RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 ZNF326Q5BKZ1 582 aaKnown RBP24.54■■□□□ 1.52
SMC6-206ENST00000446852 CFAP74Q9C0B2 1584 aa24.53■■□□□ 1.52
SMC6-206ENST00000446852 KIDINS220Q9ULH0 1771 aa24.53■■□□□ 1.52
SMC6-206ENST00000446852 CD109Q6YHK3 1445 aa24.52■■□□□ 1.52
SMC6-206ENST00000446852 E9PCH4 1651 aa24.52■■□□□ 1.52
SMC6-206ENST00000446852 RALGAPBQ86X10 1494 aa24.52■■□□□ 1.52
SMC6-206ENST00000446852 C11orf95C9JLR9 678 aaPredicted RBP24.51■■□□□ 1.51
SMC6-206ENST00000446852 ATP10AO60312 1499 aa24.51■■□□□ 1.51
SMC6-206ENST00000446852 KDM5CP41229 1560 aa24.51■■□□□ 1.51
SMC6-206ENST00000446852 EIF2AK4Q9P2K8 1649 aaKnown RBP24.49■■□□□ 1.51
SMC6-206ENST00000446852 ZNF518AQ6AHZ1 1483 aa24.48■■□□□ 1.51
SMC6-206ENST00000446852 CCDC7Q96M83 1385 aa24.48■■□□□ 1.51
SMC6-206ENST00000446852 ANP32CO43423 234 aa24.47■■□□□ 1.51
SMC6-206ENST00000446852 DCAF11Q8TEB1 546 aa24.46■■□□□ 1.51
SMC6-206ENST00000446852 USP47Q96K76 1375 aa24.46■■□□□ 1.51
SMC6-206ENST00000446852 VWDEQ8N2E2 1590 aa24.45■■□□□ 1.51
SMC6-206ENST00000446852 BCORL1Q5H9F3 1711 aa24.45■■□□□ 1.51
SMC6-206ENST00000446852 RIMBP3CA6NJZ7 1639 aa24.45■■□□□ 1.5
SMC6-206ENST00000446852 RIMBP3BA6NNM3 1639 aa24.45■■□□□ 1.5
SMC6-206ENST00000446852 MROH1Q8NDA8 1641 aa24.45■■□□□ 1.5
SMC6-206ENST00000446852 RIMBP3Q9UFD9 1639 aa24.45■■□□□ 1.5
SMC6-206ENST00000446852 TET3O43151 1660 aa24.45■■□□□ 1.5
SMC6-206ENST00000446852 KDM2AQ9Y2K7 1162 aa24.45■■□□□ 1.5
SMC6-206ENST00000446852 A2MP01023 1474 aa24.43■■□□□ 1.5
SMC6-206ENST00000446852 POGZQ7Z3K3 1410 aa24.43■■□□□ 1.5
SMC6-206ENST00000446852 DHX29Q7Z478 1369 aaKnown RBP24.43■■□□□ 1.5
SMC6-206ENST00000446852 MYT1LQ9UL68 1186 aa24.43■■□□□ 1.5
SMC6-206ENST00000446852 SPHKAPQ2M3C7 1700 aa24.43■■□□□ 1.5
SMC6-206ENST00000446852 TRPM1Q7Z4N2 1603 aa24.43■■□□□ 1.5
SMC6-206ENST00000446852 PRDM15P57071 1507 aaPredicted RBP24.43■■□□□ 1.5
SMC6-206ENST00000446852 CNTLNQ9NXG0 1405 aa24.42■■□□□ 1.5
SMC6-206ENST00000446852 GTF3C3Q9Y5Q9 886 aa24.42■■□□□ 1.5
SMC6-206ENST00000446852 KIF7Q2M1P5 1343 aa24.4■■□□□ 1.5
SMC6-206ENST00000446852 CCER2I3L3R5 266 aa24.4■■□□□ 1.5
SMC6-206ENST00000446852 PRAG1Q86YV5 1406 aa24.4■■□□□ 1.5
SMC6-206ENST00000446852 TRPM2O94759 1503 aa24.39■■□□□ 1.49
SMC6-206ENST00000446852 RGL3Q3MIN7 710 aa24.38■■□□□ 1.49
SMC6-206ENST00000446852 HECW2Q9P2P5 1572 aa24.38■■□□□ 1.49
SMC6-206ENST00000446852 MAP3K4Q9Y6R4 1608 aa24.38■■□□□ 1.49
SMC6-206ENST00000446852 KIF3BO15066 747 aa24.38■■□□□ 1.49
SMC6-206ENST00000446852 CYB5RLQ6IPT4 315 aa24.38■■□□□ 1.49
SMC6-206ENST00000446852 CEP152O94986 1710 aa24.37■■□□□ 1.49
SMC6-206ENST00000446852 NEO1Q92859 1461 aa24.36■■□□□ 1.49
SMC6-206ENST00000446852 CARD11Q9BXL7 1154 aa24.36■■□□□ 1.49
SMC6-206ENST00000446852 MLH3Q9UHC1 1453 aa24.35■■□□□ 1.49
SMC6-206ENST00000446852 KANK1Q14678 1352 aa24.35■■□□□ 1.49
SMC6-206ENST00000446852 PTPRTO14522 1441 aa24.34■■□□□ 1.49
SMC6-206ENST00000446852 CLTCL1P53675 1640 aa24.34■■□□□ 1.49
SMC6-206ENST00000446852 FRMPD1Q5SYB0 1578 aa24.34■■□□□ 1.49
SMC6-206ENST00000446852 RNF17Q9BXT8 1623 aaKnown RBP24.34■■□□□ 1.49
SMC6-206ENST00000446852 ABCA6Q8N139 1617 aa24.33■■□□□ 1.49
SMC6-206ENST00000446852 ROCK2O75116 1388 aaKnown RBP24.31■■□□□ 1.48
SMC6-206ENST00000446852 GLI2P10070 1586 aa24.29■■□□□ 1.48
SMC6-206ENST00000446852 EFCAB6Q5THR3 1501 aa24.29■■□□□ 1.48
SMC6-206ENST00000446852 RICTORQ6R327 1708 aa24.29■■□□□ 1.48
SMC6-206ENST00000446852 PPRC1Q5VV67 1664 aaKnown RBP24.29■■□□□ 1.48
SMC6-206ENST00000446852 LAMC1P11047 1609 aa24.28■■□□□ 1.48
SMC6-206ENST00000446852 GPRASP1Q5JY77 1395 aa24.25■■□□□ 1.47
SMC6-206ENST00000446852 LMTK2Q8IWU2 1503 aa24.25■■□□□ 1.47
SMC6-206ENST00000446852 RAPGEF3O95398 923 aa24.24■■□□□ 1.47
SMC6-206ENST00000446852 ST20-MTHFSA0A0A6YYL1 179 aa24.24■■□□□ 1.47
SMC6-206ENST00000446852 NBPF1Q3BBV0 1214 aa24.24■■□□□ 1.47
SMC6-206ENST00000446852 MADDQ8WXG6 1647 aa24.24■■□□□ 1.47
SMC6-206ENST00000446852 ARID4BQ4LE39 1312 aaPredicted RBP24.23■■□□□ 1.47
SMC6-206ENST00000446852 DIP2BQ9P265 1576 aa24.23■■□□□ 1.47
SMC6-206ENST00000446852 DIP2CQ9Y2E4 1556 aa24.22■■□□□ 1.47
SMC6-206ENST00000446852 UGGT1Q9NYU2 1555 aa24.21■■□□□ 1.47
SMC6-206ENST00000446852 KIF1BO60333 1816 aa24.18■■□□□ 1.46
SMC6-206ENST00000446852 PRKRIP1Q9H875 184 aaPredicted RBP24.18■■□□□ 1.46
SMC6-206ENST00000446852 NEURL4Q96JN8 1562 aa24.18■■□□□ 1.46
SMC6-206ENST00000446852 POLR3GLQ9BT43 218 aa24.17■■□□□ 1.46
SMC6-206ENST00000446852 CFAP65Q6ZU64 1925 aaKnown RBP24.16■■□□□ 1.46
SMC6-206ENST00000446852 TSPOAP1O95153 1857 aa24.15■■□□□ 1.46
SMC6-206ENST00000446852 MROH2AA6NES4 1674 aa24.15■■□□□ 1.46
SMC6-206ENST00000446852 ABCC3O15438 1527 aa24.13■■□□□ 1.45
SMC6-206ENST00000446852 IFT172Q9UG01 1749 aa24.13■■□□□ 1.45
SMC6-206ENST00000446852 FAM69CQ0P6D2 419 aa24.12■■□□□ 1.45
SMC6-206ENST00000446852 GGT6Q6P531 493 aa24.12■■□□□ 1.45
SMC6-206ENST00000446852 IQGAP1P46940 1657 aa24.12■■□□□ 1.45
SMC6-206ENST00000446852 NPATQ14207 1427 aa24.11■■□□□ 1.45
SMC6-206ENST00000446852 CAMSAP1Q5T5Y3 1602 aa24.11■■□□□ 1.45
SMC6-206ENST00000446852 YEATS2Q9ULM3 1422 aa24.11■■□□□ 1.45
SMC6-206ENST00000446852 CCDC184Q52MB2 194 aa24.1■■□□□ 1.45
SMC6-206ENST00000446852 SIGLEC1Q9BZZ2 1709 aa24.07■■□□□ 1.44
SMC6-206ENST00000446852 ZMYM4Q5VZL5 1548 aa24.07■■□□□ 1.44
SMC6-206ENST00000446852 COL17A1Q9UMD9 1497 aaPredicted RBP24.07■■□□□ 1.44
SMC6-206ENST00000446852 KIAA1210Q9ULL0 1709 aa24.07■■□□□ 1.44
SMC6-206ENST00000446852 STAC3Q96MF2 364 aa24.06■■□□□ 1.44
SMC6-206ENST00000446852 TESK2Q96S53 571 aa24.06■■□□□ 1.44
SMC6-206ENST00000446852 ADGRB3O60242 1522 aa24.05■■□□□ 1.44
SMC6-206ENST00000446852 MYOM2P54296 1465 aa24.04■■□□□ 1.44
SMC6-206ENST00000446852 WASHC2CQ9Y4E1 1318 aa24.04■■□□□ 1.44
SMC6-206ENST00000446852 ZC3H13Q5T200 1668 aaKnown RBP24.03■■□□□ 1.44
SMC6-206ENST00000446852 DISP3Q9P2K9 1392 aa24.02■■□□□ 1.44
SMC6-206ENST00000446852 KIF13AQ9H1H9 1805 aa24.02■■□□□ 1.44
SMC6-206ENST00000446852 PPLO60437 1756 aa23.99■■□□□ 1.43
SMC6-206ENST00000446852 MRS2Q9HD23 443 aa23.99■■□□□ 1.43
SMC6-206ENST00000446852 SCAF11Q99590 1463 aaKnown RBP23.98■■□□□ 1.43
SMC6-206ENST00000446852 SYNMO15061 1565 aa23.97■■□□□ 1.43
SMC6-206ENST00000446852 PIK3C2BO00750 1634 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms