RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 ZMYM3Q14202 1370 aa37.31■■■■□ 3.56
MRPL28-205ENST00000447696 NPATQ14207 1427 aa37.3■■■■□ 3.56
MRPL28-205ENST00000447696 FAM135AQ9P2D6 1515 aa37.3■■■■□ 3.56
MRPL28-205ENST00000447696 KIF3BO15066 747 aa37.29■■■■□ 3.56
MRPL28-205ENST00000447696 ILDR2Q71H61 639 aa37.29■■■■□ 3.56
MRPL28-205ENST00000447696 ABCC5O15440 1437 aa37.27■■■■□ 3.56
MRPL28-205ENST00000447696 CROCC2H7BZ55 1655 aa37.26■■■■□ 3.56
MRPL28-205ENST00000447696 NCOA1Q15788 1441 aa37.25■■■■□ 3.55
MRPL28-205ENST00000447696 DNMT1P26358 1616 aaKnown RBP37.25■■■■□ 3.55
MRPL28-205ENST00000447696 DAPK1P53355 1430 aa37.23■■■■□ 3.55
MRPL28-205ENST00000447696 LTBP4Q8N2S1 1624 aa37.22■■■■□ 3.55
MRPL28-205ENST00000447696 EIF2AK4Q9P2K8 1649 aaKnown RBP37.21■■■■□ 3.55
MRPL28-205ENST00000447696 KDM5DQ9BY66 1539 aa37.2■■■■□ 3.55
MRPL28-205ENST00000447696 DUOX2Q9NRD8 1548 aa37.19■■■■□ 3.54
MRPL28-205ENST00000447696 RNF17Q9BXT8 1623 aaKnown RBP37.18■■■■□ 3.54
MRPL28-205ENST00000447696 PTPRKQ15262 1439 aa37.17■■■■□ 3.54
MRPL28-205ENST00000447696 SPATA31D1Q6ZQQ2 1576 aa37.15■■■■□ 3.54
MRPL28-205ENST00000447696 KIF15Q9NS87 1388 aa37.14■■■■□ 3.54
MRPL28-205ENST00000447696 WASHC2CQ9Y4E1 1318 aa37.1■■■■□ 3.53
MRPL28-205ENST00000447696 ERBINQ96RT1 1412 aa37.09■■■■□ 3.53
MRPL28-205ENST00000447696 CAMSAP1Q5T5Y3 1602 aa37.08■■■■□ 3.53
MRPL28-205ENST00000447696 PZPP20742 1482 aa37.07■■■■□ 3.52
MRPL28-205ENST00000447696 ANKRD30AQ9BXX3 1397 aa37.06■■■■□ 3.52
MRPL28-205ENST00000447696 MYO3AQ8NEV4 1616 aa37.04■■■■□ 3.52
MRPL28-205ENST00000447696 PKD2Q13563 968 aa37.04■■■■□ 3.52
MRPL28-205ENST00000447696 RRP7BPQ9NSQ0 103 aa37.04■■■■□ 3.52
MRPL28-205ENST00000447696 ZC3H13Q5T200 1668 aaKnown RBP37.04■■■■□ 3.52
MRPL28-205ENST00000447696 MROH1Q8NDA8 1641 aa37.03■■■■□ 3.52
MRPL28-205ENST00000447696 FAM50AQ14320 339 aaKnown RBP37.03■■■■□ 3.52
MRPL28-205ENST00000447696 ZNF142P52746 1687 aaPredicted RBP37.02■■■■□ 3.52
MRPL28-205ENST00000447696 ADGRL2O95490 1459 aa37.01■■■■□ 3.52
MRPL28-205ENST00000447696 ABCC3O15438 1527 aa37.01■■■■□ 3.52
MRPL28-205ENST00000447696 PLA2R1Q13018 1463 aa36.99■■■■□ 3.51
MRPL28-205ENST00000447696 CHIC2Q9UKJ5 165 aa36.97■■■■□ 3.51
MRPL28-205ENST00000447696 CEP170BQ9Y4F5 1589 aaPredicted RBP36.96■■■■□ 3.51
MRPL28-205ENST00000447696 PRDM15P57071 1507 aaPredicted RBP36.96■■■■□ 3.51
MRPL28-205ENST00000447696 NCKAP5LQ9HCH0 1330 aa36.96■■■■□ 3.51
MRPL28-205ENST00000447696 TNRQ92752 1358 aa36.94■■■■□ 3.5
MRPL28-205ENST00000447696 ZNF335Q9H4Z2 1342 aaPredicted RBP36.92■■■■□ 3.5
MRPL28-205ENST00000447696 UBAP1LF5GYI3 381 aa36.92■■■■□ 3.5
MRPL28-205ENST00000447696 DEPDC5O75140 1603 aa36.92■■■■□ 3.5
MRPL28-205ENST00000447696 A2ML1A8K2U0 1454 aa36.91■■■■□ 3.5
MRPL28-205ENST00000447696 FBXO31Q5XUX0 539 aaPredicted RBP36.91■■■■□ 3.5
MRPL28-205ENST00000447696 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.87■■■■□ 3.49
MRPL28-205ENST00000447696 CEP152O94986 1710 aa36.85■■■■□ 3.49
MRPL28-205ENST00000447696 PPARGC1BQ86YN6 1023 aaKnown RBP36.84■■■■□ 3.49
MRPL28-205ENST00000447696 NLRP1Q9C000 1473 aa36.83■■■■□ 3.49
MRPL28-205ENST00000447696 KANK1Q14678 1352 aa36.82■■■■□ 3.49
MRPL28-205ENST00000447696 ARHGAP31Q2M1Z3 1444 aa36.81■■■■□ 3.48
MRPL28-205ENST00000447696 ERVK-7P63135 1459 aa36.8■■■■□ 3.48
MRPL28-205ENST00000447696 ANKRD50Q9ULJ7 1429 aa36.79■■■■□ 3.48
MRPL28-205ENST00000447696 ROCK1Q13464 1354 aa36.78■■■■□ 3.48
MRPL28-205ENST00000447696 VWDEQ8N2E2 1590 aa36.78■■■■□ 3.48
MRPL28-205ENST00000447696 LMTK2Q8IWU2 1503 aa36.76■■■■□ 3.48
MRPL28-205ENST00000447696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.76■■■■□ 3.488e-6■□□□□ 8.2
MRPL28-205ENST00000447696 RRBP1Q9P2E9 1410 aaKnown RBP36.69■■■■□ 3.46
MRPL28-205ENST00000447696 UGGT1Q9NYU2 1555 aa36.68■■■■□ 3.46
MRPL28-205ENST00000447696 THEMISQ8N1K5 641 aaPredicted RBP36.65■■■■□ 3.46
MRPL28-205ENST00000447696 TOM1O60784 492 aa36.64■■■■□ 3.46
MRPL28-205ENST00000447696 CPS1P31327 1500 aa36.62■■■■□ 3.45
MRPL28-205ENST00000447696 EFCAB6Q5THR3 1501 aa36.62■■■■□ 3.45
MRPL28-205ENST00000447696 UNC13BO14795 1591 aa36.6■■■■□ 3.45
MRPL28-205ENST00000447696 ITGAEP38570 1179 aa36.59■■■■□ 3.45
MRPL28-205ENST00000447696 POLR1AO95602 1720 aaPredicted RBP36.58■■■■□ 3.45
MRPL28-205ENST00000447696 CFAP65Q6ZU64 1925 aaKnown RBP36.56■■■■□ 3.44
MRPL28-205ENST00000447696 NEURL4Q96JN8 1562 aa36.54■■■■□ 3.44
MRPL28-205ENST00000447696 ANKLE2Q86XL3 938 aa36.54■■■■□ 3.44
MRPL28-205ENST00000447696 RPRD2Q5VT52 1461 aaKnown RBP36.54■■■■□ 3.44
MRPL28-205ENST00000447696 SCAF1Q9H7N4 1312 aaKnown RBP36.54■■■■□ 3.44
MRPL28-205ENST00000447696 HSPA1LP34931 641 aa36.52■■■■□ 3.44
MRPL28-205ENST00000447696 TET3O43151 1660 aa36.51■■■■□ 3.44
MRPL28-205ENST00000447696 UBR1Q8IWV7 1749 aa36.51■■■■□ 3.44
MRPL28-205ENST00000447696 NOS1P29475 1434 aa36.51■■■■□ 3.43
MRPL28-205ENST00000447696 PIP4K2BP78356 416 aa36.49■■■■□ 3.43
MRPL28-205ENST00000447696 MED14O60244 1454 aa36.48■■■■□ 3.43
MRPL28-205ENST00000447696 SYNMO15061 1565 aa36.46■■■■□ 3.43
MRPL28-205ENST00000447696 GCC2Q8IWJ2 1684 aa36.45■■■■□ 3.43
MRPL28-205ENST00000447696 IQGAP3Q86VI3 1631 aa36.45■■■■□ 3.42
MRPL28-205ENST00000447696 KDM5AP29375 1690 aaKnown RBP36.43■■■■□ 3.42
MRPL28-205ENST00000447696 PIK3C2BO00750 1634 aa36.43■■■■□ 3.42
MRPL28-205ENST00000447696 MED1Q15648 1581 aaPredicted RBP36.43■■■■□ 3.42
MRPL28-205ENST00000447696 SLIT1O75093 1534 aa36.42■■■■□ 3.42
MRPL28-205ENST00000447696 NPHP4O75161 1426 aaPredicted RBP36.42■■■■□ 3.42
MRPL28-205ENST00000447696 ARHGAP23Q9P227 1491 aa36.41■■■■□ 3.42
MRPL28-205ENST00000447696 SLC52A1Q9NWF4 448 aa36.38■■■■□ 3.41
MRPL28-205ENST00000447696 NUP155O75694 1391 aa36.38■■■■□ 3.41
MRPL28-205ENST00000447696 IDI1Q13907 227 aa36.37■■■■□ 3.41
MRPL28-205ENST00000447696 SCAF11Q99590 1463 aaKnown RBP36.36■■■■□ 3.41
MRPL28-205ENST00000447696 IQGAP1P46940 1657 aa36.35■■■■□ 3.41
MRPL28-205ENST00000447696 NAIPQ13075 1403 aa36.34■■■■□ 3.41
MRPL28-205ENST00000447696 STAG3Q9UJ98 1225 aa36.33■■■■□ 3.41
MRPL28-205ENST00000447696 TMEM2Q9UHN6 1383 aa36.32■■■■□ 3.4
MRPL28-205ENST00000447696 ADGRB3O60242 1522 aa36.32■■■■□ 3.4
MRPL28-205ENST00000447696 E9PCH4 1651 aa36.32■■■■□ 3.4
MRPL28-205ENST00000447696 HFM1A2PYH4 1435 aa36.29■■■■□ 3.4
MRPL28-205ENST00000447696 PHF23Q9BUL5 403 aaPredicted RBP36.29■■■■□ 3.4
MRPL28-205ENST00000447696 TXNDC2Q86VQ3 553 aa36.27■■■■□ 3.4
MRPL28-205ENST00000447696 EID1Q9Y6B2 187 aa36.27■■■■□ 3.4
MRPL28-205ENST00000447696 LTKP29376 864 aa36.26■■■■□ 3.4
MRPL28-205ENST00000447696 ALKQ9UM73 1620 aa36.17■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms