RNA–Protein interactions for RNA: ENST00000452666.3

VPS8-212, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 578 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-212ENST00000452666 MAP3K9P80192 1104 aa10.38□□□□□ -0.75
VPS8-212ENST00000452666 RYDENQ9NUL5 291 aaKnown RBP10.38□□□□□ -0.75
VPS8-212ENST00000452666 KIAA1468Q9P260 1216 aa10.37□□□□□ -0.75
VPS8-212ENST00000452666 PCDHGA10Q9Y5H3 936 aa10.36□□□□□ -0.75
VPS8-212ENST00000452666 ONECUT3O60422 494 aaPredicted RBP10.35□□□□□ -0.75
VPS8-212ENST00000452666 FBXW7Q969H0 707 aa10.35□□□□□ -0.75
VPS8-212ENST00000452666 NCKAP5LQ9HCH0 1330 aa10.34□□□□□ -0.75
VPS8-212ENST00000452666 NRG2O14511 850 aaPredicted RBP10.34□□□□□ -0.75
VPS8-212ENST00000452666 TSR3Q9UJK0 312 aaKnown RBP10.34□□□□□ -0.75
VPS8-212ENST00000452666 TYW1BQ6NUM6 668 aa10.33□□□□□ -0.76
VPS8-212ENST00000452666 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.32□□□□□ -0.76
VPS8-212ENST00000452666 SEPT9Q9UHD8 586 aaPredicted RBP10.32□□□□□ -0.76
VPS8-212ENST00000452666 FAM98CQ17RN3 349 aaKnown RBP10.31□□□□□ -0.76
VPS8-212ENST00000452666 LRCH3Q96II8 777 aa10.31□□□□□ -0.76
VPS8-212ENST00000452666 HPS5Q9UPZ3 1129 aa10.31□□□□□ -0.76
VPS8-212ENST00000452666 PHF14O94880 888 aa10.3□□□□□ -0.76
VPS8-212ENST00000452666 CHGAP10645 457 aaKnown RBP10.3□□□□□ -0.76
VPS8-212ENST00000452666 DDX27Q96GQ7 796 aaKnown RBP10.3□□□□□ -0.76
VPS8-212ENST00000452666 PRKD2Q9BZL6 878 aa10.3□□□□□ -0.76
VPS8-212ENST00000452666 ZNF787Q6DD87 383 aa10.28□□□□□ -0.76
VPS8-212ENST00000452666 LARP6Q9BRS8 491 aaKnown RBP10.28□□□□□ -0.76
VPS8-212ENST00000452666 NKX1-1Q15270 411 aaPredicted RBP10.27□□□□□ -0.77
VPS8-212ENST00000452666 DNAJC5Q9H3Z4 198 aa10.27□□□□□ -0.77
VPS8-212ENST00000452666 TRIM6-TRIM34B2RNG4 842 aa10.26□□□□□ -0.77
VPS8-212ENST00000452666 V9GY48 417 aaPredicted RBP10.25□□□□□ -0.77
VPS8-212ENST00000452666 C6orf132Q5T0Z8 1188 aa10.24□□□□□ -0.77
VPS8-212ENST00000452666 EMILIN3Q9NT22 766 aa10.23□□□□□ -0.77
VPS8-212ENST00000452666 PPP4CP60510 307 aa10.22□□□□□ -0.77
VPS8-212ENST00000452666 MFSD10Q14728 455 aa10.22□□□□□ -0.77
VPS8-212ENST00000452666 EPAS1Q99814 870 aa10.22□□□□□ -0.77
VPS8-212ENST00000452666 TJAP1Q5JTD0 557 aa10.21□□□□□ -0.77
VPS8-212ENST00000452666 PPP1R18Q6NYC8 613 aa10.19□□□□□ -0.78
VPS8-212ENST00000452666 ZNF775Q96BV0 537 aaPredicted RBP10.19□□□□□ -0.78
VPS8-212ENST00000452666 PDZRN3Q9UPQ7 1066 aa10.19□□□□□ -0.78
VPS8-212ENST00000452666 IL21Q9HBE4 155 aa10.17□□□□□ -0.78
VPS8-212ENST00000452666 PACS2Q86VP3 889 aa10.16□□□□□ -0.78
VPS8-212ENST00000452666 MTRQ99707 1265 aa10.15□□□□□ -0.78
VPS8-212ENST00000452666 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.14□□□□□ -0.79
VPS8-212ENST00000452666 RBM33Q96EV2 1170 aaKnown RBP10.13□□□□□ -0.79
VPS8-212ENST00000452666 SAMD7Q7Z3H4 446 aa10.1□□□□□ -0.79
VPS8-212ENST00000452666 TSKSQ9UJT2 592 aa10.1□□□□□ -0.79
VPS8-212ENST00000452666 GGCXP38435 758 aa10.08□□□□□ -0.8
VPS8-212ENST00000452666 GTPBP6O43824 516 aaPredicted RBP10.06□□□□□ -0.8
VPS8-212ENST00000452666 ZNF516Q92618 1163 aa10.06□□□□□ -0.8
VPS8-212ENST00000452666 DPYSL4O14531 572 aa10.04□□□□□ -0.8
VPS8-212ENST00000452666 DDX12PQ92771 950 aa10.04□□□□□ -0.8
VPS8-212ENST00000452666 MAP3K7O43318 606 aa10.03□□□□□ -0.8
VPS8-212ENST00000452666 EN1Q05925 392 aaPredicted RBP10.03□□□□□ -0.8
VPS8-212ENST00000452666 SMAPO00193 183 aa10.02□□□□□ -0.81
VPS8-212ENST00000452666 CAMK2BQ13554 666 aa10.01□□□□□ -0.81
VPS8-212ENST00000452666 NBR1Q14596 966 aa10.01□□□□□ -0.81
VPS8-212ENST00000452666 TSR1Q2NL82 804 aaKnown RBP10.01□□□□□ -0.81
VPS8-212ENST00000452666 PKDCCQ504Y2 493 aa10.01□□□□□ -0.81
VPS8-212ENST00000452666 CDCA7LQ96GN5 454 aa10.01□□□□□ -0.81
VPS8-212ENST00000452666 TMUB1Q9BVT8 246 aa10.01□□□□□ -0.81
VPS8-212ENST00000452666 RNF40O75150 1001 aa10□□□□□ -0.81
VPS8-212ENST00000452666 NKX2-3Q8TAU0 364 aa10□□□□□ -0.81
VPS8-212ENST00000452666 NBPF26B4DH59 902 aa9.99□□□□□ -0.81
VPS8-212ENST00000452666 APLP1P51693 650 aa9.99□□□□□ -0.81
VPS8-212ENST00000452666 HDGFP51858 240 aaKnown RBP9.99□□□□□ -0.81
VPS8-212ENST00000452666 PRSS12P56730 875 aa9.98□□□□□ -0.81
VPS8-212ENST00000452666 NECTIN2Q92692 538 aa9.98□□□□□ -0.81
VPS8-212ENST00000452666 DGAT1O75907 488 aa9.97□□□□□ -0.81
VPS8-212ENST00000452666 MYT1Q01538 1121 aa9.97□□□□□ -0.81
VPS8-212ENST00000452666 CERKQ8TCT0 537 aa9.97□□□□□ -0.81
VPS8-212ENST00000452666 TATDN2Q93075 761 aa9.97□□□□□ -0.81
VPS8-212ENST00000452666 PNMA3Q9UL41 463 aa9.96□□□□□ -0.82
VPS8-212ENST00000452666 TRIM67Q6ZTA4 783 aa9.95□□□□□ -0.82
VPS8-212ENST00000452666 COPS2P61201 443 aa9.94□□□□□ -0.82
VPS8-212ENST00000452666 CADPS2Q86UW7 1296 aa9.94□□□□□ -0.82
VPS8-212ENST00000452666 FAM198AQ9UFP1 575 aa9.94□□□□□ -0.82
VPS8-212ENST00000452666 POTECB2RU33 542 aa9.93□□□□□ -0.82
VPS8-212ENST00000452666 SLC19A1P41440 591 aa9.92□□□□□ -0.82
VPS8-212ENST00000452666 C3orf80F5H4A9 247 aa9.91□□□□□ -0.82
VPS8-212ENST00000452666 TREML4Q6UXN2 200 aa9.91□□□□□ -0.82
VPS8-212ENST00000452666 ZPR1O75312 459 aa9.9□□□□□ -0.82
VPS8-212ENST00000452666 PRR20EP86478 221 aa9.9□□□□□ -0.82
VPS8-212ENST00000452666 PRR20CP86479 221 aa9.9□□□□□ -0.82
VPS8-212ENST00000452666 PRR20DP86480 221 aa9.9□□□□□ -0.82
VPS8-212ENST00000452666 PRR20BP86481 221 aa9.9□□□□□ -0.82
VPS8-212ENST00000452666 PRR20AP86496 221 aa9.9□□□□□ -0.82
VPS8-212ENST00000452666 NUDT18Q6ZVK8 323 aa9.89□□□□□ -0.83
VPS8-212ENST00000452666 PDIA6Q15084 440 aa9.88□□□□□ -0.83
VPS8-212ENST00000452666 ZNF598Q86UK7 904 aaKnown RBP9.88□□□□□ -0.83
VPS8-212ENST00000452666 SLF2Q8IX21 1173 aa9.88□□□□□ -0.83
VPS8-212ENST00000452666 RNF223E7ERA6 249 aa9.87□□□□□ -0.83
VPS8-212ENST00000452666 SPRYD7Q5W111 196 aa9.87□□□□□ -0.83
VPS8-212ENST00000452666 FAM187AA6NFU0 413 aa9.86□□□□□ -0.83
VPS8-212ENST00000452666 SLC4A3P48751 1232 aa9.86□□□□□ -0.83
VPS8-212ENST00000452666 LCE2AQ5TA79 106 aaPredicted RBP9.86□□□□□ -0.83
VPS8-212ENST00000452666 RBM27Q9P2N5 1060 aaKnown RBP9.86□□□□□ -0.83
VPS8-212ENST00000452666 SPDYE16A6NNV3 312 aaPredicted RBP9.85□□□□□ -0.83
VPS8-212ENST00000452666 PRR14Q9BWN1 585 aa9.85□□□□□ -0.83
VPS8-212ENST00000452666 EMID1Q96A84 441 aaPredicted RBP9.84□□□□□ -0.83
VPS8-212ENST00000452666 SWT1Q5T5J6 900 aaKnown RBP9.83□□□□□ -0.84
VPS8-212ENST00000452666 ZNF697Q5TEC3 545 aa9.82□□□□□ -0.84
VPS8-212ENST00000452666 ANKLE1Q8NAG6 615 aa9.82□□□□□ -0.84
VPS8-212ENST00000452666 PCDHB3Q9Y5E6 796 aa9.82□□□□□ -0.84
VPS8-212ENST00000452666 AAASQ9NRG9 546 aa9.8□□□□□ -0.84
VPS8-212ENST00000452666 TNFRSF10AO00220 468 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms