RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 LMOD2Q6P5Q4 547 aa14.26□□□□□ -0.13
SHANK2-211ENST00000449833 SF3A1Q15459 793 aaKnown RBP14.25□□□□□ -0.13
SHANK2-211ENST00000449833 CHMP4AQ9BY43 222 aa14.25□□□□□ -0.13
SHANK2-211ENST00000449833 KIAA0754O94854 1291 aa14.24□□□□□ -0.13
SHANK2-211ENST00000449833 BECN2A8MW95 431 aa14.23□□□□□ -0.13
SHANK2-211ENST00000449833 GIMAP7Q8NHV1 300 aa14.23□□□□□ -0.13
SHANK2-211ENST00000449833 CHMP4CQ96CF2 233 aa14.23□□□□□ -0.13
SHANK2-211ENST00000449833 MORC1Q86VD1 984 aa14.23□□□□□ -0.13
SHANK2-211ENST00000449833 ZNF592Q92610 1267 aa14.23□□□□□ -0.13
SHANK2-211ENST00000449833 IPO7O95373 1038 aaKnown RBP14.23□□□□□ -0.13
SHANK2-211ENST00000449833 HDAC5Q9UQL6 1122 aa14.23□□□□□ -0.13
SHANK2-211ENST00000449833 H3BQV1 296 aa14.22□□□□□ -0.13
SHANK2-211ENST00000449833 IFFO2Q5TF58 517 aa14.22□□□□□ -0.13
SHANK2-211ENST00000449833 PLEKHD1A6NEE1 506 aa14.22□□□□□ -0.13
SHANK2-211ENST00000449833 CHMP7Q8WUX9 453 aaPredicted RBP14.22□□□□□ -0.13
SHANK2-211ENST00000449833 CAVIN1Q6NZI2 390 aaKnown RBP14.22□□□□□ -0.13
SHANK2-211ENST00000449833 MNS1Q8NEH6 495 aa14.22□□□□□ -0.13
SHANK2-211ENST00000449833 MYO6Q9UM54 1294 aa14.21□□□□□ -0.13
SHANK2-211ENST00000449833 CCDC39Q9UFE4 941 aa14.21□□□□□ -0.13
SHANK2-211ENST00000449833 GORABQ5T7V8 394 aa14.2□□□□□ -0.14
SHANK2-211ENST00000449833 DDX49Q9Y6V7 483 aaKnown RBP14.2□□□□□ -0.14
SHANK2-211ENST00000449833 DDX11Q96FC9 970 aa14.2□□□□□ -0.14
SHANK2-211ENST00000449833 CFDP1Q9UEE9 299 aaPredicted RBP14.2□□□□□ -0.14
SHANK2-211ENST00000449833 DHX8Q14562 1220 aaKnown RBP14.2□□□□□ -0.14
SHANK2-211ENST00000449833 KANK1Q14678 1352 aa14.19□□□□□ -0.14
SHANK2-211ENST00000449833 FAM107BQ9H098 131 aa14.19□□□□□ -0.14
SHANK2-211ENST00000449833 CCP110O43303 1012 aa14.19□□□□□ -0.14
SHANK2-211ENST00000449833 ANKRD20A12PQ8NF67 263 aa14.18□□□□□ -0.14
SHANK2-211ENST00000449833 CALCOCO1Q9P1Z2 691 aa14.18□□□□□ -0.14
SHANK2-211ENST00000449833 HOMER1Q86YM7 354 aa14.18□□□□□ -0.14
SHANK2-211ENST00000449833 IRX3P78415 501 aaPredicted RBP14.17□□□□□ -0.14
SHANK2-211ENST00000449833 TMX4Q9H1E5 349 aaPredicted RBP14.17□□□□□ -0.14
SHANK2-211ENST00000449833 SPAG9O60271 1321 aaKnown RBP14.17□□□□□ -0.14
SHANK2-211ENST00000449833 PDCL2Q8N4E4 241 aa14.17□□□□□ -0.14
SHANK2-211ENST00000449833 GOLGA6L10A6NI86 522 aa14.17□□□□□ -0.14
SHANK2-211ENST00000449833 AXDND1Q5T1B0 1012 aaPredicted RBP14.17□□□□□ -0.14
SHANK2-211ENST00000449833 HOOK1Q9UJC3 728 aaKnown RBP14.17□□□□□ -0.14
SHANK2-211ENST00000449833 RALBP1Q15311 655 aa14.17□□□□□ -0.14
SHANK2-211ENST00000449833 FOXD4L1Q9NU39 408 aa14.17□□□□□ -0.14
SHANK2-211ENST00000449833 KCNH8Q96L42 1107 aa14.16□□□□□ -0.14
SHANK2-211ENST00000449833 SRPK2P78362 688 aaKnown RBP14.16□□□□□ -0.14
SHANK2-211ENST00000449833 PHLDB1Q86UU1 1377 aa14.16□□□□□ -0.14
SHANK2-211ENST00000449833 ANO8Q9HCE9 1232 aaPredicted RBP14.16□□□□□ -0.14
SHANK2-211ENST00000449833 CEP164Q9UPV0 1460 aa14.15□□□□□ -0.14
SHANK2-211ENST00000449833 MRE11P49959 708 aa14.15□□□□□ -0.14
SHANK2-211ENST00000449833 NOL8Q76FK4 1167 aaKnown RBP14.15□□□□□ -0.15
SHANK2-211ENST00000449833 SETSIPP0DME0 302 aa14.14□□□□□ -0.15
SHANK2-211ENST00000449833 MARCH6O60337 910 aa14.14□□□□□ -0.15
SHANK2-211ENST00000449833 FAM184AQ8NB25 1140 aa14.14□□□□□ -0.15
SHANK2-211ENST00000449833 DNAJC2Q99543 621 aaKnown RBP14.14□□□□□ -0.15
SHANK2-211ENST00000449833 DCAF11Q8TEB1 546 aa14.14□□□□□ -0.15
SHANK2-211ENST00000449833 SMC4Q9NTJ3 1288 aa14.13□□□□□ -0.15
SHANK2-211ENST00000449833 MYO15BQ96JP2 1530 aa14.13□□□□□ -0.15
SHANK2-211ENST00000449833 STK31Q9BXU1 1019 aa14.13□□□□□ -0.15
SHANK2-211ENST00000449833 VPS53Q5VIR6 699 aa14.13□□□□□ -0.15
SHANK2-211ENST00000449833 EIF3JO75822 258 aaKnown RBP14.12□□□□□ -0.15
SHANK2-211ENST00000449833 FOXD4L5Q5VV16 416 aaPredicted RBP14.12□□□□□ -0.15
SHANK2-211ENST00000449833 FOXD4L4Q8WXT5 416 aaPredicted RBP14.12□□□□□ -0.15
SHANK2-211ENST00000449833 CHMP3Q9Y3E7 222 aa14.12□□□□□ -0.15
SHANK2-211ENST00000449833 SIN3AQ96ST3 1273 aa14.12□□□□□ -0.15
SHANK2-211ENST00000449833 EIF3AQ14152 1382 aaKnown RBP14.11□□□□□ -0.15
SHANK2-211ENST00000449833 FAM161AQ3B820 660 aa14.11□□□□□ -0.15
SHANK2-211ENST00000449833 HDGFP51858 240 aaKnown RBP14.11□□□□□ -0.15
SHANK2-211ENST00000449833 PCMTD1Q96MG8 357 aaPredicted RBP14.11□□□□□ -0.15
SHANK2-211ENST00000449833 CENPQQ7L2Z9 268 aaPredicted RBP14.1□□□□□ -0.15
SHANK2-211ENST00000449833 PLCD4Q9BRC7 762 aa14.1□□□□□ -0.15
SHANK2-211ENST00000449833 CCNB3Q8WWL7 1395 aa14.1□□□□□ -0.15
SHANK2-211ENST00000449833 FHAD1B1AJZ9 1412 aa14.1□□□□□ -0.15
SHANK2-211ENST00000449833 HDGFL2Q7Z4V5 671 aaPredicted RBP14.1□□□□□ -0.15
SHANK2-211ENST00000449833 AKAP17AQ02040 695 aaKnown RBP14.1□□□□□ -0.15
SHANK2-211ENST00000449833 PDCL3Q9H2J4 239 aa14.09□□□□□ -0.15
SHANK2-211ENST00000449833 NASPP49321 788 aaPredicted RBP14.09□□□□□ -0.15
SHANK2-211ENST00000449833 FBXO3Q9UK99 471 aa14.09□□□□□ -0.15
SHANK2-211ENST00000449833 ROCK2O75116 1388 aaKnown RBP14.08□□□□□ -0.15
SHANK2-211ENST00000449833 PDIA4P13667 645 aaKnown RBP14.08□□□□□ -0.15
SHANK2-211ENST00000449833 SPATA24Q86W54 205 aa14.08□□□□□ -0.15
SHANK2-211ENST00000449833 CENPJQ9HC77 1338 aaPredicted RBP14.08□□□□□ -0.16
SHANK2-211ENST00000449833 RSPH4AQ5TD94 716 aa14.08□□□□□ -0.16
SHANK2-211ENST00000449833 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.08□□□□□ -0.16
SHANK2-211ENST00000449833 SOX12O15370 315 aa14.08□□□□□ -0.16
SHANK2-211ENST00000449833 U2AF1L5P0DN76 240 aaPredicted RBP14.07□□□□□ -0.16
SHANK2-211ENST00000449833 U2AF1Q01081 240 aaKnown RBP eCLIP14.07□□□□□ -0.16
SHANK2-211ENST00000449833 CCDC47Q96A33 483 aaKnown RBP14.07□□□□□ -0.16
SHANK2-211ENST00000449833 IFT57Q9NWB7 429 aa14.07□□□□□ -0.16
SHANK2-211ENST00000449833 CCDC173Q0VFZ6 552 aa14.07□□□□□ -0.16
SHANK2-211ENST00000449833 PAIP2Q9BPZ3 127 aaKnown RBP14.07□□□□□ -0.16
SHANK2-211ENST00000449833 CTR9Q6PD62 1173 aa14.07□□□□□ -0.16
SHANK2-211ENST00000449833 PDE3BQ13370 1112 aa14.07□□□□□ -0.16
SHANK2-211ENST00000449833 RNF20Q5VTR2 975 aa14.06□□□□□ -0.16
SHANK2-211ENST00000449833 MCTP1Q6DN14 999 aa14.06□□□□□ -0.16
SHANK2-211ENST00000449833 TCEAL9Q9UHQ7 104 aa14.06□□□□□ -0.16
SHANK2-211ENST00000449833 LRRFIP1Q32MZ4 808 aaKnown RBP14.05□□□□□ -0.16
SHANK2-211ENST00000449833 NAT10Q9H0A0 1025 aaKnown RBP14.05□□□□□ -0.16
SHANK2-211ENST00000449833 R3HCC1Q9Y3T6 440 aaKnown RBP14.05□□□□□ -0.16
SHANK2-211ENST00000449833 CCDC9Q9Y3X0 531 aaKnown RBP14.05□□□□□ -0.16
SHANK2-211ENST00000449833 ARHGAP35Q9NRY4 1499 aa14.05□□□□□ -0.16
SHANK2-211ENST00000449833 CLASRPQ8N2M8 674 aaKnown RBP14.05□□□□□ -0.16
SHANK2-211ENST00000449833 LETM1O95202 739 aaPredicted RBP14.04□□□□□ -0.16
SHANK2-211ENST00000449833 TRIM29Q14134 588 aa14.04□□□□□ -0.16
SHANK2-211ENST00000449833 SETD5Q9C0A6 1442 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms