RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 FAM205CA6NFA0 338 aa10.25□□□□□ -0.77
HMGB3P6-201ENST00000444896 FECHP22830 423 aa10.25□□□□□ -0.77
HMGB3P6-201ENST00000444896 FCHSD2O94868 740 aa10.24□□□□□ -0.77
HMGB3P6-201ENST00000444896 C6orf132Q5T0Z8 1188 aa10.24□□□□□ -0.77
HMGB3P6-201ENST00000444896 GNPATO15228 680 aa10.23□□□□□ -0.77
HMGB3P6-201ENST00000444896 HIC1Q14526 733 aa10.23□□□□□ -0.77
HMGB3P6-201ENST00000444896 PSDA5PKW4 1024 aaPredicted RBP10.22□□□□□ -0.77
HMGB3P6-201ENST00000444896 PPP4R3BQ5MIZ7 849 aa10.21□□□□□ -0.77
HMGB3P6-201ENST00000444896 VARS2Q5ST30 1063 aaKnown RBP10.21□□□□□ -0.77
HMGB3P6-201ENST00000444896 POTEGQ6S5H5 508 aa10.21□□□□□ -0.77
HMGB3P6-201ENST00000444896 POTEMA6NI47 508 aa10.2□□□□□ -0.78
HMGB3P6-201ENST00000444896 KRI1Q8N9T8 703 aaKnown RBP10.2□□□□□ -0.78
HMGB3P6-201ENST00000444896 LCE2DQ5TA82 110 aaPredicted RBP10.19□□□□□ -0.78
HMGB3P6-201ENST00000444896 BCL2L12Q9HB09 334 aa10.19□□□□□ -0.78
HMGB3P6-201ENST00000444896 KCNH8Q96L42 1107 aa10.18□□□□□ -0.78
HMGB3P6-201ENST00000444896 AK7Q96M32 723 aa10.18□□□□□ -0.78
HMGB3P6-201ENST00000444896 MINK1Q8N4C8 1332 aaPredicted RBP10.17□□□□□ -0.78
HMGB3P6-201ENST00000444896 COL9A1P20849 921 aa10.17□□□□□ -0.78
HMGB3P6-201ENST00000444896 MAP2K5Q13163 448 aa10.17□□□□□ -0.78
HMGB3P6-201ENST00000444896 HS3ST6Q96QI5 342 aa10.17□□□□□ -0.78
HMGB3P6-201ENST00000444896 IRF6O14896 467 aa10.16□□□□□ -0.78
HMGB3P6-201ENST00000444896 CERKQ8TCT0 537 aa10.15□□□□□ -0.78
HMGB3P6-201ENST00000444896 POTEB3A0JP26 581 aa10.14□□□□□ -0.79
HMGB3P6-201ENST00000444896 TRIM66O15016 1216 aa10.14□□□□□ -0.79
HMGB3P6-201ENST00000444896 POTEBQ6S5H4 581 aa10.14□□□□□ -0.79
HMGB3P6-201ENST00000444896 POTEEQ6S8J3 1075 aa10.14□□□□□ -0.79
HMGB3P6-201ENST00000444896 CCDC102AQ96A19 550 aa10.14□□□□□ -0.79
HMGB3P6-201ENST00000444896 PTPREP23469 700 aa10.13□□□□□ -0.79
HMGB3P6-201ENST00000444896 TTC13Q8NBP0 860 aa10.13□□□□□ -0.79
HMGB3P6-201ENST00000444896 BRPF1P55201 1214 aaPredicted RBP10.12□□□□□ -0.79
HMGB3P6-201ENST00000444896 PADI6Q6TGC4 694 aa10.12□□□□□ -0.79
HMGB3P6-201ENST00000444896 PRSS12P56730 875 aa10.11□□□□□ -0.79
HMGB3P6-201ENST00000444896 FAM198AQ9UFP1 575 aa10.11□□□□□ -0.79
HMGB3P6-201ENST00000444896 PPP1R3GB7ZBB8 358 aa10.1□□□□□ -0.79
HMGB3P6-201ENST00000444896 CDCA7LQ96GN5 454 aa10.1□□□□□ -0.79
HMGB3P6-201ENST00000444896 RBM27Q9P2N5 1060 aaKnown RBP10.09□□□□□ -0.79
HMGB3P6-201ENST00000444896 PSEN2P49810 448 aa10.08□□□□□ -0.8
HMGB3P6-201ENST00000444896 FAM161AQ3B820 660 aa10.08□□□□□ -0.8
HMGB3P6-201ENST00000444896 ZNF687Q8N1G0 1237 aa10.08□□□□□ -0.8
HMGB3P6-201ENST00000444896 KCNK17Q96T54 332 aa10.08□□□□□ -0.8
HMGB3P6-201ENST00000444896 PDE4DQ08499 809 aa10.07□□□□□ -0.8
HMGB3P6-201ENST00000444896 CDAN1Q8IWY9 1227 aa10.07□□□□□ -0.8
HMGB3P6-201ENST00000444896 PHOX2BQ99453 314 aa10.07□□□□□ -0.8
HMGB3P6-201ENST00000444896 TSKSQ9UJT2 592 aa10.07□□□□□ -0.8
HMGB3P6-201ENST00000444896 AXIN2Q9Y2T1 843 aa10.06□□□□□ -0.8
HMGB3P6-201ENST00000444896 ADGRG1Q9Y653 693 aa10.06□□□□□ -0.8
HMGB3P6-201ENST00000444896 C3orf80F5H4A9 247 aa10.05□□□□□ -0.8
HMGB3P6-201ENST00000444896 ARHGAP33O14559 1287 aa10.05□□□□□ -0.8
HMGB3P6-201ENST00000444896 PBX2P40425 430 aa10.05□□□□□ -0.8
HMGB3P6-201ENST00000444896 NEUROD2Q15784 382 aa10.05□□□□□ -0.8
HMGB3P6-201ENST00000444896 AMHR2Q16671 573 aa10.05□□□□□ -0.8
HMGB3P6-201ENST00000444896 PROX2Q3B8N5 592 aa10.04□□□□□ -0.8
HMGB3P6-201ENST00000444896 DMRTA1Q5VZB9 504 aa10.04□□□□□ -0.8
HMGB3P6-201ENST00000444896 ZBED2Q9BTP6 218 aa10.04□□□□□ -0.8
HMGB3P6-201ENST00000444896 GPBP1L1Q9HC44 474 aaPredicted RBP10.04□□□□□ -0.8
HMGB3P6-201ENST00000444896 TRIM6-TRIM34B2RNG4 842 aa10.03□□□□□ -0.8
HMGB3P6-201ENST00000444896 METTL3Q86U44 580 aaKnown RBP10.02□□□□□ -0.81
HMGB3P6-201ENST00000444896 PXYLP1Q8TE99 480 aa10.02□□□□□ -0.81
HMGB3P6-201ENST00000444896 PCDH10Q9P2E7 1040 aa10.02□□□□□ -0.81
HMGB3P6-201ENST00000444896 ONECUT3O60422 494 aaPredicted RBP10.01□□□□□ -0.81
HMGB3P6-201ENST00000444896 OATP04181 439 aa10.01□□□□□ -0.81
HMGB3P6-201ENST00000444896 REPIN1Q9BWE0 567 aaKnown RBP10.01□□□□□ -0.81
HMGB3P6-201ENST00000444896 ANKRD13DQ6ZTN6 518 aa10□□□□□ -0.81
HMGB3P6-201ENST00000444896 STAC3Q96MF2 364 aa10□□□□□ -0.81
HMGB3P6-201ENST00000444896 EYA1Q99502 592 aa10□□□□□ -0.81
HMGB3P6-201ENST00000444896 TMUB1Q9BVT8 246 aa10□□□□□ -0.81
HMGB3P6-201ENST00000444896 PARP9Q8IXQ6 854 aa9.99□□□□□ -0.81
HMGB3P6-201ENST00000444896 SLC4A5Q9BY07 1137 aa9.99□□□□□ -0.81
HMGB3P6-201ENST00000444896 KDM4CQ9H3R0 1056 aa9.99□□□□□ -0.81
HMGB3P6-201ENST00000444896 NUDT18Q6ZVK8 323 aa9.98□□□□□ -0.81
HMGB3P6-201ENST00000444896 TATDN2Q93075 761 aa9.98□□□□□ -0.81
HMGB3P6-201ENST00000444896 KIAA1468Q9P260 1216 aa9.98□□□□□ -0.81
HMGB3P6-201ENST00000444896 PACS2Q86VP3 889 aa9.97□□□□□ -0.81
HMGB3P6-201ENST00000444896 RBM46Q8TBY0 533 aaKnown RBP9.97□□□□□ -0.81
HMGB3P6-201ENST00000444896 NLRP7Q8WX94 980 aa9.97□□□□□ -0.81
HMGB3P6-201ENST00000444896 PNMA3Q9UL41 463 aa9.97□□□□□ -0.81
HMGB3P6-201ENST00000444896 VPS9D1Q9Y2B5 631 aa9.96□□□□□ -0.82
HMGB3P6-201ENST00000444896 SMAPO00193 183 aa9.95□□□□□ -0.82
HMGB3P6-201ENST00000444896 LSM11P83369 360 aaKnown RBP eCLIP9.95□□□□□ -0.82
HMGB3P6-201ENST00000444896 MDM2Q00987 491 aaPredicted RBP9.95□□□□□ -0.82
HMGB3P6-201ENST00000444896 RCCD1A6NED2 376 aa9.94□□□□□ -0.82
HMGB3P6-201ENST00000444896 NBPF26B4DH59 902 aa9.94□□□□□ -0.82
HMGB3P6-201ENST00000444896 RABGEF1Q9UJ41 708 aa9.94□□□□□ -0.82
HMGB3P6-201ENST00000444896 TTLL12Q14166 644 aaPredicted RBP9.93□□□□□ -0.82
HMGB3P6-201ENST00000444896 GIGYF2Q6Y7W6 1299 aaKnown RBP9.93□□□□□ -0.82
HMGB3P6-201ENST00000444896 GPCPD1Q9NPB8 672 aa9.93□□□□□ -0.82
HMGB3P6-201ENST00000444896 BHMG1C9JSJ3 638 aaPredicted RBP9.92□□□□□ -0.82
HMGB3P6-201ENST00000444896 CLCN1P35523 988 aa9.92□□□□□ -0.82
HMGB3P6-201ENST00000444896 TMEM132AQ24JP5 1023 aa9.92□□□□□ -0.82
HMGB3P6-201ENST00000444896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.91□□□□□ -0.82
HMGB3P6-201ENST00000444896 MS4A1P11836 297 aa9.91□□□□□ -0.82
HMGB3P6-201ENST00000444896 FAM117AQ9C073 453 aa9.91□□□□□ -0.82
HMGB3P6-201ENST00000444896 TK2O00142 265 aa9.9□□□□□ -0.82
HMGB3P6-201ENST00000444896 IL27Q8NEV9 243 aa9.89□□□□□ -0.83
HMGB3P6-201ENST00000444896 KRTAP3-3Q9BYR6 98 aa9.89□□□□□ -0.83
HMGB3P6-201ENST00000444896 KRTAP3-2Q9BYR7 98 aa9.89□□□□□ -0.83
HMGB3P6-201ENST00000444896 SEPT9Q9UHD8 586 aaPredicted RBP9.89□□□□□ -0.83
HMGB3P6-201ENST00000444896 DNAJB2P25686 324 aa9.88□□□□□ -0.83
HMGB3P6-201ENST00000444896 SSTR3P32745 418 aaPredicted RBP9.88□□□□□ -0.83
HMGB3P6-201ENST00000444896 ADGRD1Q6QNK2 874 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms