RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 LRRC9Q6ZRR7 1453 aa21.6■■□□□ 1.05
PDLIM2-213ENST00000448520 FAM135AQ9P2D6 1515 aa21.6■■□□□ 1.05
PDLIM2-213ENST00000448520 ARHGEF5Q12774 1597 aa21.59■■□□□ 1.05
PDLIM2-213ENST00000448520 A2ML1A8K2U0 1454 aa21.58■■□□□ 1.05
PDLIM2-213ENST00000448520 TCOF1Q13428 1488 aaKnown RBP21.58■■□□□ 1.05
PDLIM2-213ENST00000448520 FBXO31Q5XUX0 539 aaPredicted RBP21.58■■□□□ 1.05
PDLIM2-213ENST00000448520 TNRQ92752 1358 aa21.57■■□□□ 1.04
PDLIM2-213ENST00000448520 ZNF335Q9H4Z2 1342 aaPredicted RBP21.56■■□□□ 1.04
PDLIM2-213ENST00000448520 MAP3K1Q13233 1512 aa21.56■■□□□ 1.04
PDLIM2-213ENST00000448520 PZPP20742 1482 aa21.55■■□□□ 1.04
PDLIM2-213ENST00000448520 KDM5DQ9BY66 1539 aa21.55■■□□□ 1.04
PDLIM2-213ENST00000448520 KANK4Q5T7N3 995 aaPredicted RBP21.54■■□□□ 1.04
PDLIM2-213ENST00000448520 THEMISQ8N1K5 641 aaPredicted RBP21.54■■□□□ 1.04
PDLIM2-213ENST00000448520 DNMT1P26358 1616 aaKnown RBP21.53■■□□□ 1.04
PDLIM2-213ENST00000448520 MIA2Q96PC5 1412 aa21.53■■□□□ 1.04
PDLIM2-213ENST00000448520 ANKLE2Q86XL3 938 aa21.51■■□□□ 1.03
PDLIM2-213ENST00000448520 APLP2Q06481 763 aa21.49■■□□□ 1.03
PDLIM2-213ENST00000448520 DISP3Q9P2K9 1392 aa21.48■■□□□ 1.03
PDLIM2-213ENST00000448520 MYOM3Q5VTT5 1437 aa21.48■■□□□ 1.03
PDLIM2-213ENST00000448520 UBAP1LF5GYI3 381 aa21.48■■□□□ 1.03
PDLIM2-213ENST00000448520 MAST1Q9Y2H9 1570 aa21.48■■□□□ 1.03
PDLIM2-213ENST00000448520 NLRP1Q9C000 1473 aa21.47■■□□□ 1.03
PDLIM2-213ENST00000448520 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.44■■□□□ 1.02
PDLIM2-213ENST00000448520 RNF17Q9BXT8 1623 aaKnown RBP21.42■■□□□ 1.02
PDLIM2-213ENST00000448520 UGGT1Q9NYU2 1555 aa21.41■■□□□ 1.02
PDLIM2-213ENST00000448520 POLR1AO95602 1720 aaPredicted RBP21.41■■□□□ 1.02
PDLIM2-213ENST00000448520 EIF2AK4Q9P2K8 1649 aaKnown RBP21.4■■□□□ 1.02
PDLIM2-213ENST00000448520 ABCC3O15438 1527 aa21.39■■□□□ 1.02
PDLIM2-213ENST00000448520 DUOX2Q9NRD8 1548 aa21.39■■□□□ 1.01
PDLIM2-213ENST00000448520 ZC3H13Q5T200 1668 aaKnown RBP21.38■■□□□ 1.01
PDLIM2-213ENST00000448520 TOM1O60784 492 aa21.38■■□□□ 1.01
PDLIM2-213ENST00000448520 CPS1P31327 1500 aa21.38■■□□□ 1.01
PDLIM2-213ENST00000448520 SHANK2Q9UPX8 1470 aa21.38■■□□□ 1.01
PDLIM2-213ENST00000448520 NEURL4Q96JN8 1562 aa21.37■■□□□ 1.01
PDLIM2-213ENST00000448520 MED14O60244 1454 aa21.37■■□□□ 1.01
PDLIM2-213ENST00000448520 CFAP65Q6ZU64 1925 aaKnown RBP21.36■■□□□ 1.01
PDLIM2-213ENST00000448520 ILDR2Q71H61 639 aa21.36■■□□□ 1.01
PDLIM2-213ENST00000448520 SPATA31D1Q6ZQQ2 1576 aa21.36■■□□□ 1.01
PDLIM2-213ENST00000448520 RRP7BPQ9NSQ0 103 aa21.35■■□□□ 1.01
PDLIM2-213ENST00000448520 NPHP4O75161 1426 aaPredicted RBP21.35■■□□□ 1.01
PDLIM2-213ENST00000448520 KIF15Q9NS87 1388 aa21.35■■□□□ 1.01
PDLIM2-213ENST00000448520 DEPDC5O75140 1603 aa21.34■■□□□ 1.01
PDLIM2-213ENST00000448520 ABCC5O15440 1437 aa21.34■■□□□ 1.01
PDLIM2-213ENST00000448520 ERVK-7P63135 1459 aa21.33■■□□□ 1.01
PDLIM2-213ENST00000448520 ERBINQ96RT1 1412 aa21.31■■□□□ 1
PDLIM2-213ENST00000448520 MROH1Q8NDA8 1641 aa21.31■■□□□ 1
PDLIM2-213ENST00000448520 SOCS7O14512 581 aa21.31■■□□□ 1
PDLIM2-213ENST00000448520 ARHGAP31Q2M1Z3 1444 aa21.3■■□□□ 1
PDLIM2-213ENST00000448520 PTPN23Q9H3S7 1636 aa21.3■■□□□ 1
PDLIM2-213ENST00000448520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.29■■□□□ 1
PDLIM2-213ENST00000448520 KANK1Q14678 1352 aa21.28■■□□□ 1
PDLIM2-213ENST00000448520 PIP4K2BP78356 416 aa21.28■■□□□ 1
PDLIM2-213ENST00000448520 DAPK1P53355 1430 aa21.28■■□□□ 1
PDLIM2-213ENST00000448520 FGD6Q6ZV73 1430 aa21.28■■□□□ 1
PDLIM2-213ENST00000448520 SCAF1Q9H7N4 1312 aaKnown RBP21.28■■□□□ 1
PDLIM2-213ENST00000448520 VWDEQ8N2E2 1590 aa21.27■■□□□ 1
PDLIM2-213ENST00000448520 CEP152O94986 1710 aa21.27■■□□□ 1
PDLIM2-213ENST00000448520 ANKRD30AQ9BXX3 1397 aa21.27■■□□□ 1
PDLIM2-213ENST00000448520 IQGAP1P46940 1657 aa21.26■□□□□ 0.99
PDLIM2-213ENST00000448520 TXNDC2Q86VQ3 553 aa21.26■□□□□ 0.99
PDLIM2-213ENST00000448520 EID1Q9Y6B2 187 aa21.25■□□□□ 0.99
PDLIM2-213ENST00000448520 PRDM15P57071 1507 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-213ENST00000448520 HSPA1LP34931 641 aa21.24■□□□□ 0.99
PDLIM2-213ENST00000448520 CHIC2Q9UKJ5 165 aa21.24■□□□□ 0.99
PDLIM2-213ENST00000448520 CROCC2H7BZ55 1655 aa21.24■□□□□ 0.99
PDLIM2-213ENST00000448520 UBR1Q8IWV7 1749 aa21.22■□□□□ 0.99
PDLIM2-213ENST00000448520 LTKP29376 864 aa21.22■□□□□ 0.99
PDLIM2-213ENST00000448520 STAG3Q9UJ98 1225 aa21.22■□□□□ 0.99
PDLIM2-213ENST00000448520 SCAF11Q99590 1463 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-213ENST00000448520 ARHGAP23Q9P227 1491 aa21.19■□□□□ 0.98
PDLIM2-213ENST00000448520 SLIT1O75093 1534 aa21.19■□□□□ 0.98
PDLIM2-213ENST00000448520 IDI1Q13907 227 aa21.17■□□□□ 0.98
PDLIM2-213ENST00000448520 LRRC7Q96NW7 1537 aa21.17■□□□□ 0.98
PDLIM2-213ENST00000448520 LMTK2Q8IWU2 1503 aa21.16■□□□□ 0.98
PDLIM2-213ENST00000448520 TMEM2Q9UHN6 1383 aa21.15■□□□□ 0.98
PDLIM2-213ENST00000448520 FAM50AQ14320 339 aaKnown RBP21.15■□□□□ 0.98
PDLIM2-213ENST00000448520 SLC52A1Q9NWF4 448 aa21.14■□□□□ 0.97
PDLIM2-213ENST00000448520 STRCP1A6NGW2 1772 aa21.14■□□□□ 0.97
PDLIM2-213ENST00000448520 PPARGC1BQ86YN6 1023 aaKnown RBP21.13■□□□□ 0.97
PDLIM2-213ENST00000448520 ADGRL2O95490 1459 aa21.12■□□□□ 0.97
PDLIM2-213ENST00000448520 PIK3C2BO00750 1634 aa21.11■□□□□ 0.97
PDLIM2-213ENST00000448520 SYNMO15061 1565 aa21.1■□□□□ 0.97
PDLIM2-213ENST00000448520 KDM5AP29375 1690 aaKnown RBP21.1■□□□□ 0.97
PDLIM2-213ENST00000448520 NOS1P29475 1434 aa21.09■□□□□ 0.97
PDLIM2-213ENST00000448520 EFCAB6Q5THR3 1501 aa21.09■□□□□ 0.97
PDLIM2-213ENST00000448520 ALKQ9UM73 1620 aa21.08■□□□□ 0.97
PDLIM2-213ENST00000448520 ANKRD50Q9ULJ7 1429 aa21.08■□□□□ 0.97
PDLIM2-213ENST00000448520 KCNA6P17658 529 aa21.07■□□□□ 0.96
PDLIM2-213ENST00000448520 HDGFP51858 240 aaKnown RBP21.06■□□□□ 0.96
PDLIM2-213ENST00000448520 RPRD2Q5VT52 1461 aaKnown RBP21.05■□□□□ 0.96
PDLIM2-213ENST00000448520 MED1Q15648 1581 aaPredicted RBP21.03■□□□□ 0.96
PDLIM2-213ENST00000448520 SLC26A8Q96RN1 970 aa21.02■□□□□ 0.96
PDLIM2-213ENST00000448520 PROSER2Q86WR7 435 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-213ENST00000448520 BCANQ96GW7 911 aa21.01■□□□□ 0.95
PDLIM2-213ENST00000448520 PHF23Q9BUL5 403 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-213ENST00000448520 TET3O43151 1660 aa20.99■□□□□ 0.95
PDLIM2-213ENST00000448520 ADGRB3O60242 1522 aa20.99■□□□□ 0.95
PDLIM2-213ENST00000448520 SENP3Q9H4L4 574 aaPredicted RBP20.98■□□□□ 0.95
PDLIM2-213ENST00000448520 TMEM94Q12767 1356 aa20.97■□□□□ 0.95
PDLIM2-213ENST00000448520 XIRP1Q702N8 1843 aaKnown RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms