RNA–Protein interactions for RNA: ENST00000445470.6

CPA4-202, Transcript of carboxypeptidase A4, humanhuman

TSL 2 BASIC

Gene CPA4, Length 2,718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-202ENST00000445470 PTPRKQ15262 1439 aa12.8□□□□□ -0.36
CPA4-202ENST00000445470 CCNB3Q8WWL7 1395 aa12.79□□□□□ -0.36
CPA4-202ENST00000445470 CEP170BQ9Y4F5 1589 aaPredicted RBP12.79□□□□□ -0.36
CPA4-202ENST00000445470 TCOF1Q13428 1488 aaKnown RBP12.79□□□□□ -0.36
CPA4-202ENST00000445470 EHBP1L1Q8N3D4 1523 aa12.79□□□□□ -0.36
CPA4-202ENST00000445470 PKD2Q13563 968 aa12.79□□□□□ -0.36
CPA4-202ENST00000445470 SPATA31D1Q6ZQQ2 1576 aa12.78□□□□□ -0.36
CPA4-202ENST00000445470 PRKCSHP14314 528 aaPredicted RBP12.78□□□□□ -0.36
CPA4-202ENST00000445470 CFDP1Q9UEE9 299 aaPredicted RBP12.78□□□□□ -0.36
CPA4-202ENST00000445470 TIAM1Q13009 1591 aa12.78□□□□□ -0.36
CPA4-202ENST00000445470 HNRNPMP52272 730 aaKnown RBP eCLIP12.77□□□□□ -0.36
CPA4-202ENST00000445470 RBM19Q9Y4C8 960 aaKnown RBP12.77□□□□□ -0.37
CPA4-202ENST00000445470 ZNF777Q9ULD5 760 aaPredicted RBP12.76□□□□□ -0.37
CPA4-202ENST00000445470 MBD5Q9P267 1494 aa12.76□□□□□ -0.37
CPA4-202ENST00000445470 DISP3Q9P2K9 1392 aa12.76□□□□□ -0.37
CPA4-202ENST00000445470 MTUS2Q5JR59 1369 aa12.75□□□□□ -0.37
CPA4-202ENST00000445470 A2ML1A8K2U0 1454 aa12.75□□□□□ -0.37
CPA4-202ENST00000445470 SOCS7O14512 581 aa12.73□□□□□ -0.37
CPA4-202ENST00000445470 FKBP8Q14318 412 aa12.73□□□□□ -0.37
CPA4-202ENST00000445470 DHX29Q7Z478 1369 aaKnown RBP12.73□□□□□ -0.37
CPA4-202ENST00000445470 DNMT1P26358 1616 aaKnown RBP12.72□□□□□ -0.37
CPA4-202ENST00000445470 NCKAP5LQ9HCH0 1330 aa12.71□□□□□ -0.37
CPA4-202ENST00000445470 MSH5O43196 834 aa12.71□□□□□ -0.37
CPA4-202ENST00000445470 KDM5DQ9BY66 1539 aa12.71□□□□□ -0.37
CPA4-202ENST00000445470 RSPH4AQ5TD94 716 aa12.71□□□□□ -0.38
CPA4-202ENST00000445470 POLR1AO95602 1720 aaPredicted RBP12.71□□□□□ -0.38
CPA4-202ENST00000445470 PZPP20742 1482 aa12.7□□□□□ -0.38
CPA4-202ENST00000445470 CCDC141Q6ZP82 1450 aa12.7□□□□□ -0.38
CPA4-202ENST00000445470 ILDR2Q71H61 639 aa12.7□□□□□ -0.38
CPA4-202ENST00000445470 CPS1P31327 1500 aa12.69□□□□□ -0.38
CPA4-202ENST00000445470 ARHGEF5Q12774 1597 aa12.69□□□□□ -0.38
CPA4-202ENST00000445470 GGT6Q6P531 493 aa12.68□□□□□ -0.38
CPA4-202ENST00000445470 ZNF335Q9H4Z2 1342 aaPredicted RBP12.68□□□□□ -0.38
CPA4-202ENST00000445470 NEURL4Q96JN8 1562 aa12.67□□□□□ -0.38
CPA4-202ENST00000445470 CAMSAP2Q08AD1 1489 aa12.67□□□□□ -0.38
CPA4-202ENST00000445470 TNRQ92752 1358 aa12.66□□□□□ -0.38
CPA4-202ENST00000445470 NLRP1Q9C000 1473 aa12.66□□□□□ -0.38
CPA4-202ENST00000445470 DEPDC5O75140 1603 aa12.66□□□□□ -0.38
CPA4-202ENST00000445470 ITGAEP38570 1179 aa12.66□□□□□ -0.38
CPA4-202ENST00000445470 ZNF644Q9H582 1327 aaPredicted RBP12.66□□□□□ -0.38
CPA4-202ENST00000445470 NCOA2Q15596 1464 aa12.66□□□□□ -0.38
CPA4-202ENST00000445470 MAST1Q9Y2H9 1570 aa12.65□□□□□ -0.38
CPA4-202ENST00000445470 ZC3H13Q5T200 1668 aaKnown RBP12.65□□□□□ -0.38
CPA4-202ENST00000445470 RNF17Q9BXT8 1623 aaKnown RBP12.65□□□□□ -0.38
CPA4-202ENST00000445470 MED14O60244 1454 aa12.65□□□□□ -0.38
CPA4-202ENST00000445470 UBAP1LF5GYI3 381 aa12.64□□□□□ -0.39
CPA4-202ENST00000445470 EIF2AK4Q9P2K8 1649 aaKnown RBP12.64□□□□□ -0.39
CPA4-202ENST00000445470 SHANK2Q9UPX8 1470 aa12.63□□□□□ -0.39
CPA4-202ENST00000445470 VWDEQ8N2E2 1590 aa12.62□□□□□ -0.39
CPA4-202ENST00000445470 MIA2Q96PC5 1412 aa12.62□□□□□ -0.39
CPA4-202ENST00000445470 DHX57Q6P158 1386 aaKnown RBP12.62□□□□□ -0.39
CPA4-202ENST00000445470 KIF3BO15066 747 aa12.61□□□□□ -0.39
CPA4-202ENST00000445470 UGGT1Q9NYU2 1555 aa12.6□□□□□ -0.39
CPA4-202ENST00000445470 MAP3K1Q13233 1512 aa12.6□□□□□ -0.39
CPA4-202ENST00000445470 THEMISQ8N1K5 641 aaPredicted RBP12.6□□□□□ -0.39
CPA4-202ENST00000445470 WASHC2CQ9Y4E1 1318 aa12.59□□□□□ -0.39
CPA4-202ENST00000445470 ABCC3O15438 1527 aa12.59□□□□□ -0.39
CPA4-202ENST00000445470 ANKLE2Q86XL3 938 aa12.59□□□□□ -0.39
CPA4-202ENST00000445470 IQGAP1P46940 1657 aa12.58□□□□□ -0.4
CPA4-202ENST00000445470 NPHP4O75161 1426 aaPredicted RBP12.58□□□□□ -0.4
CPA4-202ENST00000445470 SYNMO15061 1565 aa12.58□□□□□ -0.4
CPA4-202ENST00000445470 TOM1O60784 492 aa12.57□□□□□ -0.4
CPA4-202ENST00000445470 FBXO31Q5XUX0 539 aaPredicted RBP12.57□□□□□ -0.4
CPA4-202ENST00000445470 LRRC9Q6ZRR7 1453 aa12.57□□□□□ -0.4
CPA4-202ENST00000445470 TSPY4P0CV99 314 aa12.57□□□□□ -0.4
CPA4-202ENST00000445470 TSPY10P0CW01 314 aa12.57□□□□□ -0.4
CPA4-202ENST00000445470 MED1Q15648 1581 aaPredicted RBP12.56□□□□□ -0.4
CPA4-202ENST00000445470 MROH1Q8NDA8 1641 aa12.56□□□□□ -0.4
CPA4-202ENST00000445470 ERVK-7P63135 1459 aa12.55□□□□□ -0.4
CPA4-202ENST00000445470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.55□□□□□ -0.4
CPA4-202ENST00000445470 VPS8Q8N3P4 1428 aa12.55□□□□□ -0.4
CPA4-202ENST00000445470 ALKQ9UM73 1620 aa12.54□□□□□ -0.4
CPA4-202ENST00000445470 DUOX2Q9NRD8 1548 aa12.54□□□□□ -0.4
CPA4-202ENST00000445470 NEFLP07196 543 aa12.53□□□□□ -0.4
CPA4-202ENST00000445470 UBR1Q8IWV7 1749 aa12.53□□□□□ -0.4
CPA4-202ENST00000445470 ARHGAP31Q2M1Z3 1444 aa12.53□□□□□ -0.4
CPA4-202ENST00000445470 PRDM15P57071 1507 aaPredicted RBP12.52□□□□□ -0.41
CPA4-202ENST00000445470 MYOM3Q5VTT5 1437 aa12.52□□□□□ -0.41
CPA4-202ENST00000445470 HSPA1LP34931 641 aa12.52□□□□□ -0.41
CPA4-202ENST00000445470 APLP2Q06481 763 aa12.52□□□□□ -0.41
CPA4-202ENST00000445470 SLIT1O75093 1534 aa12.51□□□□□ -0.41
CPA4-202ENST00000445470 LRRC7Q96NW7 1537 aa12.51□□□□□ -0.41
CPA4-202ENST00000445470 ARHGAP23Q9P227 1491 aa12.51□□□□□ -0.41
CPA4-202ENST00000445470 STRCP1A6NGW2 1772 aa12.51□□□□□ -0.41
CPA4-202ENST00000445470 KDM5AP29375 1690 aaKnown RBP12.5□□□□□ -0.41
CPA4-202ENST00000445470 TRIM52Q96A61 297 aa12.5□□□□□ -0.41
CPA4-202ENST00000445470 CEP152O94986 1710 aa12.5□□□□□ -0.41
CPA4-202ENST00000445470 CROCC2H7BZ55 1655 aa12.5□□□□□ -0.41
CPA4-202ENST00000445470 ERBINQ96RT1 1412 aa12.5□□□□□ -0.41
CPA4-202ENST00000445470 FANCIQ9NVI1 1328 aa12.49□□□□□ -0.41
CPA4-202ENST00000445470 DDX10Q13206 875 aaKnown RBP12.49□□□□□ -0.41
CPA4-202ENST00000445470 SCAF11Q99590 1463 aaKnown RBP12.49□□□□□ -0.41
CPA4-202ENST00000445470 ERICH6Q7L0X2 663 aa12.48□□□□□ -0.41
CPA4-202ENST00000445470 DEKP35659 375 aaKnown RBP12.47□□□□□ -0.41
CPA4-202ENST00000445470 PIP4K2BP78356 416 aa12.47□□□□□ -0.41
CPA4-202ENST00000445470 ANO8Q9HCE9 1232 aaPredicted RBP12.46□□□□□ -0.41
CPA4-202ENST00000445470 LMTK2Q8IWU2 1503 aa12.46□□□□□ -0.41
CPA4-202ENST00000445470 KIF15Q9NS87 1388 aa12.43□□□□□ -0.42
CPA4-202ENST00000445470 PTPN23Q9H3S7 1636 aa12.43□□□□□ -0.42
CPA4-202ENST00000445470 ABCC5O15440 1437 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms