RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 CALD1Q05682 793 aaKnown RBP12.07□□□□□ -0.48
SYNPO2-204ENST00000448416 RBM10P98175 930 aaKnown RBP12.06□□□□□ -0.48
SYNPO2-204ENST00000448416 TRAK2O60296 914 aa12.06□□□□□ -0.48
SYNPO2-204ENST00000448416 ERBB4Q15303 1308 aa12.06□□□□□ -0.48
SYNPO2-204ENST00000448416 SPRYD3Q8NCJ5 442 aa12.06□□□□□ -0.48
SYNPO2-204ENST00000448416 UPF2Q9HAU5 1272 aaKnown RBP12.06□□□□□ -0.48
SYNPO2-204ENST00000448416 GRPEL1Q9HAV7 217 aa12.06□□□□□ -0.48
SYNPO2-204ENST00000448416 PARD3Q8TEW0 1356 aa12.05□□□□□ -0.48
SYNPO2-204ENST00000448416 LRRIQ1Q96JM4 1722 aa12.05□□□□□ -0.48
SYNPO2-204ENST00000448416 THOC2Q8NI27 1593 aaKnown RBP12.05□□□□□ -0.48
SYNPO2-204ENST00000448416 TBC1D2Q9BYX2 928 aa12.04□□□□□ -0.48
SYNPO2-204ENST00000448416 MBD5Q9P267 1494 aa12.04□□□□□ -0.48
SYNPO2-204ENST00000448416 CC2D1BQ5T0F9 858 aaKnown RBP12.03□□□□□ -0.48
SYNPO2-204ENST00000448416 KIAA1211Q6ZU35 1233 aa12.03□□□□□ -0.48
SYNPO2-204ENST00000448416 KIF14Q15058 1648 aa12.03□□□□□ -0.48
SYNPO2-204ENST00000448416 GRIN2BQ13224 1484 aa12.03□□□□□ -0.48
SYNPO2-204ENST00000448416 PLEKHH2Q8IVE3 1493 aa12.03□□□□□ -0.48
SYNPO2-204ENST00000448416 BLMP54132 1417 aaPredicted RBP12.03□□□□□ -0.48
SYNPO2-204ENST00000448416 ARHGEF11O15085 1522 aa12.03□□□□□ -0.48
SYNPO2-204ENST00000448416 PRDM4Q9UKN5 801 aa12.03□□□□□ -0.48
SYNPO2-204ENST00000448416 DUSP27Q5VZP5 1158 aa12.02□□□□□ -0.48
SYNPO2-204ENST00000448416 MAPK8IP3Q9UPT6 1336 aa12.02□□□□□ -0.49
SYNPO2-204ENST00000448416 ZMYM4Q5VZL5 1548 aa12.01□□□□□ -0.49
SYNPO2-204ENST00000448416 IGHDP01880 384 aa12.01□□□□□ -0.49
SYNPO2-204ENST00000448416 KDM2AQ9Y2K7 1162 aa12.01□□□□□ -0.49
SYNPO2-204ENST00000448416 CTTNBP2Q8WZ74 1663 aa12.01□□□□□ -0.49
SYNPO2-204ENST00000448416 VIRMAQ69YN4 1812 aaKnown RBP12□□□□□ -0.49
SYNPO2-204ENST00000448416 INSRP06213 1382 aa12□□□□□ -0.49
SYNPO2-204ENST00000448416 CHMP5Q9NZZ3 219 aa12□□□□□ -0.49
SYNPO2-204ENST00000448416 ISY1Q9ULR0 285 aaKnown RBP12□□□□□ -0.49
SYNPO2-204ENST00000448416 MAGI3Q5TCQ9 1506 aa12□□□□□ -0.49
SYNPO2-204ENST00000448416 GOLGA2Q08379 1002 aa12□□□□□ -0.49
SYNPO2-204ENST00000448416 ROCK1Q13464 1354 aa12□□□□□ -0.49
SYNPO2-204ENST00000448416 AAMPQ13685 434 aa11.99□□□□□ -0.49
SYNPO2-204ENST00000448416 ADAMTS8Q9UP79 889 aa11.99□□□□□ -0.49
SYNPO2-204ENST00000448416 RALGAPBQ86X10 1494 aa11.99□□□□□ -0.49
SYNPO2-204ENST00000448416 TBC1D32Q96NH3 1257 aa11.99□□□□□ -0.49
SYNPO2-204ENST00000448416 PKD2Q13563 968 aa11.98□□□□□ -0.49
SYNPO2-204ENST00000448416 EIF3AQ14152 1382 aaKnown RBP11.98□□□□□ -0.49
SYNPO2-204ENST00000448416 PER1O15534 1290 aaPredicted RBP11.97□□□□□ -0.49
SYNPO2-204ENST00000448416 DDX11L8A8MPP1 907 aa11.97□□□□□ -0.49
SYNPO2-204ENST00000448416 DAPK1P53355 1430 aa11.97□□□□□ -0.49
SYNPO2-204ENST00000448416 KIAA1107Q9UPP5 1409 aa11.97□□□□□ -0.49
SYNPO2-204ENST00000448416 NLRP1Q9C000 1473 aa11.96□□□□□ -0.49
SYNPO2-204ENST00000448416 E9PCH4 1651 aa11.96□□□□□ -0.49
SYNPO2-204ENST00000448416 HMGXB3Q12766 1538 aa11.96□□□□□ -0.49
SYNPO2-204ENST00000448416 WDR43Q15061 677 aaKnown RBP eCLIP11.96□□□□□ -0.49
SYNPO2-204ENST00000448416 PLEKHH1Q9ULM0 1364 aa11.96□□□□□ -0.5
SYNPO2-204ENST00000448416 PZPP20742 1482 aa11.96□□□□□ -0.5
SYNPO2-204ENST00000448416 MAP7D2Q96T17 732 aa11.96□□□□□ -0.5
SYNPO2-204ENST00000448416 FAM13BQ9NYF5 915 aa11.96□□□□□ -0.5
SYNPO2-204ENST00000448416 UHRF1BP1Q6BDS2 1440 aa11.95□□□□□ -0.5
SYNPO2-204ENST00000448416 BCAR3O75815 825 aa11.94□□□□□ -0.5
SYNPO2-204ENST00000448416 ARID3CA6NKF2 412 aa11.94□□□□□ -0.5
SYNPO2-204ENST00000448416 ABCC5O15440 1437 aa11.94□□□□□ -0.5
SYNPO2-204ENST00000448416 OFD1O75665 1012 aa11.94□□□□□ -0.5
SYNPO2-204ENST00000448416 CGNL1Q0VF96 1302 aa11.93□□□□□ -0.5
SYNPO2-204ENST00000448416 MSNP26038 577 aaKnown RBP11.93□□□□□ -0.5
SYNPO2-204ENST00000448416 SLFN5Q08AF3 891 aa11.93□□□□□ -0.5
SYNPO2-204ENST00000448416 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.93□□□□□ -0.5
SYNPO2-204ENST00000448416 RIPK4P57078 832 aa11.93□□□□□ -0.5
SYNPO2-204ENST00000448416 GAS2L3Q86XJ1 694 aa11.93□□□□□ -0.5
SYNPO2-204ENST00000448416 CLUAP1Q96AJ1 413 aa11.93□□□□□ -0.5
SYNPO2-204ENST00000448416 SAMD9Q5K651 1589 aa11.93□□□□□ -0.5
SYNPO2-204ENST00000448416 FGD1P98174 961 aa11.93□□□□□ -0.5
SYNPO2-204ENST00000448416 ZSCAN30Q86W11 494 aa11.92□□□□□ -0.5
SYNPO2-204ENST00000448416 CANXP27824 592 aaKnown RBP11.92□□□□□ -0.5
SYNPO2-204ENST00000448416 ANP32BQ92688 251 aaKnown RBP11.92□□□□□ -0.5
SYNPO2-204ENST00000448416 PANK3Q9H999 370 aa11.92□□□□□ -0.5
SYNPO2-204ENST00000448416 ZNF644Q9H582 1327 aaPredicted RBP11.92□□□□□ -0.5
SYNPO2-204ENST00000448416 RAD54L2Q9Y4B4 1467 aa11.91□□□□□ -0.5
SYNPO2-204ENST00000448416 CUL7Q14999 1698 aa11.91□□□□□ -0.5
SYNPO2-204ENST00000448416 ZNF521Q96K83 1311 aa11.91□□□□□ -0.5
SYNPO2-204ENST00000448416 CCDC173Q0VFZ6 552 aa11.91□□□□□ -0.5
SYNPO2-204ENST00000448416 COG6Q9Y2V7 657 aa11.91□□□□□ -0.5
SYNPO2-204ENST00000448416 CC2D2AQ9P2K1 1620 aa11.91□□□□□ -0.5
SYNPO2-204ENST00000448416 PRDM2Q13029 1718 aa11.91□□□□□ -0.5
SYNPO2-204ENST00000448416 R3HCC1Q9Y3T6 440 aaKnown RBP11.91□□□□□ -0.5
SYNPO2-204ENST00000448416 SLC24A1O60721 1099 aa11.9□□□□□ -0.5
SYNPO2-204ENST00000448416 TERF1P54274 439 aa11.9□□□□□ -0.5
SYNPO2-204ENST00000448416 ARID3AQ99856 593 aa11.9□□□□□ -0.5
SYNPO2-204ENST00000448416 ZNF608Q9ULD9 1512 aaPredicted RBP11.89□□□□□ -0.51
SYNPO2-204ENST00000448416 HSCBQ8IWL3 235 aa11.89□□□□□ -0.51
SYNPO2-204ENST00000448416 SMAP1Q8IYB5 467 aaPredicted RBP11.89□□□□□ -0.51
SYNPO2-204ENST00000448416 PDE3AQ14432 1141 aa11.89□□□□□ -0.51
SYNPO2-204ENST00000448416 C22orf23Q9BZE7 217 aa11.89□□□□□ -0.51
SYNPO2-204ENST00000448416 PANK1Q8TE04 598 aa11.89□□□□□ -0.51
SYNPO2-204ENST00000448416 DNMT1P26358 1616 aaKnown RBP11.88□□□□□ -0.51
SYNPO2-204ENST00000448416 SKOR2Q2VWA4 1001 aaPredicted RBP11.88□□□□□ -0.51
SYNPO2-204ENST00000448416 PMFBP1Q8TBY8 1022 aa11.88□□□□□ -0.51
SYNPO2-204ENST00000448416 NASPP49321 788 aaPredicted RBP11.88□□□□□ -0.51
SYNPO2-204ENST00000448416 MFAP1P55081 439 aaKnown RBP11.88□□□□□ -0.51
SYNPO2-204ENST00000448416 NKTRP30414 1462 aaKnown RBP11.87□□□□□ -0.51
SYNPO2-204ENST00000448416 GBP4Q96PP9 640 aa11.87□□□□□ -0.51
SYNPO2-204ENST00000448416 PDZRN3Q9UPQ7 1066 aa11.87□□□□□ -0.51
SYNPO2-204ENST00000448416 EPRSP07814 1512 aaKnown RBP11.87□□□□□ -0.51
SYNPO2-204ENST00000448416 ABCA10Q8WWZ4 1543 aa11.87□□□□□ -0.51
SYNPO2-204ENST00000448416 PPP1R9BQ96SB3 815 aa11.87□□□□□ -0.51
SYNPO2-204ENST00000448416 SPINK5Q9NQ38 1064 aaPredicted RBP11.87□□□□□ -0.51
SYNPO2-204ENST00000448416 ZHX1Q9UKY1 873 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms