000454141 WASHC2CQ9Y4E1 1318 aa28.74■■■□□ 2.19
SEC22C-212ENST00000454141 RNF17Q9BXT8 1623 aaKnown RBP28.72■■■□□ 2.19
SEC22C-212ENST00000454141 A2ML1A8K2U0 1454 aa28.72■■■□□ 2.19
SEC22C-212ENST00000454141 TNRQ92752 1358 aa28.71■■■□□ 2.19
SEC22C-212ENST00000454141 NCKAP5LQ9HCH0 1330 aa28.7■■■□□ 2.19
SEC22C-212ENST00000454141 EIF2AK4Q9P2K8 1649 aaKnown RBP28.69■■■□□ 2.18
SEC22C-212ENST00000454141 FBXO31Q5XUX0 539 aaPredicted RBP28.69■■■□□ 2.18
SEC22C-212ENST00000454141 TCOF1Q13428 1488 aaKnown RBP28.69■■■□□ 2.18
SEC22C-212ENST00000454141 PTPN23Q9H3S7 1636 aa28.68■■■□□ 2.18
SEC22C-212ENST00000454141 PKD2Q13563 968 aa28.67■■■□□ 2.18
SEC22C-212ENST00000454141 LTBP4Q8N2S1 1624 aa28.67■■■□□ 2.18
SEC22C-212ENST00000454141 SHANK2Q9UPX8 1470 aa28.66■■■□□ 2.18
SEC22C-212ENST00000454141 DNMT1P26358 1616 aaKnown RBP28.66■■■□□ 2.18
SEC22C-212ENST00000454141 DUOX2Q9NRD8 1548 aa28.65■■■□□ 2.18
SEC22C-212ENST00000454141 ABCC3O15438 1527 aa28.64■■■□□ 2.18
SEC22C-212ENST00000454141 ABCC5O15440 1437 aa28.64■■■□□ 2.18
SEC22C-212ENST00000454141 FGD6Q6ZV73 1430 aa28.64■■■□□ 2.18
SEC22C-212ENST00000454141 CROCC2H7BZ55 1655 aa28.64■■■□□ 2.17
SEC22C-212ENST00000454141 ZC3H13Q5T200 1668 aaKnown RBP28.64■■■□□ 2.17
SEC22C-212ENST00000454141 MROH1Q8NDA8 1641 aa28.61■■■□□ 2.17
SEC22C-212ENST00000454141 KIF15Q9NS87 1388 aa28.61■■■□□ 2.17
SEC22C-212ENST00000454141 DAPK1P53355 1430 aa28.6■■■□□ 2.17
SEC22C-212ENST00000454141 NLRP1Q9C000 1473 aa28.59■■■□□ 2.17
SEC22C-212ENST00000454141 IQSEC2Q5JU85 1478 aa28.57■■■□□ 2.16
SEC22C-212ENST00000454141 ERBINQ96RT1 1412 aa28.56■■■□□ 2.16
SEC22C-212ENST00000454141 ZNF335Q9H4Z2 1342 aaPredicted RBP28.55■■■□□ 2.16
SEC22C-212ENST00000454141 RRP7BPQ9NSQ0 103 aa28.54■■■□□ 2.16
SEC22C-212ENST00000454141 SPATA31D1Q6ZQQ2 1576 aa28.54■■■□□ 2.16
SEC22C-212ENST00000454141 PRDM15P57071 1507 aaPredicted RBP28.53■■■□□ 2.16
SEC22C-212ENST00000454141 UGGT1Q9NYU2 1555 aa28.52■■■□□ 2.16
SEC22C-212ENST00000454141 ERVK-7P63135 1459 aa28.52■■■□□ 2.16
SEC22C-212ENST00000454141 NEURL4Q96JN8 1562 aa28.5■■■□□ 2.15
SEC22C-212ENST00000454141 CEP152O94986 1710 aa28.5■■■□□ 2.15
SEC22C-212ENST00000454141 POLR1AO95602 1720 aaPredicted RBP28.5■■■□□ 2.15
SEC22C-212ENST00000454141 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.5■■■□□ 2.15
SEC22C-212ENST00000454141 THEMISQ8N1K5 641 aaPredicted RBP28.49■■■□□ 2.15
SEC22C-212ENST00000454141 ANKRD30AQ9BXX3 1397 aa28.47■■■□□ 2.15
SEC22C-212ENST00000454141 ANKLE2Q86XL3 938 aa28.45■■■□□ 2.14
SEC22C-212ENST00000454141 CHIC2Q9UKJ5 165 aa28.45■■■□□ 2.14
SEC22C-212ENST00000454141 DEPDC5O75140 1603 aa28.44■■■□□ 2.14
SEC22C-212ENST00000454141 ARHGAP31Q2M1Z3 1444 aa28.43■■■□□ 2.14
SEC22C-212ENST00000454141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.4■■■□□ 2.14
SEC22C-212ENST00000454141 MED14O60244 1454 aa28.4■■■□□ 2.14
SEC22C-212ENST00000454141 ADGRL2O95490 1459 aa28.4■■■□□ 2.14
SEC22C-212ENST00000454141 KANK1Q14678 1352 aa28.39■■■□□ 2.14
SEC22C-212ENST00000454141 FAM50AQ14320 339 aaKnown RBP28.39■■■□□ 2.14
SEC22C-212ENST00000454141 NPHP4O75161 1426 aaPredicted RBP28.38■■■□□ 2.13
SEC22C-212ENST00000454141 LMTK2Q8IWU2 1503 aa28.34■■■□□ 2.13
SEC22C-212ENST00000454141 CPS1P31327 1500 aa28.33■■■□□ 2.13
SEC22C-212ENST00000454141 VWDEQ8N2E2 1590 aa28.33■■■□□ 2.13
SEC22C-212ENST00000454141 UBR1Q8IWV7 1749 aa28.32■■■□□ 2.12
SEC22C-212ENST00000454141 UBAP1LF5GYI3 381 aa28.31■■■□□ 2.12
SEC22C-212ENST00000454141 IQGAP1P46940 1657 aa28.31■■■□□ 2.12
SEC22C-212ENST00000454141 CFAP65Q6ZU64 1925 aaKnown RBP28.28■■■□□ 2.12
SEC22C-212ENST00000454141 ANKRD50Q9ULJ7 1429 aa28.26■■■□□ 2.12
SEC22C-212ENST00000454141 EFCAB6Q5THR3 1501 aa28.26■■■□□ 2.11
SEC22C-212ENST00000454141 SCAF11Q99590 1463 aaKnown RBP28.26■■■□□ 2.11
SEC22C-212ENST00000454141 ARHGAP23Q9P227 1491 aa28.26■■■□□ 2.11
SEC22C-212ENST00000454141 SLIT1O75093 1534 aa28.25■■■□□ 2.11
SEC22C-212ENST00000454141 PIK3C2BO00750 1634 aa28.23■■■□□ 2.11
SEC22C-212ENST00000454141 SYNMO15061 1565 aa28.2■■■□□ 2.1
SEC22C-212ENST00000454141 NOS1P29475 1434 aa28.19■■■□□ 2.1
SEC22C-212ENST00000454141 LTKP29376 864 aa28.18■■■□□ 2.1
SEC22C-212ENST00000454141 TXNDC2Q86VQ3 553 aa28.18■■■□□ 2.1
SEC22C-212ENST00000454141 STAG3Q9UJ98 1225 aa28.17■■■□□ 2.1
SEC22C-212ENST00000454141 KDM5AP29375 1690 aaKnown RBP28.16■■■□□ 2.1
SEC22C-212ENST00000454141 TMEM2Q9UHN6 1383 aa28.16■■■□□ 2.1
SEC22C-212ENST00000454141 EID1Q9Y6B2 187 aa28.16■■■□□ 2.1
SEC22C-212ENST00000454141 ROCK1Q13464 1354 aa28.15■■■□□ 2.1
SEC22C-212ENST00000454141 DISP3Q9P2K9 1392 aa28.15■■■□□ 2.1
SEC22C-212ENST00000454141 IDI1Q13907 227 aa28.15■■■□□ 2.1
SEC22C-212ENST00000454141 RPRD2Q5VT52 1461 aaKnown RBP28.15■■■□□ 2.1
SEC22C-212ENST00000454141 TOM1O60784 492 aa28.13■■■□□ 2.09
SEC22C-212ENST00000454141 UNC13BO14795 1591 aa28.12■■■□□ 2.09
SEC22C-212ENST00000454141 ADGRB3O60242 1522 aa28.12■■■□□ 2.09
SEC22C-212ENST00000454141 STRCP1A6NGW2 1772 aa28.11■■■□□ 2.09
SEC22C-212ENST00000454141 TET3O43151 1660 aa28.11■■■□□ 2.09
SEC22C-212ENST00000454141 LRRC7Q96NW7 1537 aa28.11■■■□□ 2.09
SEC22C-212ENST00000454141 SCAF1Q9H7N4 1312 aaKnown RBP28.1■■■□□ 2.09
SEC22C-212ENST00000454141 PIP4K2BP78356 416 aa28.09■■■□□ 2.09
SEC22C-212ENST00000454141 PPARGC1BQ86YN6 1023 aaKnown RBP28.09■■■□□ 2.09
SEC22C-212ENST00000454141 SLC52A1Q9NWF4 448 aa28.09■■■□□ 2.09
SEC22C-212ENST00000454141 GCC2Q8IWJ2 1684 aa28.04■■■□□ 2.08
SEC22C-212ENST00000454141 ALKQ9UM73 1620 aa28.04■■■□□ 2.08
SEC22C-212ENST00000454141 ITGAEP38570 1179 aa28.04■■■□□ 2.08
SEC22C-212ENST00000454141 IQGAP3Q86VI3 1631 aa28■■■□□ 2.07
SEC22C-212ENST00000454141 HSPA1LP34931 641 aa28■■■□□ 2.07
SEC22C-212ENST00000454141 E9PCH4 1651 aa27.97■■■□□ 2.07
SEC22C-212ENST00000454141 ILDR2Q71H61 639 aa27.95■■■□□ 2.06
SEC22C-212ENST00000454141 NUP155O75694 1391 aa27.95■■■□□ 2.06
SEC22C-212ENST00000454141 ZFYVE9O95405 1425 aa27.94■■■□□ 2.06
SEC22C-212ENST00000454141 SLC26A8Q96RN1 970 aa27.94■■■□□ 2.06
SEC22C-212ENST00000454141 TMEM131LA2VDJ0 1609 aa27.93■■■□□ 2.06
SEC22C-212ENST00000454141 RRBP1Q9P2E9 1410 aaKnown RBP27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms