RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 GPCPD1Q9NPB8 672 aa11.41□□□□□ -0.58
COL11A1-205ENST00000447608 SSTR3P32745 418 aaPredicted RBP11.4□□□□□ -0.58
COL11A1-205ENST00000447608 EN1Q05925 392 aaPredicted RBP11.4□□□□□ -0.58
COL11A1-205ENST00000447608 SKIV2LQ15477 1246 aaKnown RBP11.4□□□□□ -0.58
COL11A1-205ENST00000447608 PTCD2Q8WV60 388 aaKnown RBP11.4□□□□□ -0.58
COL11A1-205ENST00000447608 CLCN6P51797 869 aa11.39□□□□□ -0.59
COL11A1-205ENST00000447608 MAP3K7O43318 606 aa11.38□□□□□ -0.59
COL11A1-205ENST00000447608 RBM33Q96EV2 1170 aaKnown RBP11.38□□□□□ -0.59
COL11A1-205ENST00000447608 PDIA4P13667 645 aaKnown RBP11.37□□□□□ -0.59
COL11A1-205ENST00000447608 PROCA1Q8NCQ7 364 aaPredicted RBP11.37□□□□□ -0.59
COL11A1-205ENST00000447608 EPAS1Q99814 870 aa11.37□□□□□ -0.59
COL11A1-205ENST00000447608 PHF14O94880 888 aa11.36□□□□□ -0.59
COL11A1-205ENST00000447608 EVX2Q03828 476 aa11.36□□□□□ -0.59
COL11A1-205ENST00000447608 POTEHQ6S545 545 aa11.36□□□□□ -0.59
COL11A1-205ENST00000447608 BEGAINQ9BUH8 593 aa11.36□□□□□ -0.59
COL11A1-205ENST00000447608 ZNF777Q9ULD5 760 aaPredicted RBP11.36□□□□□ -0.59
COL11A1-205ENST00000447608 ATP1B4Q9UN42 357 aaPredicted RBP11.36□□□□□ -0.59
COL11A1-205ENST00000447608 RANGAP1P46060 587 aaPredicted RBP11.35□□□□□ -0.59
COL11A1-205ENST00000447608 TSR1Q2NL82 804 aaKnown RBP11.34□□□□□ -0.59
COL11A1-205ENST00000447608 FAM161AQ3B820 660 aa11.34□□□□□ -0.59
COL11A1-205ENST00000447608 PROSER2Q86WR7 435 aaPredicted RBP11.34□□□□□ -0.59
COL11A1-205ENST00000447608 POM121Q96HA1 1249 aa11.34□□□□□ -0.59
COL11A1-205ENST00000447608 POLR3EQ9NVU0 708 aa11.34□□□□□ -0.59
COL11A1-205ENST00000447608 COLQQ9Y215 455 aaPredicted RBP11.34□□□□□ -0.59
COL11A1-205ENST00000447608 HAX1O00165 279 aa11.33□□□□□ -0.6
COL11A1-205ENST00000447608 SEC24BO95487 1268 aa11.33□□□□□ -0.6
COL11A1-205ENST00000447608 NLRP7Q8WX94 980 aa11.32□□□□□ -0.6
COL11A1-205ENST00000447608 FAM217BQ9NTX9 383 aaPredicted RBP11.32□□□□□ -0.6
COL11A1-205ENST00000447608 PCDHGA10Q9Y5H3 936 aa11.32□□□□□ -0.6
COL11A1-205ENST00000447608 SLC34A2O95436 690 aa11.31□□□□□ -0.6
COL11A1-205ENST00000447608 FNBP4Q8N3X1 1017 aaPredicted RBP11.31□□□□□ -0.6
COL11A1-205ENST00000447608 SLAIN1Q8ND83 568 aa11.3□□□□□ -0.6
COL11A1-205ENST00000447608 RAD21O60216 631 aa11.29□□□□□ -0.6
COL11A1-205ENST00000447608 METTL3Q86U44 580 aaKnown RBP11.29□□□□□ -0.6
COL11A1-205ENST00000447608 MYSM1Q5VVJ2 828 aa11.28□□□□□ -0.6
COL11A1-205ENST00000447608 TYW1BQ6NUM6 668 aa11.28□□□□□ -0.6
COL11A1-205ENST00000447608 PELP1Q8IZL8 1130 aaKnown RBP11.28□□□□□ -0.6
COL11A1-205ENST00000447608 ZBTB7CA1YPR0 619 aa11.27□□□□□ -0.61
COL11A1-205ENST00000447608 OATP04181 439 aa11.27□□□□□ -0.61
COL11A1-205ENST00000447608 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.27□□□□□ -0.61
COL11A1-205ENST00000447608 NECTIN2Q92692 538 aa11.26□□□□□ -0.61
COL11A1-205ENST00000447608 NPM2Q86SE8 214 aaKnown RBP11.25□□□□□ -0.61
COL11A1-205ENST00000447608 PXYLP1Q8TE99 480 aa11.24□□□□□ -0.61
COL11A1-205ENST00000447608 SPDYE5A6NIY4 337 aa11.23□□□□□ -0.61
COL11A1-205ENST00000447608 PADI6Q6TGC4 694 aa11.23□□□□□ -0.61
COL11A1-205ENST00000447608 C3orf67Q6ZVT6 689 aa11.23□□□□□ -0.61
COL11A1-205ENST00000447608 CCDC97Q96F63 343 aaPredicted RBP11.23□□□□□ -0.61
COL11A1-205ENST00000447608 SERPINA10Q9UK55 444 aa11.23□□□□□ -0.61
COL11A1-205ENST00000447608 COG6Q9Y2V7 657 aa11.23□□□□□ -0.61
COL11A1-205ENST00000447608 ADGRG1Q9Y653 693 aa11.23□□□□□ -0.61
COL11A1-205ENST00000447608 POTEFA5A3E0 1075 aa11.22□□□□□ -0.61
COL11A1-205ENST00000447608 CLK2P49760 499 aaKnown RBP11.22□□□□□ -0.61
COL11A1-205ENST00000447608 FBXW7Q969H0 707 aa11.22□□□□□ -0.61
COL11A1-205ENST00000447608 SNRKQ9NRH2 765 aa11.22□□□□□ -0.61
COL11A1-205ENST00000447608 TBC1D2Q9BYX2 928 aa11.21□□□□□ -0.61
COL11A1-205ENST00000447608 PCDHGA4Q9Y5G9 962 aa11.21□□□□□ -0.61
COL11A1-205ENST00000447608 RFC5P40937 340 aa11.2□□□□□ -0.62
COL11A1-205ENST00000447608 FBXO31Q5XUX0 539 aaPredicted RBP11.2□□□□□ -0.62
COL11A1-205ENST00000447608 JPH4Q96JJ6 628 aa11.2□□□□□ -0.62
COL11A1-205ENST00000447608 C6orf132Q5T0Z8 1188 aa11.19□□□□□ -0.62
COL11A1-205ENST00000447608 BANK1Q8NDB2 785 aa11.19□□□□□ -0.62
COL11A1-205ENST00000447608 CERKQ8TCT0 537 aa11.18□□□□□ -0.62
COL11A1-205ENST00000447608 TTC13Q8NBP0 860 aa11.17□□□□□ -0.62
COL11A1-205ENST00000447608 ZNF330Q9Y3S2 320 aaPredicted RBP11.17□□□□□ -0.62
COL11A1-205ENST00000447608 KDM4FA0A1W2PPD8 638 aa11.16□□□□□ -0.62
COL11A1-205ENST00000447608 FOSBP53539 338 aa11.16□□□□□ -0.62
COL11A1-205ENST00000447608 SLC39A7Q92504 469 aa11.16□□□□□ -0.62
COL11A1-205ENST00000447608 PLSCR2Q9NRY7 297 aa11.16□□□□□ -0.62
COL11A1-205ENST00000447608 LIMD1Q9UGP4 676 aa11.16□□□□□ -0.62
COL11A1-205ENST00000447608 CCDC9Q9Y3X0 531 aaKnown RBP11.16□□□□□ -0.62
COL11A1-205ENST00000447608 GABBR2O75899 941 aa11.15□□□□□ -0.62
COL11A1-205ENST00000447608 DIXDC1Q155Q3 683 aa11.15□□□□□ -0.62
COL11A1-205ENST00000447608 DCBLD2Q96PD2 775 aa11.15□□□□□ -0.62
COL11A1-205ENST00000447608 TRAIPQ9BWF2 469 aa11.15□□□□□ -0.62
COL11A1-205ENST00000447608 TMEM259Q4ZIN3 620 aa11.14□□□□□ -0.63
COL11A1-205ENST00000447608 C7P10643 843 aa11.13□□□□□ -0.63
COL11A1-205ENST00000447608 RIC3Q7Z5B4 369 aa11.13□□□□□ -0.63
COL11A1-205ENST00000447608 RBM27Q9P2N5 1060 aaKnown RBP11.13□□□□□ -0.63
COL11A1-205ENST00000447608 PPP2R2DQ66LE6 453 aa11.12□□□□□ -0.63
COL11A1-205ENST00000447608 ZDHHC16Q969W1 377 aa11.12□□□□□ -0.63
COL11A1-205ENST00000447608 ZNF454Q8N9F8 522 aa11.11□□□□□ -0.63
COL11A1-205ENST00000447608 RBM46Q8TBY0 533 aaKnown RBP11.11□□□□□ -0.63
COL11A1-205ENST00000447608 SPIRE2Q8WWL2 714 aa11.11□□□□□ -0.63
COL11A1-205ENST00000447608 GDPD2Q9HCC8 539 aa11.11□□□□□ -0.63
COL11A1-205ENST00000447608 PRSS12P56730 875 aa11.1□□□□□ -0.63
COL11A1-205ENST00000447608 METRNQ9UJH8 293 aa11.1□□□□□ -0.63
COL11A1-205ENST00000447608 MTMR14Q8NCE2 650 aa11.09□□□□□ -0.63
COL11A1-205ENST00000447608 CDCA7LQ96GN5 454 aa11.09□□□□□ -0.63
COL11A1-205ENST00000447608 ADAM33Q9BZ11 813 aa11.09□□□□□ -0.63
COL11A1-205ENST00000447608 RETREG2Q8NC44 543 aa11.07□□□□□ -0.64
COL11A1-205ENST00000447608 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.07□□□□□ -0.64
COL11A1-205ENST00000447608 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.06□□□□□ -0.64
COL11A1-205ENST00000447608 SPTLC1O15269 473 aa11.06□□□□□ -0.64
COL11A1-205ENST00000447608 CSPP1Q1MSJ5 1256 aa11.06□□□□□ -0.64
COL11A1-205ENST00000447608 AEBP1Q8IUX7 1158 aa11.06□□□□□ -0.64
COL11A1-205ENST00000447608 KCTD17Q8N5Z5 321 aa11.06□□□□□ -0.64
COL11A1-205ENST00000447608 RCCD1A6NED2 376 aa11.05□□□□□ -0.64
COL11A1-205ENST00000447608 CD46P15529 392 aa11.05□□□□□ -0.64
COL11A1-205ENST00000447608 TUSC1Q2TAM9 212 aa11.05□□□□□ -0.64
COL11A1-205ENST00000447608 FAM198AQ9UFP1 575 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms