RNA–Protein interactions for RNA: ENST00000449246.5

TRAK1-206, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-206ENST00000449246 DNMT1P26358 1616 aaKnown RBP15.49■□□□□ 0.07
TRAK1-206ENST00000449246 FRAT2O75474 233 aaPredicted RBP15.49■□□□□ 0.07
TRAK1-206ENST00000449246 RALBP1Q15311 655 aa15.49■□□□□ 0.07
TRAK1-206ENST00000449246 ADAMTS12P58397 1594 aa15.48■□□□□ 0.07
TRAK1-206ENST00000449246 ANKRD50Q9ULJ7 1429 aa15.47■□□□□ 0.07
TRAK1-206ENST00000449246 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.47■□□□□ 0.073e-7■□□□□ 10.1
TRAK1-206ENST00000449246 PBRM1Q86U86 1689 aa15.47■□□□□ 0.07
TRAK1-206ENST00000449246 NLRP13Q86W25 1043 aa15.46■□□□□ 0.07
TRAK1-206ENST00000449246 ANKRD30AQ9BXX3 1397 aa15.46■□□□□ 0.07
TRAK1-206ENST00000449246 PDE3BQ13370 1112 aa15.46■□□□□ 0.06
TRAK1-206ENST00000449246 NBPF1Q3BBV0 1214 aa15.46■□□□□ 0.06
TRAK1-206ENST00000449246 GPATCH8Q9UKJ3 1502 aaKnown RBP15.45■□□□□ 0.06
TRAK1-206ENST00000449246 C20orf194Q5TEA3 1177 aa15.45■□□□□ 0.06
TRAK1-206ENST00000449246 TSPY4P0CV99 314 aa15.45■□□□□ 0.06
TRAK1-206ENST00000449246 TSPY10P0CW01 314 aa15.45■□□□□ 0.06
TRAK1-206ENST00000449246 TROQ12816 1431 aaPredicted RBP15.45■□□□□ 0.06
TRAK1-206ENST00000449246 PLEKHD1A6NEE1 506 aa15.44■□□□□ 0.06
TRAK1-206ENST00000449246 BRD4O60885 1362 aaPredicted RBP15.44■□□□□ 0.06
TRAK1-206ENST00000449246 UBE2Q2Q8WVN8 375 aa15.44■□□□□ 0.06
TRAK1-206ENST00000449246 ROCK2O75116 1388 aaKnown RBP15.43■□□□□ 0.06
TRAK1-206ENST00000449246 KIAA0586Q9BVV6 1533 aa15.43■□□□□ 0.06
TRAK1-206ENST00000449246 MBD5Q9P267 1494 aa15.42■□□□□ 0.06
TRAK1-206ENST00000449246 KIAA0556O60303 1618 aa15.42■□□□□ 0.06
TRAK1-206ENST00000449246 JPH4Q96JJ6 628 aa15.41■□□□□ 0.06
TRAK1-206ENST00000449246 KTN1Q86UP2 1357 aaKnown RBP15.41■□□□□ 0.06
TRAK1-206ENST00000449246 KIF14Q15058 1648 aa15.41■□□□□ 0.06
TRAK1-206ENST00000449246 FAM161AQ3B820 660 aa15.41■□□□□ 0.06
TRAK1-206ENST00000449246 RAPGEF6Q8TEU7 1601 aa15.4■□□□□ 0.06
TRAK1-206ENST00000449246 ARID4BQ4LE39 1312 aaPredicted RBP15.4■□□□□ 0.06
TRAK1-206ENST00000449246 KDM5CP41229 1560 aa15.38■□□□□ 0.05
TRAK1-206ENST00000449246 LRPPRCP42704 1394 aaKnown RBP15.38■□□□□ 0.05
TRAK1-206ENST00000449246 SLKQ9H2G2 1235 aaPredicted RBP15.38■□□□□ 0.05
TRAK1-206ENST00000449246 MRC2Q9UBG0 1479 aa15.38■□□□□ 0.05
TRAK1-206ENST00000449246 GRIN2AQ12879 1464 aa15.36■□□□□ 0.05
TRAK1-206ENST00000449246 CENPQQ7L2Z9 268 aaPredicted RBP15.36■□□□□ 0.05
TRAK1-206ENST00000449246 C9orf84Q5VXU9 1444 aa15.36■□□□□ 0.05
TRAK1-206ENST00000449246 RSPH6AQ9H0K4 717 aa15.35■□□□□ 0.05
TRAK1-206ENST00000449246 WDR43Q15061 677 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRAK1-206ENST00000449246 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.34■□□□□ 0.05
TRAK1-206ENST00000449246 PANK3Q9H999 370 aa15.34■□□□□ 0.05
TRAK1-206ENST00000449246 RALGAPBQ86X10 1494 aa15.34■□□□□ 0.05
TRAK1-206ENST00000449246 POLR1AO95602 1720 aaPredicted RBP15.32■□□□□ 0.04
TRAK1-206ENST00000449246 POGKQ9P215 609 aa15.32■□□□□ 0.04
TRAK1-206ENST00000449246 PER1O15534 1290 aaPredicted RBP15.32■□□□□ 0.04
TRAK1-206ENST00000449246 FAM43AQ8N2R8 423 aa15.31■□□□□ 0.04
TRAK1-206ENST00000449246 ADAMTS8Q9UP79 889 aa15.31■□□□□ 0.04
TRAK1-206ENST00000449246 C8orf34Q49A92 452 aa15.31■□□□□ 0.04
TRAK1-206ENST00000449246 UHRF1BP1Q6BDS2 1440 aa15.31■□□□□ 0.04
TRAK1-206ENST00000449246 IFT140Q96RY7 1462 aa15.31■□□□□ 0.04
TRAK1-206ENST00000449246 SPRYD3Q8NCJ5 442 aa15.3■□□□□ 0.04
TRAK1-206ENST00000449246 ADGRL2O95490 1459 aa15.3■□□□□ 0.04
TRAK1-206ENST00000449246 CANXP27824 592 aaKnown RBP15.3■□□□□ 0.04
TRAK1-206ENST00000449246 DISP3Q9P2K9 1392 aa15.29■□□□□ 0.04
TRAK1-206ENST00000449246 NAP1L5Q96NT1 182 aaPredicted RBP15.28■□□□□ 0.04
TRAK1-206ENST00000449246 GZF1Q9H116 711 aaPredicted RBP15.28■□□□□ 0.04
TRAK1-206ENST00000449246 BECN1Q14457 450 aa15.27■□□□□ 0.04
TRAK1-206ENST00000449246 CARMIL2Q6F5E8 1435 aa15.26■□□□□ 0.03
TRAK1-206ENST00000449246 CCDC146Q8IYE0 955 aa15.26■□□□□ 0.03
TRAK1-206ENST00000449246 CCDC144AA2RUR9 1427 aa15.26■□□□□ 0.03
TRAK1-206ENST00000449246 ATP10BO94823 1461 aa15.26■□□□□ 0.03
TRAK1-206ENST00000449246 GOLGA2Q08379 1002 aa15.26■□□□□ 0.03
TRAK1-206ENST00000449246 PARD3Q8TEW0 1356 aa15.26■□□□□ 0.03
TRAK1-206ENST00000449246 TESK2Q96S53 571 aa15.25■□□□□ 0.03
TRAK1-206ENST00000449246 KDM2BQ8NHM5 1336 aa15.25■□□□□ 0.03
TRAK1-206ENST00000449246 MAGI1Q96QZ7 1491 aaPredicted RBP15.24■□□□□ 0.03
TRAK1-206ENST00000449246 CEP170Q5SW79 1584 aa15.24■□□□□ 0.03
TRAK1-206ENST00000449246 ADGBQ8N7X0 1667 aa15.24■□□□□ 0.03
TRAK1-206ENST00000449246 EIF4G3O43432 1585 aaKnown RBP15.23■□□□□ 0.03
TRAK1-206ENST00000449246 KNSTRNQ9Y448 316 aa15.23■□□□□ 0.03
TRAK1-206ENST00000449246 ITSN2Q9NZM3 1697 aa15.23■□□□□ 0.03
TRAK1-206ENST00000449246 GLIPR1L2Q4G1C9 344 aa15.22■□□□□ 0.03
TRAK1-206ENST00000449246 PRAG1Q86YV5 1406 aa15.22■□□□□ 0.03
TRAK1-206ENST00000449246 UPF2Q9HAU5 1272 aaKnown RBP15.22■□□□□ 0.03
TRAK1-206ENST00000449246 BCAR3O75815 825 aa15.21■□□□□ 0.03
TRAK1-206ENST00000449246 L1TD1Q5T7N2 865 aaKnown RBP15.21■□□□□ 0.03
TRAK1-206ENST00000449246 DUSP27Q5VZP5 1158 aa15.21■□□□□ 0.02
TRAK1-206ENST00000449246 ERCC6Q03468 1493 aa15.2■□□□□ 0.02
TRAK1-206ENST00000449246 TMF1P82094 1093 aa15.2■□□□□ 0.02
TRAK1-206ENST00000449246 RRAGDQ9NQL2 400 aaPredicted RBP15.2■□□□□ 0.02
TRAK1-206ENST00000449246 ABCC10Q5T3U5 1492 aa15.2■□□□□ 0.02
TRAK1-206ENST00000449246 PNNQ9H307 717 aaKnown RBP15.19■□□□□ 0.02
TRAK1-206ENST00000449246 SEC24BO95487 1268 aa15.19■□□□□ 0.02
TRAK1-206ENST00000449246 ARHGEF12Q9NZN5 1544 aa15.19■□□□□ 0.02
TRAK1-206ENST00000449246 CROCC2H7BZ55 1655 aa15.18■□□□□ 0.02
TRAK1-206ENST00000449246 VSIG10Q8N0Z9 540 aa15.18■□□□□ 0.02
TRAK1-206ENST00000449246 FAM135AQ9P2D6 1515 aa15.18■□□□□ 0.02
TRAK1-206ENST00000449246 CDC42BPAQ5VT25 1732 aa15.18■□□□□ 0.02
TRAK1-206ENST00000449246 SYNJ2O15056 1496 aa15.17■□□□□ 0.02
TRAK1-206ENST00000449246 COG6Q9Y2V7 657 aa15.17■□□□□ 0.02
TRAK1-206ENST00000449246 PLA2R1Q13018 1463 aa15.17■□□□□ 0.02
TRAK1-206ENST00000449246 NEUROD2Q15784 382 aa15.17■□□□□ 0.02
TRAK1-206ENST00000449246 APAF1O14727 1248 aa15.16■□□□□ 0.02
TRAK1-206ENST00000449246 IGHDP01880 384 aa15.16■□□□□ 0.02
TRAK1-206ENST00000449246 A2MP01023 1474 aa15.16■□□□□ 0.02
TRAK1-206ENST00000449246 GOLGA6L3A6NEY3 463 aa15.16■□□□□ 0.02
TRAK1-206ENST00000449246 ERBINQ96RT1 1412 aa15.15■□□□□ 0.02
TRAK1-206ENST00000449246 KDM5DQ9BY66 1539 aa15.15■□□□□ 0.02
TRAK1-206ENST00000449246 PLEKHH1Q9ULM0 1364 aa15.15■□□□□ 0.02
TRAK1-206ENST00000449246 PTPRGP23470 1445 aa15.15■□□□□ 0.02
TRAK1-206ENST00000449246 PPP2R1AP30153 589 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms