RNA–Protein interactions for RNA: ENST00000453135.1

LINC01647-201, Transcript of long intergenic non-protein coding RNA 1647, humanhuman

TSL 1 (best) BASIC

Gene LINC01647, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01647-201ENST00000453135 KIDINS220Q9ULH0 1771 aa13.24□□□□□ -0.29
LINC01647-201ENST00000453135 DNMT1P26358 1616 aaKnown RBP13.23□□□□□ -0.29
LINC01647-201ENST00000453135 INO80Q9ULG1 1556 aaPredicted RBP13.23□□□□□ -0.29
LINC01647-201ENST00000453135 SHANK2Q9UPX8 1470 aa13.23□□□□□ -0.29
LINC01647-201ENST00000453135 DIP2CQ9Y2E4 1556 aa13.22□□□□□ -0.29
LINC01647-201ENST00000453135 ABCA6Q8N139 1617 aa13.21□□□□□ -0.29
LINC01647-201ENST00000453135 MAST1Q9Y2H9 1570 aa13.21□□□□□ -0.29
LINC01647-201ENST00000453135 RRP7BPQ9NSQ0 103 aa13.2□□□□□ -0.3
LINC01647-201ENST00000453135 A2MP01023 1474 aa13.2□□□□□ -0.3
LINC01647-201ENST00000453135 DHX29Q7Z478 1369 aaKnown RBP13.2□□□□□ -0.3
LINC01647-201ENST00000453135 ANKRD30AQ9BXX3 1397 aa13.2□□□□□ -0.3
LINC01647-201ENST00000453135 PTPRKQ15262 1439 aa13.19□□□□□ -0.3
LINC01647-201ENST00000453135 REREQ9P2R6 1566 aa13.18□□□□□ -0.3
LINC01647-201ENST00000453135 KIF15Q9NS87 1388 aa13.18□□□□□ -0.3
LINC01647-201ENST00000453135 CROCC2H7BZ55 1655 aa13.18□□□□□ -0.3
LINC01647-201ENST00000453135 NCOA1Q15788 1441 aa13.17□□□□□ -0.3
LINC01647-201ENST00000453135 MLECQ14165 292 aa13.17□□□□□ -0.3
LINC01647-201ENST00000453135 ADGRL2O95490 1459 aa13.16□□□□□ -0.3
LINC01647-201ENST00000453135 ABCB7O75027 752 aa13.16□□□□□ -0.3
LINC01647-201ENST00000453135 AGLP35573 1532 aa13.16□□□□□ -0.3
LINC01647-201ENST00000453135 PLXNC1O60486 1568 aa13.15□□□□□ -0.3
LINC01647-201ENST00000453135 ADGBQ8N7X0 1667 aa13.15□□□□□ -0.3
LINC01647-201ENST00000453135 KIF3BO15066 747 aa13.15□□□□□ -0.3
LINC01647-201ENST00000453135 ROCK1Q13464 1354 aa13.15□□□□□ -0.3
LINC01647-201ENST00000453135 DSG3P32926 999 aa13.14□□□□□ -0.31
LINC01647-201ENST00000453135 DUOX2Q9NRD8 1548 aa13.13□□□□□ -0.31
LINC01647-201ENST00000453135 KDM4FA0A1W2PPD8 638 aa13.13□□□□□ -0.31
LINC01647-201ENST00000453135 GGT6Q6P531 493 aa13.13□□□□□ -0.31
LINC01647-201ENST00000453135 SIGLEC1Q9BZZ2 1709 aa13.13□□□□□ -0.31
LINC01647-201ENST00000453135 POLA2Q14181 598 aa13.12□□□□□ -0.31
LINC01647-201ENST00000453135 ESF1Q9H501 851 aaKnown RBP13.11□□□□□ -0.31
LINC01647-201ENST00000453135 ERBINQ96RT1 1412 aa13.11□□□□□ -0.31
LINC01647-201ENST00000453135 BCORL1Q5H9F3 1711 aa13.1□□□□□ -0.31
LINC01647-201ENST00000453135 ANKRD50Q9ULJ7 1429 aa13.1□□□□□ -0.31
LINC01647-201ENST00000453135 ADAMTSL3P82987 1691 aa13.07□□□□□ -0.32
LINC01647-201ENST00000453135 EIF2AK4Q9P2K8 1649 aaKnown RBP13.06□□□□□ -0.32
LINC01647-201ENST00000453135 WASHC2CQ9Y4E1 1318 aa13.06□□□□□ -0.32
LINC01647-201ENST00000453135 HFM1A2PYH4 1435 aa13.05□□□□□ -0.32
LINC01647-201ENST00000453135 NAIPQ13075 1403 aa13.05□□□□□ -0.32
LINC01647-201ENST00000453135 MADDQ8WXG6 1647 aa13.04□□□□□ -0.32
LINC01647-201ENST00000453135 TRIM26Q12899 539 aaPredicted RBP13.04□□□□□ -0.32
LINC01647-201ENST00000453135 KANK1Q14678 1352 aa13.04□□□□□ -0.32
LINC01647-201ENST00000453135 CNTLNQ9NXG0 1405 aa13.04□□□□□ -0.32
LINC01647-201ENST00000453135 RNF17Q9BXT8 1623 aaKnown RBP13.02□□□□□ -0.32
LINC01647-201ENST00000453135 PTPRMP28827 1452 aa13.02□□□□□ -0.33
LINC01647-201ENST00000453135 FER1L4A9Z1Z3 1794 aa13.02□□□□□ -0.33
LINC01647-201ENST00000453135 ZMYM3Q14202 1370 aa13.01□□□□□ -0.33
LINC01647-201ENST00000453135 RIMS1Q86UR5 1692 aaKnown RBP13□□□□□ -0.33
LINC01647-201ENST00000453135 FAM135AQ9P2D6 1515 aa13□□□□□ -0.33
LINC01647-201ENST00000453135 SETD5Q9C0A6 1442 aa13□□□□□ -0.33
LINC01647-201ENST00000453135 CEBPAP49715 358 aaPredicted RBP13□□□□□ -0.33
LINC01647-201ENST00000453135 MROH1Q8NDA8 1641 aa12.99□□□□□ -0.33
LINC01647-201ENST00000453135 PRDM15P57071 1507 aaPredicted RBP12.99□□□□□ -0.33
LINC01647-201ENST00000453135 KDM5DQ9BY66 1539 aa12.99□□□□□ -0.33
LINC01647-201ENST00000453135 NUP155O75694 1391 aa12.99□□□□□ -0.33
LINC01647-201ENST00000453135 GCC2Q8IWJ2 1684 aa12.99□□□□□ -0.33
LINC01647-201ENST00000453135 MKRN4PQ13434 485 aaPredicted RBP12.98□□□□□ -0.33
LINC01647-201ENST00000453135 TRIM52Q96A61 297 aa12.98□□□□□ -0.33
LINC01647-201ENST00000453135 DEPDC5O75140 1603 aa12.98□□□□□ -0.33
LINC01647-201ENST00000453135 ABCC3O15438 1527 aa12.98□□□□□ -0.33
LINC01647-201ENST00000453135 CLTCQ00610 1675 aaKnown RBP12.97□□□□□ -0.33
LINC01647-201ENST00000453135 ACIN1Q9UKV3 1341 aaKnown RBP12.96□□□□□ -0.33
LINC01647-201ENST00000453135 UNC13BO14795 1591 aa12.95□□□□□ -0.34
LINC01647-201ENST00000453135 VWDEQ8N2E2 1590 aa12.95□□□□□ -0.34
LINC01647-201ENST00000453135 LMTK2Q8IWU2 1503 aa12.95□□□□□ -0.34
LINC01647-201ENST00000453135 MROH2AA6NES4 1674 aa12.95□□□□□ -0.34
LINC01647-201ENST00000453135 RAB3GAP2Q9H2M9 1393 aa12.94□□□□□ -0.34
LINC01647-201ENST00000453135 ZC3H13Q5T200 1668 aaKnown RBP12.94□□□□□ -0.34
LINC01647-201ENST00000453135 HRCP23327 699 aa12.94□□□□□ -0.34
LINC01647-201ENST00000453135 FBXO31Q5XUX0 539 aaPredicted RBP12.94□□□□□ -0.34
LINC01647-201ENST00000453135 PZPP20742 1482 aa12.93□□□□□ -0.34
LINC01647-201ENST00000453135 ARHGAP31Q2M1Z3 1444 aa12.93□□□□□ -0.34
LINC01647-201ENST00000453135 C3P01024 1663 aa12.93□□□□□ -0.34
LINC01647-201ENST00000453135 CEP152O94986 1710 aa12.92□□□□□ -0.34
LINC01647-201ENST00000453135 NPATQ14207 1427 aa12.91□□□□□ -0.34
LINC01647-201ENST00000453135 IQGAP3Q86VI3 1631 aa12.91□□□□□ -0.34
LINC01647-201ENST00000453135 CAMSAP1Q5T5Y3 1602 aa12.9□□□□□ -0.34
LINC01647-201ENST00000453135 EFCAB6Q5THR3 1501 aa12.89□□□□□ -0.35
LINC01647-201ENST00000453135 TNRQ92752 1358 aa12.89□□□□□ -0.35
LINC01647-201ENST00000453135 PKD2Q13563 968 aa12.88□□□□□ -0.35
LINC01647-201ENST00000453135 MPHOSPH9Q99550 1183 aa12.88□□□□□ -0.35
LINC01647-201ENST00000453135 ERVK-7P63135 1459 aa12.88□□□□□ -0.35
LINC01647-201ENST00000453135 RPRD2Q5VT52 1461 aaKnown RBP12.88□□□□□ -0.35
LINC01647-201ENST00000453135 TET3O43151 1660 aa12.88□□□□□ -0.35
LINC01647-201ENST00000453135 SETD1BQ9UPS6 1966 aaKnown RBP12.88□□□□□ -0.35
LINC01647-201ENST00000453135 PCGF6Q9BYE7 350 aa12.87□□□□□ -0.35
LINC01647-201ENST00000453135 UHRF1BP1Q6BDS2 1440 aa12.86□□□□□ -0.35
LINC01647-201ENST00000453135 SPATA31D1Q6ZQQ2 1576 aa12.86□□□□□ -0.35
LINC01647-201ENST00000453135 CFAP65Q6ZU64 1925 aaKnown RBP12.85□□□□□ -0.35
LINC01647-201ENST00000453135 NOS1P29475 1434 aa12.85□□□□□ -0.35
LINC01647-201ENST00000453135 SLC52A1Q9NWF4 448 aa12.84□□□□□ -0.35
LINC01647-201ENST00000453135 ZBTB12Q9Y330 459 aaPredicted RBP12.84□□□□□ -0.35
LINC01647-201ENST00000453135 E9PCH4 1651 aa12.83□□□□□ -0.35
LINC01647-201ENST00000453135 PREX1Q8TCU6 1659 aa12.83□□□□□ -0.35
LINC01647-201ENST00000453135 IDI1Q13907 227 aa12.82□□□□□ -0.36
LINC01647-201ENST00000453135 NLRP1Q9C000 1473 aa12.82□□□□□ -0.36
LINC01647-201ENST00000453135 PTPRTO14522 1441 aa12.81□□□□□ -0.36
LINC01647-201ENST00000453135 A2ML1A8K2U0 1454 aa12.81□□□□□ -0.36
LINC01647-201ENST00000453135 LMTK3Q96Q04 1460 aa12.81□□□□□ -0.36
LINC01647-201ENST00000453135 STAG3Q9UJ98 1225 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms