RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 HIRIP3Q9BW71 556 aaPredicted RBP11.62□□□□□ -0.55
CPSF7-206ENST00000448745 ZFYVE16Q7Z3T8 1539 aa11.62□□□□□ -0.55
CPSF7-206ENST00000448745 KIDINS220Q9ULH0 1771 aa11.62□□□□□ -0.55
CPSF7-206ENST00000448745 POLR1AO95602 1720 aaPredicted RBP11.61□□□□□ -0.55
CPSF7-206ENST00000448745 HNRNPUQ00839 825 aaKnown RBP eCLIP11.61□□□□□ -0.55
CPSF7-206ENST00000448745 ZMYM4Q5VZL5 1548 aa11.61□□□□□ -0.55
CPSF7-206ENST00000448745 NAIPQ13075 1403 aa11.61□□□□□ -0.55
CPSF7-206ENST00000448745 NCOA1Q15788 1441 aa11.61□□□□□ -0.55
CPSF7-206ENST00000448745 ROCK1Q13464 1354 aa11.6□□□□□ -0.55
CPSF7-206ENST00000448745 MLH3Q9UHC1 1453 aa11.6□□□□□ -0.55
CPSF7-206ENST00000448745 ADGBQ8N7X0 1667 aa11.6□□□□□ -0.55
CPSF7-206ENST00000448745 RTEL1-TNFRSF6BF6WH68 1400 aa11.6□□□□□ -0.55
CPSF7-206ENST00000448745 MSH5O43196 834 aa11.6□□□□□ -0.55
CPSF7-206ENST00000448745 CHIC2Q9UKJ5 165 aa11.6□□□□□ -0.55
CPSF7-206ENST00000448745 CNTLNQ9NXG0 1405 aa11.59□□□□□ -0.55
CPSF7-206ENST00000448745 PLXNC1O60486 1568 aa11.59□□□□□ -0.55
CPSF7-206ENST00000448745 PPP4R2Q9NY27 417 aa11.59□□□□□ -0.55
CPSF7-206ENST00000448745 ATP7AQ04656 1500 aa11.59□□□□□ -0.55
CPSF7-206ENST00000448745 HECW2Q9P2P5 1572 aa11.58□□□□□ -0.56
CPSF7-206ENST00000448745 TSPY4P0CV99 314 aa11.57□□□□□ -0.56
CPSF7-206ENST00000448745 TSPY10P0CW01 314 aa11.57□□□□□ -0.56
CPSF7-206ENST00000448745 SPAG9O60271 1321 aaKnown RBP11.57□□□□□ -0.56
CPSF7-206ENST00000448745 KDM6BO15054 1643 aa11.57□□□□□ -0.56
CPSF7-206ENST00000448745 ABCA6Q8N139 1617 aa11.56□□□□□ -0.56
CPSF7-206ENST00000448745 YEATS2Q9ULM3 1422 aa11.56□□□□□ -0.56
CPSF7-206ENST00000448745 RRP7BPQ9NSQ0 103 aa11.55□□□□□ -0.56
CPSF7-206ENST00000448745 MAGI2Q86UL8 1455 aa11.55□□□□□ -0.56
CPSF7-206ENST00000448745 ANKRD30AQ9BXX3 1397 aa11.55□□□□□ -0.56
CPSF7-206ENST00000448745 DIP2CQ9Y2E4 1556 aa11.55□□□□□ -0.56
CPSF7-206ENST00000448745 FOXD1Q16676 465 aa11.55□□□□□ -0.56
CPSF7-206ENST00000448745 KIF15Q9NS87 1388 aa11.54□□□□□ -0.56
CPSF7-206ENST00000448745 HSPA5P11021 654 aaKnown RBP11.53□□□□□ -0.56
CPSF7-206ENST00000448745 SIGLEC1Q9BZZ2 1709 aa11.53□□□□□ -0.56
CPSF7-206ENST00000448745 EIF4G2P78344 907 aaKnown RBP eCLIP11.52□□□□□ -0.56
CPSF7-206ENST00000448745 WASHC2AQ641Q2 1341 aa11.52□□□□□ -0.56
CPSF7-206ENST00000448745 ARHGEF40Q8TER5 1519 aa11.52□□□□□ -0.57
CPSF7-206ENST00000448745 DUOX2Q9NRD8 1548 aa11.52□□□□□ -0.57
CPSF7-206ENST00000448745 ANKRD50Q9ULJ7 1429 aa11.51□□□□□ -0.57
CPSF7-206ENST00000448745 ZBED9Q6R2W3 1325 aa11.51□□□□□ -0.57
CPSF7-206ENST00000448745 DHX29Q7Z478 1369 aaKnown RBP11.5□□□□□ -0.57
CPSF7-206ENST00000448745 REREQ9P2R6 1566 aa11.5□□□□□ -0.57
CPSF7-206ENST00000448745 A2MP01023 1474 aa11.49□□□□□ -0.57
CPSF7-206ENST00000448745 CCDC7Q96M83 1385 aa11.49□□□□□ -0.57
CPSF7-206ENST00000448745 ADRA2BP18089 450 aa11.49□□□□□ -0.57
CPSF7-206ENST00000448745 IRX6P78412 446 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-206ENST00000448745 BCORL1Q5H9F3 1711 aa11.49□□□□□ -0.57
CPSF7-206ENST00000448745 ATP10AO60312 1499 aa11.49□□□□□ -0.57
CPSF7-206ENST00000448745 ERBINQ96RT1 1412 aa11.49□□□□□ -0.57
CPSF7-206ENST00000448745 PPP6R1Q9UPN7 881 aa11.47□□□□□ -0.57
CPSF7-206ENST00000448745 EIF2AK4Q9P2K8 1649 aaKnown RBP11.47□□□□□ -0.57
CPSF7-206ENST00000448745 DEPDC5O75140 1603 aa11.47□□□□□ -0.57
CPSF7-206ENST00000448745 MROH1Q8NDA8 1641 aa11.47□□□□□ -0.57
CPSF7-206ENST00000448745 AGLP35573 1532 aa11.46□□□□□ -0.58
CPSF7-206ENST00000448745 PRKRIP1Q9H875 184 aaPredicted RBP11.46□□□□□ -0.58
CPSF7-206ENST00000448745 UNC13BO14795 1591 aa11.45□□□□□ -0.58
CPSF7-206ENST00000448745 RNF17Q9BXT8 1623 aaKnown RBP11.45□□□□□ -0.58
CPSF7-206ENST00000448745 MRS2Q9HD23 443 aa11.44□□□□□ -0.58
CPSF7-206ENST00000448745 SMG6Q86US8 1419 aaKnown RBP11.44□□□□□ -0.58
CPSF7-206ENST00000448745 VWDEQ8N2E2 1590 aa11.43□□□□□ -0.58
CPSF7-206ENST00000448745 RPRD2Q5VT52 1461 aaKnown RBP11.43□□□□□ -0.58
CPSF7-206ENST00000448745 NOP58Q9Y2X3 529 aaKnown RBP11.43□□□□□ -0.58
CPSF7-206ENST00000448745 PRDM15P57071 1507 aaPredicted RBP11.43□□□□□ -0.58
CPSF7-206ENST00000448745 KDM5DQ9BY66 1539 aa11.43□□□□□ -0.58
CPSF7-206ENST00000448745 KIF3BO15066 747 aa11.42□□□□□ -0.58
CPSF7-206ENST00000448745 PZPP20742 1482 aa11.42□□□□□ -0.58
CPSF7-206ENST00000448745 B4GALNT3Q6L9W6 998 aa11.4□□□□□ -0.58
CPSF7-206ENST00000448745 MPHOSPH9Q99550 1183 aa11.4□□□□□ -0.58
CPSF7-206ENST00000448745 IQGAP3Q86VI3 1631 aa11.4□□□□□ -0.58
CPSF7-206ENST00000448745 DEKP35659 375 aaKnown RBP11.4□□□□□ -0.58
CPSF7-206ENST00000448745 FAM9BQ8IZU0 186 aa11.4□□□□□ -0.58
CPSF7-206ENST00000448745 CCDC184Q52MB2 194 aa11.39□□□□□ -0.59
CPSF7-206ENST00000448745 L3MBTL2Q969R5 705 aa11.39□□□□□ -0.59
CPSF7-206ENST00000448745 FAM135AQ9P2D6 1515 aa11.39□□□□□ -0.59
CPSF7-206ENST00000448745 NUP155O75694 1391 aa11.38□□□□□ -0.59
CPSF7-206ENST00000448745 SPATA31E1Q6ZUB1 1445 aa11.38□□□□□ -0.59
CPSF7-206ENST00000448745 ANKRD30BQ9BXX2 1392 aa11.38□□□□□ -0.59
CPSF7-206ENST00000448745 ANP32AP39687 249 aaKnown RBP11.37□□□□□ -0.59
CPSF7-206ENST00000448745 KIF7Q2M1P5 1343 aa11.37□□□□□ -0.59
CPSF7-206ENST00000448745 RNF123Q5XPI4 1314 aa11.37□□□□□ -0.59
CPSF7-206ENST00000448745 LMTK2Q8IWU2 1503 aa11.36□□□□□ -0.59
CPSF7-206ENST00000448745 KDM4FA0A1W2PPD8 638 aa11.36□□□□□ -0.59
CPSF7-206ENST00000448745 NUDCQ9Y266 331 aa11.36□□□□□ -0.59
CPSF7-206ENST00000448745 ABCC3O15438 1527 aa11.36□□□□□ -0.59
CPSF7-206ENST00000448745 CEP152O94986 1710 aa11.36□□□□□ -0.59
CPSF7-206ENST00000448745 GGT6Q6P531 493 aa11.35□□□□□ -0.59
CPSF7-206ENST00000448745 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.35□□□□□ -0.592e-8■□□□□ 11
CPSF7-206ENST00000448745 TET3O43151 1660 aa11.35□□□□□ -0.59
CPSF7-206ENST00000448745 C11orf95C9JLR9 678 aaPredicted RBP11.35□□□□□ -0.59
CPSF7-206ENST00000448745 ARID4BQ4LE39 1312 aaPredicted RBP11.34□□□□□ -0.59
CPSF7-206ENST00000448745 E9PCH4 1651 aa11.34□□□□□ -0.59
CPSF7-206ENST00000448745 ZC3H13Q5T200 1668 aaKnown RBP11.34□□□□□ -0.59
CPSF7-206ENST00000448745 EFCAB6Q5THR3 1501 aa11.33□□□□□ -0.6
CPSF7-206ENST00000448745 CCDC136Q96JN2 1154 aa11.32□□□□□ -0.6
CPSF7-206ENST00000448745 SLC4A1APQ9BWU0 796 aaKnown RBP11.32□□□□□ -0.6
CPSF7-206ENST00000448745 ROCK2O75116 1388 aaKnown RBP11.32□□□□□ -0.6
CPSF7-206ENST00000448745 CAMSAP1Q5T5Y3 1602 aa11.32□□□□□ -0.6
CPSF7-206ENST00000448745 ADAMTSL3P82987 1691 aa11.32□□□□□ -0.6
CPSF7-206ENST00000448745 MLECQ14165 292 aa11.32□□□□□ -0.6
CPSF7-206ENST00000448745 NBPF8Q3BBV2 869 aa11.32□□□□□ -0.6
CPSF7-206ENST00000448745 RTL5Q5HYW3 569 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms