RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 A2MP01023 1474 aa14.81□□□□□ -0.04
CDC42EP3-203ENST00000453555 PLXNC1O60486 1568 aa14.8□□□□□ -0.04
CDC42EP3-203ENST00000453555 ARHGEF5Q12774 1597 aa14.8□□□□□ -0.04
CDC42EP3-203ENST00000453555 C3P01024 1663 aa14.8□□□□□ -0.04
CDC42EP3-203ENST00000453555 ESF1Q9H501 851 aaKnown RBP14.79□□□□□ -0.04
CDC42EP3-203ENST00000453555 RTEL1-TNFRSF6BF6WH68 1400 aa14.78□□□□□ -0.04
CDC42EP3-203ENST00000453555 LMTK3Q96Q04 1460 aa14.77□□□□□ -0.04
CDC42EP3-203ENST00000453555 MIA2Q96PC5 1412 aa14.77□□□□□ -0.04
CDC42EP3-203ENST00000453555 RSPH4AQ5TD94 716 aa14.77□□□□□ -0.05
CDC42EP3-203ENST00000453555 CLTCQ00610 1675 aaKnown RBP14.77□□□□□ -0.05
CDC42EP3-203ENST00000453555 TSPY4P0CV99 314 aa14.76□□□□□ -0.05
CDC42EP3-203ENST00000453555 TSPY10P0CW01 314 aa14.76□□□□□ -0.05
CDC42EP3-203ENST00000453555 PREX1Q8TCU6 1659 aa14.76□□□□□ -0.05
CDC42EP3-203ENST00000453555 PTPN23Q9H3S7 1636 aa14.76□□□□□ -0.05
CDC42EP3-203ENST00000453555 GGT6Q6P531 493 aa14.75□□□□□ -0.05
CDC42EP3-203ENST00000453555 MROH2AA6NES4 1674 aa14.74□□□□□ -0.05
CDC42EP3-203ENST00000453555 DHX29Q7Z478 1369 aaKnown RBP14.73□□□□□ -0.05
CDC42EP3-203ENST00000453555 HSPA2P54652 639 aa14.73□□□□□ -0.05
CDC42EP3-203ENST00000453555 CROCC2H7BZ55 1655 aa14.73□□□□□ -0.05
CDC42EP3-203ENST00000453555 SETD1BQ9UPS6 1966 aaKnown RBP14.73□□□□□ -0.05
CDC42EP3-203ENST00000453555 MAST1Q9Y2H9 1570 aa14.73□□□□□ -0.05
CDC42EP3-203ENST00000453555 CNTLNQ9NXG0 1405 aa14.72□□□□□ -0.05
CDC42EP3-203ENST00000453555 ATF5Q9Y2D1 282 aaPredicted RBP14.71□□□□□ -0.05
CDC42EP3-203ENST00000453555 FGD6Q6ZV73 1430 aa14.71□□□□□ -0.05
CDC42EP3-203ENST00000453555 KIF3BO15066 747 aa14.7□□□□□ -0.06
CDC42EP3-203ENST00000453555 DNMT1P26358 1616 aaKnown RBP14.69□□□□□ -0.06
CDC42EP3-203ENST00000453555 ZMYM3Q14202 1370 aa14.68□□□□□ -0.06
CDC42EP3-203ENST00000453555 TCOF1Q13428 1488 aaKnown RBP14.68□□□□□ -0.06
CDC42EP3-203ENST00000453555 PPARGC1BQ86YN6 1023 aaKnown RBP14.67□□□□□ -0.06
CDC42EP3-203ENST00000453555 ABCC5O15440 1437 aa14.66□□□□□ -0.06
CDC42EP3-203ENST00000453555 UHRF1BP1Q6BDS2 1440 aa14.66□□□□□ -0.06
CDC42EP3-203ENST00000453555 POLA2Q14181 598 aa14.66□□□□□ -0.06
CDC42EP3-203ENST00000453555 DAPK1P53355 1430 aa14.66□□□□□ -0.06
CDC42EP3-203ENST00000453555 EIF2AK4Q9P2K8 1649 aaKnown RBP14.64□□□□□ -0.07
CDC42EP3-203ENST00000453555 FAM50AQ14320 339 aaKnown RBP14.64□□□□□ -0.07
CDC42EP3-203ENST00000453555 SHANK2Q9UPX8 1470 aa14.63□□□□□ -0.07
CDC42EP3-203ENST00000453555 RRP7BPQ9NSQ0 103 aa14.63□□□□□ -0.07
CDC42EP3-203ENST00000453555 CHIC2Q9UKJ5 165 aa14.63□□□□□ -0.07
CDC42EP3-203ENST00000453555 RNF17Q9BXT8 1623 aaKnown RBP14.63□□□□□ -0.07
CDC42EP3-203ENST00000453555 KDM5DQ9BY66 1539 aa14.62□□□□□ -0.07
CDC42EP3-203ENST00000453555 DUOX2Q9NRD8 1548 aa14.62□□□□□ -0.07
CDC42EP3-203ENST00000453555 STRCQ7RTU9 1775 aa14.62□□□□□ -0.07
CDC42EP3-203ENST00000453555 WASHC2CQ9Y4E1 1318 aa14.62□□□□□ -0.07
CDC42EP3-203ENST00000453555 CEP152O94986 1710 aa14.61□□□□□ -0.07
CDC42EP3-203ENST00000453555 NPATQ14207 1427 aa14.61□□□□□ -0.07
CDC42EP3-203ENST00000453555 MYO3AQ8NEV4 1616 aa14.61□□□□□ -0.07
CDC42EP3-203ENST00000453555 CFAP65Q6ZU64 1925 aaKnown RBP14.6□□□□□ -0.07
CDC42EP3-203ENST00000453555 KIF15Q9NS87 1388 aa14.6□□□□□ -0.07
CDC42EP3-203ENST00000453555 PTPRKQ15262 1439 aa14.6□□□□□ -0.07
CDC42EP3-203ENST00000453555 MROH1Q8NDA8 1641 aa14.59□□□□□ -0.07
CDC42EP3-203ENST00000453555 ZC3H13Q5T200 1668 aaKnown RBP14.58□□□□□ -0.07
CDC42EP3-203ENST00000453555 FAM135AQ9P2D6 1515 aa14.58□□□□□ -0.08
CDC42EP3-203ENST00000453555 ZNF142P52746 1687 aaPredicted RBP14.58□□□□□ -0.08
CDC42EP3-203ENST00000453555 FBXO31Q5XUX0 539 aaPredicted RBP14.57□□□□□ -0.08
CDC42EP3-203ENST00000453555 ANKRD30AQ9BXX3 1397 aa14.57□□□□□ -0.08
CDC42EP3-203ENST00000453555 ERBINQ96RT1 1412 aa14.56□□□□□ -0.08
CDC42EP3-203ENST00000453555 PZPP20742 1482 aa14.56□□□□□ -0.08
CDC42EP3-203ENST00000453555 ABCC3O15438 1527 aa14.56□□□□□ -0.08
CDC42EP3-203ENST00000453555 CEP170BQ9Y4F5 1589 aaPredicted RBP14.56□□□□□ -0.08
CDC42EP3-203ENST00000453555 CAMSAP1Q5T5Y3 1602 aa14.55□□□□□ -0.08
CDC42EP3-203ENST00000453555 NCOA1Q15788 1441 aa14.54□□□□□ -0.08
CDC42EP3-203ENST00000453555 DEPDC5O75140 1603 aa14.53□□□□□ -0.08
CDC42EP3-203ENST00000453555 ADGRL2O95490 1459 aa14.53□□□□□ -0.08
CDC42EP3-203ENST00000453555 PRDM15P57071 1507 aaPredicted RBP14.52□□□□□ -0.08
CDC42EP3-203ENST00000453555 TNRQ92752 1358 aa14.52□□□□□ -0.08
CDC42EP3-203ENST00000453555 ITGAEP38570 1179 aa14.52□□□□□ -0.09
CDC42EP3-203ENST00000453555 A2ML1A8K2U0 1454 aa14.5□□□□□ -0.09
CDC42EP3-203ENST00000453555 ILDR1Q86SU0 546 aaPredicted RBP14.5□□□□□ -0.09
CDC42EP3-203ENST00000453555 NCKAP5LQ9HCH0 1330 aa14.49□□□□□ -0.09
CDC42EP3-203ENST00000453555 KANK1Q14678 1352 aa14.48□□□□□ -0.09
CDC42EP3-203ENST00000453555 SPATA31D1Q6ZQQ2 1576 aa14.47□□□□□ -0.09
CDC42EP3-203ENST00000453555 ERVK-7P63135 1459 aa14.47□□□□□ -0.09
CDC42EP3-203ENST00000453555 POLR1AO95602 1720 aaPredicted RBP14.46□□□□□ -0.09
CDC42EP3-203ENST00000453555 PTPRTO14522 1441 aa14.46□□□□□ -0.09
CDC42EP3-203ENST00000453555 ANKRD50Q9ULJ7 1429 aa14.46□□□□□ -0.09
CDC42EP3-203ENST00000453555 PLA2R1Q13018 1463 aa14.45□□□□□ -0.1
CDC42EP3-203ENST00000453555 VWDEQ8N2E2 1590 aa14.45□□□□□ -0.1
CDC42EP3-203ENST00000453555 UGGT1Q9NYU2 1555 aa14.45□□□□□ -0.1
CDC42EP3-203ENST00000453555 NLRP1Q9C000 1473 aa14.44□□□□□ -0.1
CDC42EP3-203ENST00000453555 ATXN8OSP0DMR3 200 aa14.44□□□□□ -0.1
CDC42EP3-203ENST00000453555 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.44□□□□□ -0.1
CDC42EP3-203ENST00000453555 ROCK1Q13464 1354 aa14.43□□□□□ -0.1
CDC42EP3-203ENST00000453555 ARHGAP31Q2M1Z3 1444 aa14.42□□□□□ -0.1
CDC42EP3-203ENST00000453555 LMTK2Q8IWU2 1503 aa14.42□□□□□ -0.1
CDC42EP3-203ENST00000453555 UBR1Q8IWV7 1749 aa14.42□□□□□ -0.1
CDC42EP3-203ENST00000453555 PKD2Q13563 968 aa14.42□□□□□ -0.1
CDC42EP3-203ENST00000453555 UNC13BO14795 1591 aa14.42□□□□□ -0.1
CDC42EP3-203ENST00000453555 RRBP1Q9P2E9 1410 aaKnown RBP14.41□□□□□ -0.1
CDC42EP3-203ENST00000453555 THEMISQ8N1K5 641 aaPredicted RBP14.41□□□□□ -0.1
CDC42EP3-203ENST00000453555 CERKQ8TCT0 537 aa14.41□□□□□ -0.1
CDC42EP3-203ENST00000453555 EFCAB6Q5THR3 1501 aa14.41□□□□□ -0.1
CDC42EP3-203ENST00000453555 GCC2Q8IWJ2 1684 aa14.4□□□□□ -0.1
CDC42EP3-203ENST00000453555 FBXO41Q8TF61 875 aa14.4□□□□□ -0.1
CDC42EP3-203ENST00000453555 PIK3C2BO00750 1634 aa14.4□□□□□ -0.1
CDC42EP3-203ENST00000453555 TET3O43151 1660 aa14.39□□□□□ -0.11
CDC42EP3-203ENST00000453555 NEURL4Q96JN8 1562 aa14.39□□□□□ -0.11
CDC42EP3-203ENST00000453555 SYNMO15061 1565 aa14.38□□□□□ -0.11
CDC42EP3-203ENST00000453555 LTBP4Q8N2S1 1624 aa14.37□□□□□ -0.11
CDC42EP3-203ENST00000453555 ANKLE2Q86XL3 938 aa14.37□□□□□ -0.11
CDC42EP3-203ENST00000453555 RBM42Q9BTD8 480 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms