RNA–Protein interactions for RNA: ENST00000449505.5

PBRM1-216, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-216ENST00000449505 PTPRKQ15262 1439 aa10.93□□□□□ -0.66
PBRM1-216ENST00000449505 ZC3H13Q5T200 1668 aaKnown RBP10.92□□□□□ -0.66
PBRM1-216ENST00000449505 ZNF644Q9H582 1327 aaPredicted RBP10.92□□□□□ -0.66
PBRM1-216ENST00000449505 MAST1Q9Y2H9 1570 aa10.92□□□□□ -0.66
PBRM1-216ENST00000449505 TSPY4P0CV99 314 aa10.91□□□□□ -0.66
PBRM1-216ENST00000449505 TSPY10P0CW01 314 aa10.91□□□□□ -0.66
PBRM1-216ENST00000449505 PKD2Q13563 968 aa10.91□□□□□ -0.66
PBRM1-216ENST00000449505 A2ML1A8K2U0 1454 aa10.91□□□□□ -0.66
PBRM1-216ENST00000449505 PZPP20742 1482 aa10.91□□□□□ -0.66
PBRM1-216ENST00000449505 MIA2Q96PC5 1412 aa10.91□□□□□ -0.66
PBRM1-216ENST00000449505 EIF2AK4Q9P2K8 1649 aaKnown RBP10.91□□□□□ -0.66
PBRM1-216ENST00000449505 TCOF1Q13428 1488 aaKnown RBP10.89□□□□□ -0.67
PBRM1-216ENST00000449505 RNF17Q9BXT8 1623 aaKnown RBP10.89□□□□□ -0.67
PBRM1-216ENST00000449505 MYOM3Q5VTT5 1437 aa10.89□□□□□ -0.67
PBRM1-216ENST00000449505 LTBP4Q8N2S1 1624 aa10.88□□□□□ -0.67
PBRM1-216ENST00000449505 KIF3BO15066 747 aa10.88□□□□□ -0.67
PBRM1-216ENST00000449505 POLR1AO95602 1720 aaPredicted RBP10.88□□□□□ -0.67
PBRM1-216ENST00000449505 TNRQ92752 1358 aa10.88□□□□□ -0.67
PBRM1-216ENST00000449505 NLRP1Q9C000 1473 aa10.87□□□□□ -0.67
PBRM1-216ENST00000449505 APLP2Q06481 763 aa10.87□□□□□ -0.67
PBRM1-216ENST00000449505 DNMT1P26358 1616 aaKnown RBP10.87□□□□□ -0.67
PBRM1-216ENST00000449505 SHANK2Q9UPX8 1470 aa10.87□□□□□ -0.67
PBRM1-216ENST00000449505 WASHC2CQ9Y4E1 1318 aa10.86□□□□□ -0.67
PBRM1-216ENST00000449505 CROCC2H7BZ55 1655 aa10.85□□□□□ -0.67
PBRM1-216ENST00000449505 DUOX2Q9NRD8 1548 aa10.85□□□□□ -0.67
PBRM1-216ENST00000449505 ABCC3O15438 1527 aa10.84□□□□□ -0.67
PBRM1-216ENST00000449505 UGGT1Q9NYU2 1555 aa10.83□□□□□ -0.68
PBRM1-216ENST00000449505 PTPN23Q9H3S7 1636 aa10.82□□□□□ -0.68
PBRM1-216ENST00000449505 CPS1P31327 1500 aa10.82□□□□□ -0.68
PBRM1-216ENST00000449505 PRDM15P57071 1507 aaPredicted RBP10.82□□□□□ -0.68
PBRM1-216ENST00000449505 ERBINQ96RT1 1412 aa10.82□□□□□ -0.68
PBRM1-216ENST00000449505 NCKAP5LQ9HCH0 1330 aa10.82□□□□□ -0.68
PBRM1-216ENST00000449505 SPATA31D1Q6ZQQ2 1576 aa10.82□□□□□ -0.68
PBRM1-216ENST00000449505 DEPDC5O75140 1603 aa10.81□□□□□ -0.68
PBRM1-216ENST00000449505 NEURL4Q96JN8 1562 aa10.81□□□□□ -0.68
PBRM1-216ENST00000449505 KIF15Q9NS87 1388 aa10.8□□□□□ -0.68
PBRM1-216ENST00000449505 THEMISQ8N1K5 641 aaPredicted RBP10.8□□□□□ -0.68
PBRM1-216ENST00000449505 ZNF335Q9H4Z2 1342 aaPredicted RBP10.8□□□□□ -0.68
PBRM1-216ENST00000449505 ERVK-7P63135 1459 aa10.8□□□□□ -0.68
PBRM1-216ENST00000449505 MROH1Q8NDA8 1641 aa10.8□□□□□ -0.68
PBRM1-216ENST00000449505 CEP152O94986 1710 aa10.79□□□□□ -0.68
PBRM1-216ENST00000449505 LOC105371045A0A1W2PR82 267 aa10.79□□□□□ -0.68
PBRM1-216ENST00000449505 FGD6Q6ZV73 1430 aa10.78□□□□□ -0.68
PBRM1-216ENST00000449505 KANK4Q5T7N3 995 aaPredicted RBP10.78□□□□□ -0.68
PBRM1-216ENST00000449505 ANKLE2Q86XL3 938 aa10.78□□□□□ -0.68
PBRM1-216ENST00000449505 MED14O60244 1454 aa10.78□□□□□ -0.68
PBRM1-216ENST00000449505 IQGAP1P46940 1657 aa10.78□□□□□ -0.68
PBRM1-216ENST00000449505 KANK1Q14678 1352 aa10.77□□□□□ -0.68
PBRM1-216ENST00000449505 DAPK1P53355 1430 aa10.77□□□□□ -0.68
PBRM1-216ENST00000449505 FBXO31Q5XUX0 539 aaPredicted RBP10.77□□□□□ -0.69
PBRM1-216ENST00000449505 SYNMO15061 1565 aa10.77□□□□□ -0.69
PBRM1-216ENST00000449505 ANKRD30AQ9BXX3 1397 aa10.77□□□□□ -0.69
PBRM1-216ENST00000449505 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.77□□□□□ -0.69
PBRM1-216ENST00000449505 DISP3Q9P2K9 1392 aa10.77□□□□□ -0.69
PBRM1-216ENST00000449505 NPHP4O75161 1426 aaPredicted RBP10.76□□□□□ -0.69
PBRM1-216ENST00000449505 ARHGAP31Q2M1Z3 1444 aa10.76□□□□□ -0.69
PBRM1-216ENST00000449505 UBAP1LF5GYI3 381 aa10.76□□□□□ -0.69
PBRM1-216ENST00000449505 ABCC5O15440 1437 aa10.75□□□□□ -0.69
PBRM1-216ENST00000449505 UBR1Q8IWV7 1749 aa10.75□□□□□ -0.69
PBRM1-216ENST00000449505 VWDEQ8N2E2 1590 aa10.73□□□□□ -0.69
PBRM1-216ENST00000449505 KDM5AP29375 1690 aaKnown RBP10.73□□□□□ -0.69
PBRM1-216ENST00000449505 SCAF11Q99590 1463 aaKnown RBP10.73□□□□□ -0.69
PBRM1-216ENST00000449505 LMTK2Q8IWU2 1503 aa10.73□□□□□ -0.69
PBRM1-216ENST00000449505 TOM1O60784 492 aa10.72□□□□□ -0.69
PBRM1-216ENST00000449505 ADGRL2O95490 1459 aa10.72□□□□□ -0.69
PBRM1-216ENST00000449505 SLIT1O75093 1534 aa10.72□□□□□ -0.69
PBRM1-216ENST00000449505 EFCAB6Q5THR3 1501 aa10.71□□□□□ -0.69
PBRM1-216ENST00000449505 ARHGAP23Q9P227 1491 aa10.7□□□□□ -0.7
PBRM1-216ENST00000449505 RRP7BPQ9NSQ0 103 aa10.7□□□□□ -0.7
PBRM1-216ENST00000449505 SCAF1Q9H7N4 1312 aaKnown RBP10.69□□□□□ -0.7
PBRM1-216ENST00000449505 EID1Q9Y6B2 187 aa10.69□□□□□ -0.7
PBRM1-216ENST00000449505 PIK3C2BO00750 1634 aa10.69□□□□□ -0.7
PBRM1-216ENST00000449505 RPRD2Q5VT52 1461 aaKnown RBP10.68□□□□□ -0.7
PBRM1-216ENST00000449505 PIAS4Q8N2W9 510 aaPredicted RBP10.68□□□□□ -0.7
PBRM1-216ENST00000449505 STAG3Q9UJ98 1225 aa10.68□□□□□ -0.7
PBRM1-216ENST00000449505 ADGRB3O60242 1522 aa10.68□□□□□ -0.7
PBRM1-216ENST00000449505 CFAP65Q6ZU64 1925 aaKnown RBP10.67□□□□□ -0.7
PBRM1-216ENST00000449505 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.67□□□□□ -0.71e-6■■□□□ 12.1
PBRM1-216ENST00000449505 ANKRD50Q9ULJ7 1429 aa10.67□□□□□ -0.7
PBRM1-216ENST00000449505 TET3O43151 1660 aa10.66□□□□□ -0.7
PBRM1-216ENST00000449505 TMEM2Q9UHN6 1383 aa10.65□□□□□ -0.7
PBRM1-216ENST00000449505 LRRC7Q96NW7 1537 aa10.65□□□□□ -0.7
PBRM1-216ENST00000449505 FAM50AQ14320 339 aaKnown RBP10.65□□□□□ -0.7
PBRM1-216ENST00000449505 CHIC2Q9UKJ5 165 aa10.65□□□□□ -0.7
PBRM1-216ENST00000449505 UNC13BO14795 1591 aa10.65□□□□□ -0.71
PBRM1-216ENST00000449505 GCC2Q8IWJ2 1684 aa10.64□□□□□ -0.71
PBRM1-216ENST00000449505 PIP4K2BP78356 416 aa10.64□□□□□ -0.71
PBRM1-216ENST00000449505 TXNDC2Q86VQ3 553 aa10.64□□□□□ -0.71
PBRM1-216ENST00000449505 NOS1P29475 1434 aa10.64□□□□□ -0.71
PBRM1-216ENST00000449505 STRCP1A6NGW2 1772 aa10.63□□□□□ -0.71
PBRM1-216ENST00000449505 SLC52A1Q9NWF4 448 aa10.63□□□□□ -0.71
PBRM1-216ENST00000449505 MED1Q15648 1581 aaPredicted RBP10.62□□□□□ -0.71
PBRM1-216ENST00000449505 SOCS7O14512 581 aa10.62□□□□□ -0.71
PBRM1-216ENST00000449505 ROCK1Q13464 1354 aa10.62□□□□□ -0.71
PBRM1-216ENST00000449505 NKTRP30414 1462 aaKnown RBP10.61□□□□□ -0.71
PBRM1-216ENST00000449505 HSPA1LP34931 641 aa10.6□□□□□ -0.71
PBRM1-216ENST00000449505 NWD1Q149M9 1564 aa10.6□□□□□ -0.71
PBRM1-216ENST00000449505 IQGAP3Q86VI3 1631 aa10.59□□□□□ -0.71
PBRM1-216ENST00000449505 ALKQ9UM73 1620 aa10.59□□□□□ -0.71
PBRM1-216ENST00000449505 LTKP29376 864 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms