RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 GGT6Q6P531 493 aa17.43■□□□□ 0.38
USP1-204ENST00000452143 TCOF1Q13428 1488 aaKnown RBP17.42■□□□□ 0.38
USP1-204ENST00000452143 VPS8Q8N3P4 1428 aa17.41■□□□□ 0.38
USP1-204ENST00000452143 RSPH4AQ5TD94 716 aa17.41■□□□□ 0.38
USP1-204ENST00000452143 A2ML1A8K2U0 1454 aa17.39■□□□□ 0.37
USP1-204ENST00000452143 DNMT1P26358 1616 aaKnown RBP17.39■□□□□ 0.37
USP1-204ENST00000452143 POLR1AO95602 1720 aaPredicted RBP17.38■□□□□ 0.37
USP1-204ENST00000452143 LRRC9Q6ZRR7 1453 aa17.38■□□□□ 0.37
USP1-204ENST00000452143 PZPP20742 1482 aa17.37■□□□□ 0.37
USP1-204ENST00000452143 MAP3K1Q13233 1512 aa17.37■□□□□ 0.37
USP1-204ENST00000452143 MAST1Q9Y2H9 1570 aa17.37■□□□□ 0.37
USP1-204ENST00000452143 PKD2Q13563 968 aa17.37■□□□□ 0.37
USP1-204ENST00000452143 ZC3H13Q5T200 1668 aaKnown RBP17.36■□□□□ 0.37
USP1-204ENST00000452143 RNF17Q9BXT8 1623 aaKnown RBP17.36■□□□□ 0.37
USP1-204ENST00000452143 EIF2AK4Q9P2K8 1649 aaKnown RBP17.35■□□□□ 0.37
USP1-204ENST00000452143 NCKAP5LQ9HCH0 1330 aa17.33■□□□□ 0.36
USP1-204ENST00000452143 KIF3BO15066 747 aa17.33■□□□□ 0.36
USP1-204ENST00000452143 TNRQ92752 1358 aa17.32■□□□□ 0.36
USP1-204ENST00000452143 NEURL4Q96JN8 1562 aa17.31■□□□□ 0.36
USP1-204ENST00000452143 NLRP1Q9C000 1473 aa17.31■□□□□ 0.36
USP1-204ENST00000452143 MIA2Q96PC5 1412 aa17.3■□□□□ 0.36
USP1-204ENST00000452143 ZNF335Q9H4Z2 1342 aaPredicted RBP17.3■□□□□ 0.36
USP1-204ENST00000452143 TSPY4P0CV99 314 aa17.3■□□□□ 0.36
USP1-204ENST00000452143 TSPY10P0CW01 314 aa17.3■□□□□ 0.36
USP1-204ENST00000452143 WASHC2CQ9Y4E1 1318 aa17.29■□□□□ 0.36
USP1-204ENST00000452143 MAPK8IP2Q13387 824 aaPredicted RBP17.29■□□□□ 0.36
USP1-204ENST00000452143 MYOM3Q5VTT5 1437 aa17.29■□□□□ 0.36
USP1-204ENST00000452143 SPATA31D1Q6ZQQ2 1576 aa17.28■□□□□ 0.36
USP1-204ENST00000452143 ABCC3O15438 1527 aa17.27■□□□□ 0.36
USP1-204ENST00000452143 CROCC2H7BZ55 1655 aa17.27■□□□□ 0.36
USP1-204ENST00000452143 DEPDC5O75140 1603 aa17.27■□□□□ 0.36
USP1-204ENST00000452143 MROH1Q8NDA8 1641 aa17.26■□□□□ 0.35
USP1-204ENST00000452143 UGGT1Q9NYU2 1555 aa17.26■□□□□ 0.35
USP1-204ENST00000452143 CPS1P31327 1500 aa17.26■□□□□ 0.35
USP1-204ENST00000452143 FBXO31Q5XUX0 539 aaPredicted RBP17.25■□□□□ 0.35
USP1-204ENST00000452143 DISP3Q9P2K9 1392 aa17.25■□□□□ 0.35
USP1-204ENST00000452143 DUOX2Q9NRD8 1548 aa17.24■□□□□ 0.35
USP1-204ENST00000452143 SHANK2Q9UPX8 1470 aa17.24■□□□□ 0.35
USP1-204ENST00000452143 CEP152O94986 1710 aa17.23■□□□□ 0.35
USP1-204ENST00000452143 MED14O60244 1454 aa17.22■□□□□ 0.35
USP1-204ENST00000452143 PRDM15P57071 1507 aaPredicted RBP17.21■□□□□ 0.35
USP1-204ENST00000452143 IQGAP1P46940 1657 aa17.21■□□□□ 0.35
USP1-204ENST00000452143 KANK4Q5T7N3 995 aaPredicted RBP17.21■□□□□ 0.35
USP1-204ENST00000452143 ERVK-7P63135 1459 aa17.2■□□□□ 0.34
USP1-204ENST00000452143 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.2■□□□□ 0.34
USP1-204ENST00000452143 LOC105371045A0A1W2PR82 267 aa17.2■□□□□ 0.34
USP1-204ENST00000452143 THEMISQ8N1K5 641 aaPredicted RBP17.2■□□□□ 0.34
USP1-204ENST00000452143 VWDEQ8N2E2 1590 aa17.19■□□□□ 0.34
USP1-204ENST00000452143 PTPN23Q9H3S7 1636 aa17.19■□□□□ 0.34
USP1-204ENST00000452143 UBAP1LF5GYI3 381 aa17.19■□□□□ 0.34
USP1-204ENST00000452143 ERBINQ96RT1 1412 aa17.19■□□□□ 0.34
USP1-204ENST00000452143 ANKLE2Q86XL3 938 aa17.18■□□□□ 0.34
USP1-204ENST00000452143 NPHP4O75161 1426 aaPredicted RBP17.17■□□□□ 0.34
USP1-204ENST00000452143 CACNB1Q02641 598 aaPredicted RBP17.17■□□□□ 0.34
USP1-204ENST00000452143 UBR1Q8IWV7 1749 aa17.17■□□□□ 0.34
USP1-204ENST00000452143 KIF15Q9NS87 1388 aa17.15■□□□□ 0.34
USP1-204ENST00000452143 SYNMO15061 1565 aa17.15■□□□□ 0.34
USP1-204ENST00000452143 ARHGAP31Q2M1Z3 1444 aa17.14■□□□□ 0.33
USP1-204ENST00000452143 SCAF1Q9H7N4 1312 aaKnown RBP17.14■□□□□ 0.33
USP1-204ENST00000452143 CFAP65Q6ZU64 1925 aaKnown RBP17.13■□□□□ 0.33
USP1-204ENST00000452143 ABCC5O15440 1437 aa17.13■□□□□ 0.33
USP1-204ENST00000452143 DAPK1P53355 1430 aa17.13■□□□□ 0.33
USP1-204ENST00000452143 FGD6Q6ZV73 1430 aa17.12■□□□□ 0.33
USP1-204ENST00000452143 APLP2Q06481 763 aa17.11■□□□□ 0.33
USP1-204ENST00000452143 ILDR2Q71H61 639 aa17.11■□□□□ 0.33
USP1-204ENST00000452143 KDM5AP29375 1690 aaKnown RBP17.1■□□□□ 0.33
USP1-204ENST00000452143 SLIT1O75093 1534 aa17.1■□□□□ 0.33
USP1-204ENST00000452143 STRCP1A6NGW2 1772 aa17.1■□□□□ 0.33
USP1-204ENST00000452143 TOM1O60784 492 aa17.09■□□□□ 0.33
USP1-204ENST00000452143 SCAF11Q99590 1463 aaKnown RBP17.09■□□□□ 0.33
USP1-204ENST00000452143 LMTK2Q8IWU2 1503 aa17.08■□□□□ 0.32
USP1-204ENST00000452143 ARHGAP23Q9P227 1491 aa17.08■□□□□ 0.32
USP1-204ENST00000452143 SOCS7O14512 581 aa17.08■□□□□ 0.32
USP1-204ENST00000452143 PIK3C2BO00750 1634 aa17.07■□□□□ 0.32
USP1-204ENST00000452143 ALKQ9UM73 1620 aa17.07■□□□□ 0.32
USP1-204ENST00000452143 KANK1Q14678 1352 aa17.06■□□□□ 0.32
USP1-204ENST00000452143 ANKRD30AQ9BXX3 1397 aa17.05■□□□□ 0.32
USP1-204ENST00000452143 LRRC7Q96NW7 1537 aa17.05■□□□□ 0.32
USP1-204ENST00000452143 RRP7BPQ9NSQ0 103 aa17.04■□□□□ 0.32
USP1-204ENST00000452143 ADGRL2O95490 1459 aa17.04■□□□□ 0.32
USP1-204ENST00000452143 EFCAB6Q5THR3 1501 aa17.03■□□□□ 0.32
USP1-204ENST00000452143 MED1Q15648 1581 aaPredicted RBP17.02■□□□□ 0.32
USP1-204ENST00000452143 PIP4K2BP78356 416 aa17.02■□□□□ 0.32
USP1-204ENST00000452143 HSPA1LP34931 641 aa17■□□□□ 0.31
USP1-204ENST00000452143 XIRP1Q702N8 1843 aaKnown RBP16.99■□□□□ 0.31
USP1-204ENST00000452143 TMEM2Q9UHN6 1383 aa16.99■□□□□ 0.31
USP1-204ENST00000452143 ADGRB3O60242 1522 aa16.98■□□□□ 0.31
USP1-204ENST00000452143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.98■□□□□ 0.316e-8■□□□□ 9.8
USP1-204ENST00000452143 EID1Q9Y6B2 187 aa16.98■□□□□ 0.31
USP1-204ENST00000452143 LTKP29376 864 aa16.97■□□□□ 0.31
USP1-204ENST00000452143 RPRD2Q5VT52 1461 aaKnown RBP16.97■□□□□ 0.31
USP1-204ENST00000452143 NOS1P29475 1434 aa16.96■□□□□ 0.31
USP1-204ENST00000452143 TXNDC2Q86VQ3 553 aa16.96■□□□□ 0.31
USP1-204ENST00000452143 TET3O43151 1660 aa16.94■□□□□ 0.3
USP1-204ENST00000452143 CHIC2Q9UKJ5 165 aa16.94■□□□□ 0.3
USP1-204ENST00000452143 GCC2Q8IWJ2 1684 aa16.94■□□□□ 0.3
USP1-204ENST00000452143 STAG3Q9UJ98 1225 aa16.93■□□□□ 0.3
USP1-204ENST00000452143 ANKRD50Q9ULJ7 1429 aa16.93■□□□□ 0.3
USP1-204ENST00000452143 UNC13BO14795 1591 aa16.93■□□□□ 0.3
USP1-204ENST00000452143 NWD1Q149M9 1564 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms