RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 HDAC5Q9UQL6 1122 aa16■□□□□ 0.15
AC006001.3-201ENST00000449307 JPH4Q96JJ6 628 aa15.99■□□□□ 0.15
AC006001.3-201ENST00000449307 CCDC146Q8IYE0 955 aa15.99■□□□□ 0.15
AC006001.3-201ENST00000449307 SMARCA2P51531 1590 aa15.98■□□□□ 0.15
AC006001.3-201ENST00000449307 TNIKQ9UKE5 1360 aa15.98■□□□□ 0.15
AC006001.3-201ENST00000449307 SMC4Q9NTJ3 1288 aa15.98■□□□□ 0.15
AC006001.3-201ENST00000449307 AMOTL1Q8IY63 956 aa15.98■□□□□ 0.15
AC006001.3-201ENST00000449307 CFAP44Q96MT7 982 aa15.98■□□□□ 0.15
AC006001.3-201ENST00000449307 HSPA5P11021 654 aaKnown RBP15.97■□□□□ 0.15
AC006001.3-201ENST00000449307 COG3Q96JB2 828 aa15.97■□□□□ 0.15
AC006001.3-201ENST00000449307 NOL8Q76FK4 1167 aaKnown RBP15.97■□□□□ 0.15
AC006001.3-201ENST00000449307 NUTM2BA6NNL0 878 aaPredicted RBP15.96■□□□□ 0.15
AC006001.3-201ENST00000449307 NUTM2EB1AL46 878 aaPredicted RBP15.96■□□□□ 0.15
AC006001.3-201ENST00000449307 NUTM2AQ8IVF1 878 aaPredicted RBP15.96■□□□□ 0.15
AC006001.3-201ENST00000449307 PIP4K2BP78356 416 aa15.96■□□□□ 0.15
AC006001.3-201ENST00000449307 TEFQ10587 303 aa15.95■□□□□ 0.14
AC006001.3-201ENST00000449307 EIF2S2P20042 333 aaKnown RBP15.95■□□□□ 0.14
AC006001.3-201ENST00000449307 RBM33Q96EV2 1170 aaKnown RBP15.94■□□□□ 0.14
AC006001.3-201ENST00000449307 LMOD3Q0VAK6 560 aa15.94■□□□□ 0.14
AC006001.3-201ENST00000449307 MPHOSPH9Q99550 1183 aa15.94■□□□□ 0.14
AC006001.3-201ENST00000449307 MINK1Q8N4C8 1332 aaPredicted RBP15.94■□□□□ 0.14
AC006001.3-201ENST00000449307 HMMRO75330 724 aa15.94■□□□□ 0.14
AC006001.3-201ENST00000449307 CEP89Q96ST8 783 aa15.94■□□□□ 0.14
AC006001.3-201ENST00000449307 USP35Q9P2H5 1018 aa15.93■□□□□ 0.14
AC006001.3-201ENST00000449307 NECTIN2Q92692 538 aa15.93■□□□□ 0.14
AC006001.3-201ENST00000449307 DHX16O60231 1041 aaKnown RBP15.92■□□□□ 0.14
AC006001.3-201ENST00000449307 HTATSF1O43719 755 aaKnown RBP15.92■□□□□ 0.14
AC006001.3-201ENST00000449307 FBXO3Q9UK99 471 aa15.92■□□□□ 0.14
AC006001.3-201ENST00000449307 CCDC34Q96HJ3 373 aa15.9■□□□□ 0.14
AC006001.3-201ENST00000449307 NAP1L5Q96NT1 182 aaPredicted RBP15.9■□□□□ 0.14
AC006001.3-201ENST00000449307 PPP4R2Q9NY27 417 aa15.9■□□□□ 0.14
AC006001.3-201ENST00000449307 AKAP17AQ02040 695 aaKnown RBP15.89■□□□□ 0.13
AC006001.3-201ENST00000449307 NUTM2GQ5VZR2 741 aa15.89■□□□□ 0.13
AC006001.3-201ENST00000449307 A0A0U1RQG5 324 aaPredicted RBP15.89■□□□□ 0.13
AC006001.3-201ENST00000449307 ELL2O00472 640 aaPredicted RBP15.89■□□□□ 0.13
AC006001.3-201ENST00000449307 PES1O00541 588 aaKnown RBP15.89■□□□□ 0.13
AC006001.3-201ENST00000449307 TPM4P67936 248 aa15.89■□□□□ 0.13
AC006001.3-201ENST00000449307 CLUAP1Q96AJ1 413 aa15.88■□□□□ 0.13
AC006001.3-201ENST00000449307 RWDD1Q9H446 243 aaPredicted RBP15.88■□□□□ 0.13
AC006001.3-201ENST00000449307 SETD5Q9C0A6 1442 aa15.88■□□□□ 0.13
AC006001.3-201ENST00000449307 RRP7AQ9Y3A4 280 aaKnown RBP15.87■□□□□ 0.13
AC006001.3-201ENST00000449307 NEXNQ0ZGT2 675 aa15.87■□□□□ 0.13
AC006001.3-201ENST00000449307 FMN1Q68DA7 1419 aa15.86■□□□□ 0.13
AC006001.3-201ENST00000449307 CCAR1Q8IX12 1150 aaKnown RBP15.86■□□□□ 0.13
AC006001.3-201ENST00000449307 APPP05067 770 aa15.86■□□□□ 0.13
AC006001.3-201ENST00000449307 VGFO15240 615 aaPredicted RBP15.86■□□□□ 0.13
AC006001.3-201ENST00000449307 FAM177BA6PVY3 158 aa15.84■□□□□ 0.13
AC006001.3-201ENST00000449307 RILPL2Q969X0 211 aa15.84■□□□□ 0.13
AC006001.3-201ENST00000449307 STRN4Q9NRL3 753 aa15.84■□□□□ 0.13
AC006001.3-201ENST00000449307 C9orf78Q9NZ63 289 aaPredicted RBP15.84■□□□□ 0.13
AC006001.3-201ENST00000449307 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
AC006001.3-201ENST00000449307 PTPRGP23470 1445 aa15.84■□□□□ 0.13
AC006001.3-201ENST00000449307 FYB1O15117 783 aa15.84■□□□□ 0.13
AC006001.3-201ENST00000449307 MFAP1P55081 439 aaKnown RBP15.83■□□□□ 0.13
AC006001.3-201ENST00000449307 RSPH4AQ5TD94 716 aa15.83■□□□□ 0.12
AC006001.3-201ENST00000449307 NLRP2Q9NX02 1062 aa15.83■□□□□ 0.12
AC006001.3-201ENST00000449307 CCDC18Q5T9S5 1454 aa15.83■□□□□ 0.12
AC006001.3-201ENST00000449307 SYNE3Q6ZMZ3 975 aa15.83■□□□□ 0.12
AC006001.3-201ENST00000449307 SF3A1Q15459 793 aaKnown RBP15.83■□□□□ 0.12
AC006001.3-201ENST00000449307 RAPGEF4Q8WZA2 1011 aa15.82■□□□□ 0.12
AC006001.3-201ENST00000449307 TPD52L1Q16890 204 aaPredicted RBP15.82■□□□□ 0.12
AC006001.3-201ENST00000449307 EVC2Q86UK5 1308 aa15.82■□□□□ 0.12
AC006001.3-201ENST00000449307 CCDC43Q96MW1 224 aaKnown RBP15.82■□□□□ 0.12
AC006001.3-201ENST00000449307 FOXD4L1Q9NU39 408 aa15.81■□□□□ 0.12
AC006001.3-201ENST00000449307 MSNP26038 577 aaKnown RBP15.81■□□□□ 0.12
AC006001.3-201ENST00000449307 KANK4Q5T7N3 995 aaPredicted RBP15.8■□□□□ 0.12
AC006001.3-201ENST00000449307 FHOD3Q2V2M9 1422 aa15.8■□□□□ 0.12
AC006001.3-201ENST00000449307 RALBP1Q15311 655 aa15.8■□□□□ 0.12
AC006001.3-201ENST00000449307 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.8■□□□□ 0.12
AC006001.3-201ENST00000449307 KIF16BQ96L93 1317 aa15.79■□□□□ 0.12
AC006001.3-201ENST00000449307 H3BQV1 296 aa15.79■□□□□ 0.12
AC006001.3-201ENST00000449307 SLC4A3P48751 1232 aa15.79■□□□□ 0.12
AC006001.3-201ENST00000449307 IFFO2Q5TF58 517 aa15.79■□□□□ 0.12
AC006001.3-201ENST00000449307 FOXD4L5Q5VV16 416 aaPredicted RBP15.79■□□□□ 0.12
AC006001.3-201ENST00000449307 FOXD4L4Q8WXT5 416 aaPredicted RBP15.79■□□□□ 0.12
AC006001.3-201ENST00000449307 CCDC27Q2M243 656 aa15.79■□□□□ 0.12
AC006001.3-201ENST00000449307 PMFBP1Q8TBY8 1022 aa15.78■□□□□ 0.12
AC006001.3-201ENST00000449307 PLIN1O60240 522 aa15.78■□□□□ 0.12
AC006001.3-201ENST00000449307 CCDC88BA6NC98 1476 aa15.78■□□□□ 0.12
AC006001.3-201ENST00000449307 PROSER2Q86WR7 435 aaPredicted RBP15.78■□□□□ 0.12
AC006001.3-201ENST00000449307 UACAQ9BZF9 1416 aa15.78■□□□□ 0.12
AC006001.3-201ENST00000449307 PRDM2Q13029 1718 aa15.78■□□□□ 0.12
AC006001.3-201ENST00000449307 RCAN3Q9UKA8 241 aa15.78■□□□□ 0.12
AC006001.3-201ENST00000449307 ESCO1Q5FWF5 840 aa15.77■□□□□ 0.12
AC006001.3-201ENST00000449307 MTMR7Q9Y216 660 aa15.77■□□□□ 0.11
AC006001.3-201ENST00000449307 WASHC2AQ641Q2 1341 aa15.76■□□□□ 0.11
AC006001.3-201ENST00000449307 AIMP1Q12904 312 aaKnown RBP15.76■□□□□ 0.11
AC006001.3-201ENST00000449307 IKQ13123 557 aaPredicted RBP15.76■□□□□ 0.11
AC006001.3-201ENST00000449307 RBM42Q9BTD8 480 aaKnown RBP15.76■□□□□ 0.11
AC006001.3-201ENST00000449307 FAM184AQ8NB25 1140 aa15.76■□□□□ 0.11
AC006001.3-201ENST00000449307 DDX58O95786 925 aaKnown RBP15.75■□□□□ 0.11
AC006001.3-201ENST00000449307 CCDC144AA2RUR9 1427 aa15.75■□□□□ 0.11
AC006001.3-201ENST00000449307 LRRFIP1Q32MZ4 808 aaKnown RBP15.75■□□□□ 0.11
AC006001.3-201ENST00000449307 RTN4Q9NQC3 1192 aaKnown RBP15.75■□□□□ 0.11
AC006001.3-201ENST00000449307 CGNL1Q0VF96 1302 aa15.74■□□□□ 0.11
AC006001.3-201ENST00000449307 CENPJQ9HC77 1338 aaPredicted RBP15.74■□□□□ 0.11
AC006001.3-201ENST00000449307 GZF1Q9H116 711 aaPredicted RBP15.74■□□□□ 0.11
AC006001.3-201ENST00000449307 GBP4Q96PP9 640 aa15.73■□□□□ 0.11
AC006001.3-201ENST00000449307 MYO15BQ96JP2 1530 aa15.73■□□□□ 0.11
AC006001.3-201ENST00000449307 KIF3AQ9Y496 699 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms