RNA–Protein interactions for RNA: ENST00000450179.1

TMEM254-206, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-206ENST00000450179 MAMSTRQ6ZN01 415 aa9.91□□□□□ -0.82
TMEM254-206ENST00000450179 NUP153P49790 1475 aaKnown RBP9.91□□□□□ -0.82
TMEM254-206ENST00000450179 TRIM26Q12899 539 aaPredicted RBP9.89□□□□□ -0.83
TMEM254-206ENST00000450179 FAM163AQ96GL9 167 aaPredicted RBP9.89□□□□□ -0.83
TMEM254-206ENST00000450179 COL17A1Q9UMD9 1497 aaPredicted RBP9.89□□□□□ -0.83
TMEM254-206ENST00000450179 BRPF1P55201 1214 aaPredicted RBP9.88□□□□□ -0.83
TMEM254-206ENST00000450179 SCUBE2Q9NQ36 999 aa9.88□□□□□ -0.83
TMEM254-206ENST00000450179 MAGI3Q5TCQ9 1506 aa9.87□□□□□ -0.83
TMEM254-206ENST00000450179 TEX14Q8IWB6 1497 aa9.87□□□□□ -0.83
TMEM254-206ENST00000450179 ARHGAP35Q9NRY4 1499 aa9.87□□□□□ -0.83
TMEM254-206ENST00000450179 ABCA9Q8IUA7 1624 aa9.87□□□□□ -0.83
TMEM254-206ENST00000450179 PLEKHG5O94827 1062 aa9.87□□□□□ -0.83
TMEM254-206ENST00000450179 UBTFP17480 764 aaKnown RBP9.87□□□□□ -0.83
TMEM254-206ENST00000450179 CD109Q6YHK3 1445 aa9.85□□□□□ -0.83
TMEM254-206ENST00000450179 ARID3CA6NKF2 412 aa9.85□□□□□ -0.83
TMEM254-206ENST00000450179 TIE1P35590 1138 aa9.85□□□□□ -0.83
TMEM254-206ENST00000450179 COLQQ9Y215 455 aaPredicted RBP9.85□□□□□ -0.83
TMEM254-206ENST00000450179 TTLL13PA6NNM8 815 aa9.84□□□□□ -0.83
TMEM254-206ENST00000450179 KCNH8Q96L42 1107 aa9.84□□□□□ -0.83
TMEM254-206ENST00000450179 PLCD3Q8N3E9 789 aa9.83□□□□□ -0.84
TMEM254-206ENST00000450179 LRRIQ1Q96JM4 1722 aa9.82□□□□□ -0.84
TMEM254-206ENST00000450179 CDK13Q14004 1512 aaKnown RBP9.82□□□□□ -0.84
TMEM254-206ENST00000450179 SEC24BO95487 1268 aa9.81□□□□□ -0.84
TMEM254-206ENST00000450179 HECW1Q76N89 1606 aa9.81□□□□□ -0.84
TMEM254-206ENST00000450179 FMN1Q68DA7 1419 aa9.81□□□□□ -0.84
TMEM254-206ENST00000450179 ARAP3Q8WWN8 1544 aa9.8□□□□□ -0.84
TMEM254-206ENST00000450179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.79□□□□□ -0.84
TMEM254-206ENST00000450179 LMOD2Q6P5Q4 547 aa9.79□□□□□ -0.84
TMEM254-206ENST00000450179 TRIM35Q9UPQ4 493 aa9.79□□□□□ -0.84
TMEM254-206ENST00000450179 PCDHB13Q9Y5F0 798 aa9.79□□□□□ -0.84
TMEM254-206ENST00000450179 TTC37Q6PGP7 1564 aa9.79□□□□□ -0.84
TMEM254-206ENST00000450179 HRCP23327 699 aa9.78□□□□□ -0.84
TMEM254-206ENST00000450179 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.78□□□□□ -0.84
TMEM254-206ENST00000450179 KDM4FA0A1W2PPD8 638 aa9.77□□□□□ -0.85
TMEM254-206ENST00000450179 PCDH10Q9P2E7 1040 aa9.77□□□□□ -0.85
TMEM254-206ENST00000450179 NEO1Q92859 1461 aa9.77□□□□□ -0.85
TMEM254-206ENST00000450179 PCF11O94913 1555 aaKnown RBP9.76□□□□□ -0.85
TMEM254-206ENST00000450179 FRMPD1Q5SYB0 1578 aa9.76□□□□□ -0.85
TMEM254-206ENST00000450179 PLEKHD1A6NEE1 506 aa9.76□□□□□ -0.85
TMEM254-206ENST00000450179 GTPBP6O43824 516 aaPredicted RBP9.76□□□□□ -0.85
TMEM254-206ENST00000450179 NUBP1P53384 320 aa9.76□□□□□ -0.85
TMEM254-206ENST00000450179 PHLDB1Q86UU1 1377 aa9.75□□□□□ -0.85
TMEM254-206ENST00000450179 IFNL1Q8IU54 200 aa9.75□□□□□ -0.85
TMEM254-206ENST00000450179 KIF14Q15058 1648 aa9.74□□□□□ -0.85
TMEM254-206ENST00000450179 CASKIN1Q8WXD9 1431 aa9.74□□□□□ -0.85
TMEM254-206ENST00000450179 CIZ1Q9ULV3 898 aaPredicted RBP9.74□□□□□ -0.85
TMEM254-206ENST00000450179 RICTORQ6R327 1708 aa9.73□□□□□ -0.85
TMEM254-206ENST00000450179 ADGRL1O94910 1474 aa9.73□□□□□ -0.85
TMEM254-206ENST00000450179 CFAP74Q9C0B2 1584 aa9.73□□□□□ -0.85
TMEM254-206ENST00000450179 NKX1-1Q15270 411 aaPredicted RBP9.73□□□□□ -0.85
TMEM254-206ENST00000450179 CLIP1P30622 1438 aa9.73□□□□□ -0.85
TMEM254-206ENST00000450179 NEUROD2Q15784 382 aa9.72□□□□□ -0.85
TMEM254-206ENST00000450179 MYO5CQ9NQX4 1742 aa9.72□□□□□ -0.85
TMEM254-206ENST00000450179 TROQ12816 1431 aaPredicted RBP9.72□□□□□ -0.85
TMEM254-206ENST00000450179 FANCAO15360 1455 aa9.72□□□□□ -0.85
TMEM254-206ENST00000450179 FYCO1Q9BQS8 1478 aa9.72□□□□□ -0.85
TMEM254-206ENST00000450179 CCDC18Q5T9S5 1454 aa9.71□□□□□ -0.86
TMEM254-206ENST00000450179 RAPGEF3O95398 923 aa9.7□□□□□ -0.86
TMEM254-206ENST00000450179 SGIP1Q9BQI5 828 aa9.7□□□□□ -0.86
TMEM254-206ENST00000450179 TMEM106CQ9BVX2 250 aa9.7□□□□□ -0.86
TMEM254-206ENST00000450179 ZMYND15Q9H091 742 aa9.7□□□□□ -0.86
TMEM254-206ENST00000450179 RSPH6AQ9H0K4 717 aa9.7□□□□□ -0.86
TMEM254-206ENST00000450179 PLCH2O75038 1416 aa9.7□□□□□ -0.86
TMEM254-206ENST00000450179 AKNAQ7Z591 1439 aa9.7□□□□□ -0.86
TMEM254-206ENST00000450179 IER5LQ5T953 404 aa9.69□□□□□ -0.86
TMEM254-206ENST00000450179 ZMYM4Q5VZL5 1548 aa9.69□□□□□ -0.86
TMEM254-206ENST00000450179 ATP1B4Q9UN42 357 aaPredicted RBP9.69□□□□□ -0.86
TMEM254-206ENST00000450179 CDC42BPBQ9Y5S2 1711 aa9.68□□□□□ -0.86
TMEM254-206ENST00000450179 DENND4BO75064 1496 aaPredicted RBP9.68□□□□□ -0.86
TMEM254-206ENST00000450179 FAM212AQ96EL1 285 aa9.68□□□□□ -0.86
TMEM254-206ENST00000450179 ZBTB47Q9UFB7 747 aaPredicted RBP9.68□□□□□ -0.86
TMEM254-206ENST00000450179 ARHGEF40Q8TER5 1519 aa9.67□□□□□ -0.86
TMEM254-206ENST00000450179 SLAIN1Q8ND83 568 aa9.67□□□□□ -0.86
TMEM254-206ENST00000450179 CDK11AQ9UQ88 783 aaPredicted RBP9.67□□□□□ -0.86
TMEM254-206ENST00000450179 PREX2Q70Z35 1606 aa9.67□□□□□ -0.86
TMEM254-206ENST00000450179 CEP162Q5TB80 1403 aa9.66□□□□□ -0.86
TMEM254-206ENST00000450179 CDC42BPAQ5VT25 1732 aa9.66□□□□□ -0.86
TMEM254-206ENST00000450179 SIGLEC1Q9BZZ2 1709 aa9.66□□□□□ -0.86
TMEM254-206ENST00000450179 POGZQ7Z3K3 1410 aa9.65□□□□□ -0.86
TMEM254-206ENST00000450179 ADAMTSL3P82987 1691 aa9.65□□□□□ -0.86
TMEM254-206ENST00000450179 CDAN1Q8IWY9 1227 aa9.65□□□□□ -0.86
TMEM254-206ENST00000450179 RYDENQ9NUL5 291 aaKnown RBP9.65□□□□□ -0.86
TMEM254-206ENST00000450179 PLCG2P16885 1265 aa9.64□□□□□ -0.87
TMEM254-206ENST00000450179 BCORL1Q5H9F3 1711 aa9.64□□□□□ -0.87
TMEM254-206ENST00000450179 SCAPERQ9BY12 1400 aa9.64□□□□□ -0.87
TMEM254-206ENST00000450179 KDM5CP41229 1560 aa9.63□□□□□ -0.87
TMEM254-206ENST00000450179 ARHGAP5Q13017 1502 aa9.63□□□□□ -0.87
TMEM254-206ENST00000450179 CCDC9Q9Y3X0 531 aaKnown RBP9.63□□□□□ -0.87
TMEM254-206ENST00000450179 MAGI2Q86UL8 1455 aa9.63□□□□□ -0.87
TMEM254-206ENST00000450179 YEATS2Q9ULM3 1422 aa9.63□□□□□ -0.87
TMEM254-206ENST00000450179 ZFYVE16Q7Z3T8 1539 aa9.62□□□□□ -0.87
TMEM254-206ENST00000450179 ST18O60284 1047 aa9.62□□□□□ -0.87
TMEM254-206ENST00000450179 EFCAB2Q5VUJ9 269 aa9.62□□□□□ -0.87
TMEM254-206ENST00000450179 ABCC1P33527 1531 aa9.61□□□□□ -0.87
TMEM254-206ENST00000450179 ARHGEF12Q9NZN5 1544 aa9.61□□□□□ -0.87
TMEM254-206ENST00000450179 ITSN2Q9NZM3 1697 aa9.61□□□□□ -0.87
TMEM254-206ENST00000450179 PYGBP11216 843 aa9.61□□□□□ -0.87
TMEM254-206ENST00000450179 RNF25Q96BH1 459 aaPredicted RBP9.61□□□□□ -0.87
TMEM254-206ENST00000450179 MADDQ8WXG6 1647 aa9.6□□□□□ -0.87
TMEM254-206ENST00000450179 LOC105371045A0A1W2PR82 267 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms