RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 NAP1L5Q96NT1 182 aaPredicted RBP18.32■□□□□ 0.52
CHFR-205ENST00000450056 ARID4BQ4LE39 1312 aaPredicted RBP18.31■□□□□ 0.52
CHFR-205ENST00000450056 KIF15Q9NS87 1388 aa18.31■□□□□ 0.52
CHFR-205ENST00000450056 GZF1Q9H116 711 aaPredicted RBP18.31■□□□□ 0.52
CHFR-205ENST00000450056 NLRP13Q86W25 1043 aa18.3■□□□□ 0.52
CHFR-205ENST00000450056 RALBP1Q15311 655 aa18.29■□□□□ 0.52
CHFR-205ENST00000450056 CARMIL2Q6F5E8 1435 aa18.29■□□□□ 0.52
CHFR-205ENST00000450056 POGKQ9P215 609 aa18.29■□□□□ 0.52
CHFR-205ENST00000450056 DENND4BO75064 1496 aaPredicted RBP18.29■□□□□ 0.52
CHFR-205ENST00000450056 FAM161AQ3B820 660 aa18.29■□□□□ 0.52
CHFR-205ENST00000450056 KDM6BO15054 1643 aa18.28■□□□□ 0.52
CHFR-205ENST00000450056 SHROOM2Q13796 1616 aa18.28■□□□□ 0.52
CHFR-205ENST00000450056 PLB1Q6P1J6 1458 aa18.28■□□□□ 0.52
CHFR-205ENST00000450056 RSPH6AQ9H0K4 717 aa18.27■□□□□ 0.52
CHFR-205ENST00000450056 ABCA8O94911 1581 aa18.27■□□□□ 0.52
CHFR-205ENST00000450056 TCOF1Q13428 1488 aaKnown RBP18.27■□□□□ 0.51
CHFR-205ENST00000450056 CANXP27824 592 aaKnown RBP18.25■□□□□ 0.51
CHFR-205ENST00000450056 PDE3BQ13370 1112 aa18.25■□□□□ 0.51
CHFR-205ENST00000450056 KTN1Q86UP2 1357 aaKnown RBP18.24■□□□□ 0.51
CHFR-205ENST00000450056 RPRD2Q5VT52 1461 aaKnown RBP18.24■□□□□ 0.51
CHFR-205ENST00000450056 SPATA31E1Q6ZUB1 1445 aa18.24■□□□□ 0.51
CHFR-205ENST00000450056 VSIG10Q8N0Z9 540 aa18.23■□□□□ 0.51
CHFR-205ENST00000450056 WDR43Q15061 677 aaKnown RBP eCLIP18.23■□□□□ 0.51
CHFR-205ENST00000450056 CFDP1Q9UEE9 299 aaPredicted RBP18.23■□□□□ 0.51
CHFR-205ENST00000450056 BRD4O60885 1362 aaPredicted RBP18.22■□□□□ 0.51
CHFR-205ENST00000450056 CENPQQ7L2Z9 268 aaPredicted RBP18.21■□□□□ 0.51
CHFR-205ENST00000450056 ADCY10Q96PN6 1610 aa18.21■□□□□ 0.5
CHFR-205ENST00000450056 PRG4Q92954 1404 aaPredicted RBP18.2■□□□□ 0.5
CHFR-205ENST00000450056 FAM43AQ8N2R8 423 aa18.2■□□□□ 0.5
CHFR-205ENST00000450056 MIA2Q96PC5 1412 aa18.2■□□□□ 0.5
CHFR-205ENST00000450056 CCDC146Q8IYE0 955 aa18.19■□□□□ 0.5
CHFR-205ENST00000450056 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.18■□□□□ 0.5
CHFR-205ENST00000450056 GLIPR1L2Q4G1C9 344 aa18.18■□□□□ 0.5
CHFR-205ENST00000450056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.18■□□□□ 0.54e-7■□□□□ 9.3
CHFR-205ENST00000450056 C8orf34Q49A92 452 aa18.17■□□□□ 0.5
CHFR-205ENST00000450056 ADAMTS8Q9UP79 889 aa18.17■□□□□ 0.5
CHFR-205ENST00000450056 ROCK2O75116 1388 aaKnown RBP18.17■□□□□ 0.5
CHFR-205ENST00000450056 PANK3Q9H999 370 aa18.17■□□□□ 0.5
CHFR-205ENST00000450056 CLASP1Q7Z460 1538 aa18.17■□□□□ 0.5
CHFR-205ENST00000450056 TROQ12816 1431 aaPredicted RBP18.16■□□□□ 0.5
CHFR-205ENST00000450056 PKNOX2Q96KN3 472 aa18.16■□□□□ 0.5
CHFR-205ENST00000450056 TEX14Q8IWB6 1497 aa18.16■□□□□ 0.5
CHFR-205ENST00000450056 RRAGDQ9NQL2 400 aaPredicted RBP18.15■□□□□ 0.5
CHFR-205ENST00000450056 BECN1Q14457 450 aa18.15■□□□□ 0.5
CHFR-205ENST00000450056 NUP155O75694 1391 aa18.14■□□□□ 0.49
CHFR-205ENST00000450056 KIF14Q15058 1648 aa18.14■□□□□ 0.49
CHFR-205ENST00000450056 PNNQ9H307 717 aaKnown RBP18.14■□□□□ 0.49
CHFR-205ENST00000450056 NBPF1Q3BBV0 1214 aa18.13■□□□□ 0.49
CHFR-205ENST00000450056 LRPPRCP42704 1394 aaKnown RBP18.13■□□□□ 0.49
CHFR-205ENST00000450056 ATP10BO94823 1461 aa18.13■□□□□ 0.49
CHFR-205ENST00000450056 ERCC6L2Q5T890 1561 aa18.13■□□□□ 0.49
CHFR-205ENST00000450056 NEUROD2Q15784 382 aa18.12■□□□□ 0.49
CHFR-205ENST00000450056 GCC2Q8IWJ2 1684 aa18.11■□□□□ 0.49
CHFR-205ENST00000450056 BCAR3O75815 825 aa18.1■□□□□ 0.49
CHFR-205ENST00000450056 SEC24BO95487 1268 aa18.1■□□□□ 0.49
CHFR-205ENST00000450056 UPF2Q9HAU5 1272 aaKnown RBP18.1■□□□□ 0.49
CHFR-205ENST00000450056 PTPRGP23470 1445 aa18.1■□□□□ 0.49
CHFR-205ENST00000450056 GOLGA2Q08379 1002 aa18.1■□□□□ 0.49
CHFR-205ENST00000450056 ITSN2Q9NZM3 1697 aa18.09■□□□□ 0.49
CHFR-205ENST00000450056 DAPK1P53355 1430 aa18.09■□□□□ 0.49
CHFR-205ENST00000450056 L1TD1Q5T7N2 865 aaKnown RBP18.08■□□□□ 0.49
CHFR-205ENST00000450056 DNMT1P26358 1616 aaKnown RBP18.07■□□□□ 0.48
CHFR-205ENST00000450056 BCORL1Q5H9F3 1711 aa18.07■□□□□ 0.48
CHFR-205ENST00000450056 HSP90AA2PQ14568 343 aaPredicted RBP18.07■□□□□ 0.48
CHFR-205ENST00000450056 COG6Q9Y2V7 657 aa18.07■□□□□ 0.48
CHFR-205ENST00000450056 GOLGA6L3A6NEY3 463 aa18.06■□□□□ 0.48
CHFR-205ENST00000450056 HSP90AA1P07900 732 aaKnown RBP18.06■□□□□ 0.48
CHFR-205ENST00000450056 GPATCH8Q9UKJ3 1502 aaKnown RBP18.06■□□□□ 0.48
CHFR-205ENST00000450056 ABCC5O15440 1437 aa18.06■□□□□ 0.48
CHFR-205ENST00000450056 PANK2Q9BZ23 570 aa18.06■□□□□ 0.48
CHFR-205ENST00000450056 KNSTRNQ9Y448 316 aa18.06■□□□□ 0.48
CHFR-205ENST00000450056 ABCC10Q5T3U5 1492 aa18.06■□□□□ 0.48
CHFR-205ENST00000450056 KDM2BQ8NHM5 1336 aa18.04■□□□□ 0.48
CHFR-205ENST00000450056 CDC42BPAQ5VT25 1732 aa18.04■□□□□ 0.48
CHFR-205ENST00000450056 TSPY4P0CV99 314 aa18.04■□□□□ 0.48
CHFR-205ENST00000450056 TSPY10P0CW01 314 aa18.04■□□□□ 0.48
CHFR-205ENST00000450056 IGHDP01880 384 aa18.03■□□□□ 0.48
CHFR-205ENST00000450056 PANK1Q8TE04 598 aa18.03■□□□□ 0.48
CHFR-205ENST00000450056 APAF1O14727 1248 aa18.03■□□□□ 0.48
CHFR-205ENST00000450056 KIAA1107Q9UPP5 1409 aa18.02■□□□□ 0.48
CHFR-205ENST00000450056 CLUAP1Q96AJ1 413 aa18.02■□□□□ 0.47
CHFR-205ENST00000450056 BCL2L13Q9BXK5 485 aa18.02■□□□□ 0.47
CHFR-205ENST00000450056 DUSP27Q5VZP5 1158 aa18.01■□□□□ 0.47
CHFR-205ENST00000450056 CAMSAP2Q08AD1 1489 aa18.01■□□□□ 0.47
CHFR-205ENST00000450056 ZMYND15Q9H091 742 aa18.01■□□□□ 0.47
CHFR-205ENST00000450056 ABCC2Q92887 1545 aa18■□□□□ 0.47
CHFR-205ENST00000450056 CROCC2H7BZ55 1655 aa17.99■□□□□ 0.47
CHFR-205ENST00000450056 TMF1P82094 1093 aa17.98■□□□□ 0.47
CHFR-205ENST00000450056 XRCC6P12956 609 aaKnown RBP eCLIP17.98■□□□□ 0.476e-7■■■■■ 28.8
CHFR-205ENST00000450056 TNNT2P45379 298 aaPredicted RBP17.98■□□□□ 0.47
CHFR-205ENST00000450056 ROCK1Q13464 1354 aa17.98■□□□□ 0.47
CHFR-205ENST00000450056 TRIM44Q96DX7 344 aaPredicted RBP17.97■□□□□ 0.47
CHFR-205ENST00000450056 PER1O15534 1290 aaPredicted RBP17.97■□□□□ 0.47
CHFR-205ENST00000450056 PLEKHD1A6NEE1 506 aa17.96■□□□□ 0.47
CHFR-205ENST00000450056 MFAP1P55081 439 aaKnown RBP17.96■□□□□ 0.47
CHFR-205ENST00000450056 ARID3AQ99856 593 aa17.96■□□□□ 0.47
CHFR-205ENST00000450056 SPINK5Q9NQ38 1064 aaPredicted RBP17.96■□□□□ 0.47
CHFR-205ENST00000450056 PLEKHH1Q9ULM0 1364 aa17.95■□□□□ 0.46
CHFR-205ENST00000450056 HNRNPMP52272 730 aaKnown RBP eCLIP17.95■□□□□ 0.46
CHFR-205ENST00000450056 RRP7AQ9Y3A4 280 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms