RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 PROCA1Q8NCQ7 364 aaPredicted RBP7.77□□□□□ -1.17
HMGN3P1-201ENST00000453847 L3MBTL3Q96JM7 780 aaPredicted RBP7.77□□□□□ -1.17
HMGN3P1-201ENST00000453847 G3V3G9 751 aa7.76□□□□□ -1.17
HMGN3P1-201ENST00000453847 MDM2Q00987 491 aaPredicted RBP7.76□□□□□ -1.17
HMGN3P1-201ENST00000453847 EN1Q05925 392 aaPredicted RBP7.76□□□□□ -1.17
HMGN3P1-201ENST00000453847 SSTR3P32745 418 aaPredicted RBP7.75□□□□□ -1.17
HMGN3P1-201ENST00000453847 SKIV2LQ15477 1246 aaKnown RBP7.75□□□□□ -1.17
HMGN3P1-201ENST00000453847 TSR1Q2NL82 804 aaKnown RBP7.75□□□□□ -1.17
HMGN3P1-201ENST00000453847 CLCN1P35523 988 aa7.74□□□□□ -1.17
HMGN3P1-201ENST00000453847 FAM161AQ3B820 660 aa7.74□□□□□ -1.17
HMGN3P1-201ENST00000453847 FNBP4Q8N3X1 1017 aaPredicted RBP7.74□□□□□ -1.17
HMGN3P1-201ENST00000453847 CCDC82Q8N4S0 544 aa7.74□□□□□ -1.17
HMGN3P1-201ENST00000453847 POM121Q96HA1 1249 aa7.74□□□□□ -1.17
HMGN3P1-201ENST00000453847 GPCPD1Q9NPB8 672 aa7.74□□□□□ -1.17
HMGN3P1-201ENST00000453847 PCDHGA10Q9Y5H3 936 aa7.74□□□□□ -1.17
HMGN3P1-201ENST00000453847 PHF14O94880 888 aa7.73□□□□□ -1.17
HMGN3P1-201ENST00000453847 SLC34A2O95436 690 aa7.73□□□□□ -1.17
HMGN3P1-201ENST00000453847 CLCN6P51797 869 aa7.73□□□□□ -1.17
HMGN3P1-201ENST00000453847 FBXO31Q5XUX0 539 aaPredicted RBP7.73□□□□□ -1.17
HMGN3P1-201ENST00000453847 NLRP7Q8WX94 980 aa7.73□□□□□ -1.17
HMGN3P1-201ENST00000453847 RBM33Q96EV2 1170 aaKnown RBP7.72□□□□□ -1.17
HMGN3P1-201ENST00000453847 KDM4FA0A1W2PPD8 638 aa7.71□□□□□ -1.18
HMGN3P1-201ENST00000453847 EPAS1Q99814 870 aa7.71□□□□□ -1.18
HMGN3P1-201ENST00000453847 BEGAINQ9BUH8 593 aa7.71□□□□□ -1.18
HMGN3P1-201ENST00000453847 FAM217BQ9NTX9 383 aaPredicted RBP7.71□□□□□ -1.18
HMGN3P1-201ENST00000453847 HAX1O00165 279 aa7.7□□□□□ -1.18
HMGN3P1-201ENST00000453847 MAP3K7O43318 606 aa7.7□□□□□ -1.18
HMGN3P1-201ENST00000453847 NECTIN2Q92692 538 aa7.7□□□□□ -1.18
HMGN3P1-201ENST00000453847 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.7□□□□□ -1.18
HMGN3P1-201ENST00000453847 POLR3EQ9NVU0 708 aa7.7□□□□□ -1.18
HMGN3P1-201ENST00000453847 ZNF777Q9ULD5 760 aaPredicted RBP7.7□□□□□ -1.18
HMGN3P1-201ENST00000453847 METTL3Q86U44 580 aaKnown RBP7.69□□□□□ -1.18
HMGN3P1-201ENST00000453847 MYSM1Q5VVJ2 828 aa7.68□□□□□ -1.18
HMGN3P1-201ENST00000453847 PROSER2Q86WR7 435 aaPredicted RBP7.68□□□□□ -1.18
HMGN3P1-201ENST00000453847 SLAIN1Q8ND83 568 aa7.68□□□□□ -1.18
HMGN3P1-201ENST00000453847 TTC13Q8NBP0 860 aa7.67□□□□□ -1.18
HMGN3P1-201ENST00000453847 PXYLP1Q8TE99 480 aa7.67□□□□□ -1.18
HMGN3P1-201ENST00000453847 ADGRG1Q9Y653 693 aa7.67□□□□□ -1.18
HMGN3P1-201ENST00000453847 TYW1BQ6NUM6 668 aa7.66□□□□□ -1.18
HMGN3P1-201ENST00000453847 SNRKQ9NRH2 765 aa7.66□□□□□ -1.18
HMGN3P1-201ENST00000453847 SEC24BO95487 1268 aa7.65□□□□□ -1.18
HMGN3P1-201ENST00000453847 PADI6Q6TGC4 694 aa7.65□□□□□ -1.18
HMGN3P1-201ENST00000453847 COG6Q9Y2V7 657 aa7.65□□□□□ -1.18
HMGN3P1-201ENST00000453847 PCDHGA4Q9Y5G9 962 aa7.65□□□□□ -1.18
HMGN3P1-201ENST00000453847 GABBR2O75899 941 aa7.64□□□□□ -1.19
HMGN3P1-201ENST00000453847 PDIA4P13667 645 aaKnown RBP7.64□□□□□ -1.19
HMGN3P1-201ENST00000453847 OATP04181 439 aa7.63□□□□□ -1.19
HMGN3P1-201ENST00000453847 TBC1D2Q9BYX2 928 aa7.63□□□□□ -1.19
HMGN3P1-201ENST00000453847 FOSBP53539 338 aa7.62□□□□□ -1.19
HMGN3P1-201ENST00000453847 C6orf132Q5T0Z8 1188 aa7.62□□□□□ -1.19
HMGN3P1-201ENST00000453847 JPH4Q96JJ6 628 aa7.62□□□□□ -1.19
HMGN3P1-201ENST00000453847 SPDYE5A6NIY4 337 aa7.61□□□□□ -1.19
HMGN3P1-201ENST00000453847 RFC5P40937 340 aa7.61□□□□□ -1.19
HMGN3P1-201ENST00000453847 LIMD1Q9UGP4 676 aa7.61□□□□□ -1.19
HMGN3P1-201ENST00000453847 CLK2P49760 499 aaKnown RBP7.6□□□□□ -1.19
HMGN3P1-201ENST00000453847 SLC39A7Q92504 469 aa7.6□□□□□ -1.19
HMGN3P1-201ENST00000453847 FBXW7Q969H0 707 aa7.6□□□□□ -1.19
HMGN3P1-201ENST00000453847 PLSCR2Q9NRY7 297 aa7.6□□□□□ -1.19
HMGN3P1-201ENST00000453847 FAM198AQ9UFP1 575 aa7.6□□□□□ -1.19
HMGN3P1-201ENST00000453847 C7P10643 843 aa7.59□□□□□ -1.19
HMGN3P1-201ENST00000453847 PPP2R2DQ66LE6 453 aa7.59□□□□□ -1.19
HMGN3P1-201ENST00000453847 BANK1Q8NDB2 785 aa7.59□□□□□ -1.19
HMGN3P1-201ENST00000453847 POTEIP0CG38 1075 aa7.58□□□□□ -1.2
HMGN3P1-201ENST00000453847 C3orf67Q6ZVT6 689 aa7.58□□□□□ -1.2
HMGN3P1-201ENST00000453847 ADAM33Q9BZ11 813 aa7.58□□□□□ -1.2
HMGN3P1-201ENST00000453847 SERPINA10Q9UK55 444 aa7.58□□□□□ -1.2
HMGN3P1-201ENST00000453847 C3orf80F5H4A9 247 aa7.57□□□□□ -1.2
HMGN3P1-201ENST00000453847 RAD21O60216 631 aa7.57□□□□□ -1.2
HMGN3P1-201ENST00000453847 PRSS12P56730 875 aa7.57□□□□□ -1.2
HMGN3P1-201ENST00000453847 MTMR14Q8NCE2 650 aa7.57□□□□□ -1.2
HMGN3P1-201ENST00000453847 CERKQ8TCT0 537 aa7.57□□□□□ -1.2
HMGN3P1-201ENST00000453847 SPIRE2Q8WWL2 714 aa7.57□□□□□ -1.2
HMGN3P1-201ENST00000453847 TRAIPQ9BWF2 469 aa7.57□□□□□ -1.2
HMGN3P1-201ENST00000453847 METRNQ9UJH8 293 aa7.57□□□□□ -1.2
HMGN3P1-201ENST00000453847 RIC3Q7Z5B4 369 aa7.56□□□□□ -1.2
HMGN3P1-201ENST00000453847 NPM2Q86SE8 214 aaKnown RBP7.56□□□□□ -1.2
HMGN3P1-201ENST00000453847 KHSRPQ92945 711 aaKnown RBP eCLIP7.56□□□□□ -1.2
HMGN3P1-201ENST00000453847 ZDHHC16Q969W1 377 aa7.56□□□□□ -1.2
HMGN3P1-201ENST00000453847 RBM27Q9P2N5 1060 aaKnown RBP7.56□□□□□ -1.2
HMGN3P1-201ENST00000453847 ATP1B4Q9UN42 357 aaPredicted RBP7.56□□□□□ -1.2
HMGN3P1-201ENST00000453847 DCBLD2Q96PD2 775 aa7.55□□□□□ -1.2
HMGN3P1-201ENST00000453847 EYA1Q99502 592 aa7.55□□□□□ -1.2
HMGN3P1-201ENST00000453847 SPTLC1O15269 473 aa7.54□□□□□ -1.2
HMGN3P1-201ENST00000453847 TMEM259Q4ZIN3 620 aa7.54□□□□□ -1.2
HMGN3P1-201ENST00000453847 ZNF454Q8N9F8 522 aa7.54□□□□□ -1.2
HMGN3P1-201ENST00000453847 CDCA7LQ96GN5 454 aa7.54□□□□□ -1.2
HMGN3P1-201ENST00000453847 GDPD2Q9HCC8 539 aa7.54□□□□□ -1.2
HMGN3P1-201ENST00000453847 ZNF330Q9Y3S2 320 aaPredicted RBP7.54□□□□□ -1.2
HMGN3P1-201ENST00000453847 ZBTB7CA1YPR0 619 aa7.53□□□□□ -1.2
HMGN3P1-201ENST00000453847 RCCD1A6NED2 376 aa7.53□□□□□ -1.2
HMGN3P1-201ENST00000453847 CD46P15529 392 aa7.53□□□□□ -1.2
HMGN3P1-201ENST00000453847 COL9A1P20849 921 aa7.53□□□□□ -1.2
HMGN3P1-201ENST00000453847 TUSC1Q2TAM9 212 aa7.53□□□□□ -1.2
HMGN3P1-201ENST00000453847 CCDC97Q96F63 343 aaPredicted RBP7.53□□□□□ -1.2
HMGN3P1-201ENST00000453847 QPCTQ16769 361 aa7.52□□□□□ -1.21
HMGN3P1-201ENST00000453847 RBM46Q8TBY0 533 aaKnown RBP7.52□□□□□ -1.21
HMGN3P1-201ENST00000453847 PCDHB15Q9Y5E8 787 aa7.52□□□□□ -1.21
HMGN3P1-201ENST00000453847 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.51□□□□□ -1.21
HMGN3P1-201ENST00000453847 MOXD2PA6NHM9 499 aa7.51□□□□□ -1.21
HMGN3P1-201ENST00000453847 NUDT7P0C024 238 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms