RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 PTPRTO14522 1441 aa26.57■■□□□ 1.84
TNFRSF4-202ENST00000453580 ZNF142P52746 1687 aaPredicted RBP26.57■■□□□ 1.84
TNFRSF4-202ENST00000453580 MYO3AQ8NEV4 1616 aa26.57■■□□□ 1.84
TNFRSF4-202ENST00000453580 SHANK2Q9UPX8 1470 aa26.56■■□□□ 1.84
TNFRSF4-202ENST00000453580 NCOA1Q15788 1441 aa26.54■■□□□ 1.84
TNFRSF4-202ENST00000453580 FGD6Q6ZV73 1430 aa26.54■■□□□ 1.84
TNFRSF4-202ENST00000453580 DUOX2Q9NRD8 1548 aa26.54■■□□□ 1.84
TNFRSF4-202ENST00000453580 RNF17Q9BXT8 1623 aaKnown RBP26.54■■□□□ 1.84
TNFRSF4-202ENST00000453580 CEP170BQ9Y4F5 1589 aaPredicted RBP26.53■■□□□ 1.84
TNFRSF4-202ENST00000453580 CROCC2H7BZ55 1655 aa26.53■■□□□ 1.84
TNFRSF4-202ENST00000453580 ZC3H13Q5T200 1668 aaKnown RBP26.53■■□□□ 1.84
TNFRSF4-202ENST00000453580 PZPP20742 1482 aa26.52■■□□□ 1.84
TNFRSF4-202ENST00000453580 CAMSAP1Q5T5Y3 1602 aa26.52■■□□□ 1.84
TNFRSF4-202ENST00000453580 TCOF1Q13428 1488 aaKnown RBP26.51■■□□□ 1.83
TNFRSF4-202ENST00000453580 CERKQ8TCT0 537 aa26.5■■□□□ 1.83
TNFRSF4-202ENST00000453580 DNMT1P26358 1616 aaKnown RBP26.5■■□□□ 1.83
TNFRSF4-202ENST00000453580 PLA2R1Q13018 1463 aa26.49■■□□□ 1.83
TNFRSF4-202ENST00000453580 PKD2Q13563 968 aa26.49■■□□□ 1.83
TNFRSF4-202ENST00000453580 A2ML1A8K2U0 1454 aa26.48■■□□□ 1.83
TNFRSF4-202ENST00000453580 ABCC5O15440 1437 aa26.48■■□□□ 1.83
TNFRSF4-202ENST00000453580 DAPK1P53355 1430 aa26.48■■□□□ 1.83
TNFRSF4-202ENST00000453580 TNRQ92752 1358 aa26.47■■□□□ 1.83
TNFRSF4-202ENST00000453580 ERBINQ96RT1 1412 aa26.46■■□□□ 1.83
TNFRSF4-202ENST00000453580 KIF15Q9NS87 1388 aa26.46■■□□□ 1.83
TNFRSF4-202ENST00000453580 ANKRD30AQ9BXX3 1397 aa26.44■■□□□ 1.82
TNFRSF4-202ENST00000453580 NLRP1Q9C000 1473 aa26.42■■□□□ 1.82
TNFRSF4-202ENST00000453580 ABCC3O15438 1527 aa26.41■■□□□ 1.82
TNFRSF4-202ENST00000453580 FBXO31Q5XUX0 539 aaPredicted RBP26.4■■□□□ 1.82
TNFRSF4-202ENST00000453580 RRP7BPQ9NSQ0 103 aa26.39■■□□□ 1.82
TNFRSF4-202ENST00000453580 KANK1Q14678 1352 aa26.37■■□□□ 1.81
TNFRSF4-202ENST00000453580 THEMISQ8N1K5 641 aaPredicted RBP26.37■■□□□ 1.81
TNFRSF4-202ENST00000453580 NCKAP5LQ9HCH0 1330 aa26.36■■□□□ 1.81
TNFRSF4-202ENST00000453580 MROH1Q8NDA8 1641 aa26.36■■□□□ 1.81
TNFRSF4-202ENST00000453580 PRDM15P57071 1507 aaPredicted RBP26.35■■□□□ 1.81
TNFRSF4-202ENST00000453580 FAM50AQ14320 339 aaKnown RBP26.35■■□□□ 1.81
TNFRSF4-202ENST00000453580 CEP152O94986 1710 aa26.34■■□□□ 1.81
TNFRSF4-202ENST00000453580 SPATA31D1Q6ZQQ2 1576 aa26.33■■□□□ 1.81
TNFRSF4-202ENST00000453580 UGGT1Q9NYU2 1555 aa26.32■■□□□ 1.8
TNFRSF4-202ENST00000453580 DEPDC5O75140 1603 aa26.32■■□□□ 1.8
TNFRSF4-202ENST00000453580 IQSEC2Q5JU85 1478 aa26.31■■□□□ 1.8
TNFRSF4-202ENST00000453580 CHIC2Q9UKJ5 165 aa26.31■■□□□ 1.8
TNFRSF4-202ENST00000453580 POLR1AO95602 1720 aaPredicted RBP26.31■■□□□ 1.8
TNFRSF4-202ENST00000453580 ARHGAP31Q2M1Z3 1444 aa26.31■■□□□ 1.8
TNFRSF4-202ENST00000453580 ADGRL2O95490 1459 aa26.3■■□□□ 1.8
TNFRSF4-202ENST00000453580 ANKLE2Q86XL3 938 aa26.29■■□□□ 1.8
TNFRSF4-202ENST00000453580 ERVK-7P63135 1459 aa26.29■■□□□ 1.8
TNFRSF4-202ENST00000453580 LTBP4Q8N2S1 1624 aa26.28■■□□□ 1.8
TNFRSF4-202ENST00000453580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.26■■□□□ 1.79
TNFRSF4-202ENST00000453580 CFAP65Q6ZU64 1925 aaKnown RBP26.25■■□□□ 1.79
TNFRSF4-202ENST00000453580 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.22■■□□□ 1.79
TNFRSF4-202ENST00000453580 LMTK2Q8IWU2 1503 aa26.21■■□□□ 1.79
TNFRSF4-202ENST00000453580 ANKRD50Q9ULJ7 1429 aa26.19■■□□□ 1.78
TNFRSF4-202ENST00000453580 ZNF335Q9H4Z2 1342 aaPredicted RBP26.18■■□□□ 1.78
TNFRSF4-202ENST00000453580 VWDEQ8N2E2 1590 aa26.18■■□□□ 1.78
TNFRSF4-202ENST00000453580 MED14O60244 1454 aa26.17■■□□□ 1.78
TNFRSF4-202ENST00000453580 NEURL4Q96JN8 1562 aa26.17■■□□□ 1.78
TNFRSF4-202ENST00000453580 UBR1Q8IWV7 1749 aa26.15■■□□□ 1.78
TNFRSF4-202ENST00000453580 ROCK1Q13464 1354 aa26.15■■□□□ 1.78
TNFRSF4-202ENST00000453580 NPHP4O75161 1426 aaPredicted RBP26.14■■□□□ 1.78
TNFRSF4-202ENST00000453580 CPS1P31327 1500 aa26.12■■□□□ 1.77
TNFRSF4-202ENST00000453580 STAG3Q9UJ98 1225 aa26.11■■□□□ 1.77
TNFRSF4-202ENST00000453580 KDM5AP29375 1690 aaKnown RBP26.11■■□□□ 1.77
TNFRSF4-202ENST00000453580 IQGAP1P46940 1657 aa26.11■■□□□ 1.77
TNFRSF4-202ENST00000453580 RPRD2Q5VT52 1461 aaKnown RBP26.11■■□□□ 1.77
TNFRSF4-202ENST00000453580 EFCAB6Q5THR3 1501 aa26.1■■□□□ 1.77
TNFRSF4-202ENST00000453580 EID1Q9Y6B2 187 aa26.09■■□□□ 1.77
TNFRSF4-202ENST00000453580 SLIT1O75093 1534 aa26.07■■□□□ 1.76
TNFRSF4-202ENST00000453580 SCAF11Q99590 1463 aaKnown RBP26.06■■□□□ 1.76
TNFRSF4-202ENST00000453580 SLC52A1Q9NWF4 448 aa26.06■■□□□ 1.76
TNFRSF4-202ENST00000453580 TET3O43151 1660 aa26.06■■□□□ 1.76
TNFRSF4-202ENST00000453580 PIK3C2BO00750 1634 aa26.05■■□□□ 1.76
TNFRSF4-202ENST00000453580 ARHGAP23Q9P227 1491 aa26.04■■□□□ 1.76
TNFRSF4-202ENST00000453580 UNC13BO14795 1591 aa26.04■■□□□ 1.76
TNFRSF4-202ENST00000453580 TXNDC2Q86VQ3 553 aa26.03■■□□□ 1.76
TNFRSF4-202ENST00000453580 NOS1P29475 1434 aa26.03■■□□□ 1.76
TNFRSF4-202ENST00000453580 GCC2Q8IWJ2 1684 aa26.03■■□□□ 1.76
TNFRSF4-202ENST00000453580 UBAP1LF5GYI3 381 aa26.01■■□□□ 1.75
TNFRSF4-202ENST00000453580 IDI1Q13907 227 aa26■■□□□ 1.75
TNFRSF4-202ENST00000453580 TMEM2Q9UHN6 1383 aa25.99■■□□□ 1.75
TNFRSF4-202ENST00000453580 ITGAEP38570 1179 aa25.99■■□□□ 1.75
TNFRSF4-202ENST00000453580 PPARGC1BQ86YN6 1023 aaKnown RBP25.99■■□□□ 1.75
TNFRSF4-202ENST00000453580 SYNMO15061 1565 aa25.99■■□□□ 1.75
TNFRSF4-202ENST00000453580 TOM1O60784 492 aa25.96■■□□□ 1.75
TNFRSF4-202ENST00000453580 HDGFP51858 240 aaKnown RBP25.95■■□□□ 1.74
TNFRSF4-202ENST00000453580 RRBP1Q9P2E9 1410 aaKnown RBP25.95■■□□□ 1.74
TNFRSF4-202ENST00000453580 IQGAP3Q86VI3 1631 aa25.95■■□□□ 1.74
TNFRSF4-202ENST00000453580 ADGRB3O60242 1522 aa25.94■■□□□ 1.74
TNFRSF4-202ENST00000453580 LTKP29376 864 aa25.93■■□□□ 1.74
TNFRSF4-202ENST00000453580 NUP155O75694 1391 aa25.91■■□□□ 1.74
TNFRSF4-202ENST00000453580 E9PCH4 1651 aa25.87■■□□□ 1.73
TNFRSF4-202ENST00000453580 STRCP1A6NGW2 1772 aa25.83■■□□□ 1.73
TNFRSF4-202ENST00000453580 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.83■■□□□ 1.73
TNFRSF4-202ENST00000453580 LRRC7Q96NW7 1537 aa25.83■■□□□ 1.72
TNFRSF4-202ENST00000453580 SCAF1Q9H7N4 1312 aaKnown RBP25.82■■□□□ 1.72
TNFRSF4-202ENST00000453580 TMEM131LA2VDJ0 1609 aa25.81■■□□□ 1.72
TNFRSF4-202ENST00000453580 PPP1R15AO75807 674 aaPredicted RBP25.8■■□□□ 1.72
TNFRSF4-202ENST00000453580 BCANQ96GW7 911 aa25.8■■□□□ 1.72
TNFRSF4-202ENST00000453580 MYO5BQ9ULV0 1848 aa25.79■■□□□ 1.72
TNFRSF4-202ENST00000453580 CHGAP10645 457 aaKnown RBP25.78■■□□□ 1.72
TNFRSF4-202ENST00000453580 PIP4K2BP78356 416 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms