RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 ZFYVE16Q7Z3T8 1539 aa19.13■□□□□ 0.65
RBM39-216ENST00000444878 CCDC144AA2RUR9 1427 aa19.12■□□□□ 0.65
RBM39-216ENST00000444878 UHRF1BP1Q6BDS2 1440 aa19.12■□□□□ 0.65
RBM39-216ENST00000444878 CCER2I3L3R5 266 aa19.12■□□□□ 0.65
RBM39-216ENST00000444878 ADGRL1O94910 1474 aa19.11■□□□□ 0.65
RBM39-216ENST00000444878 CCDC7Q96M83 1385 aa19.09■□□□□ 0.65
RBM39-216ENST00000444878 C11orf95C9JLR9 678 aaPredicted RBP19.08■□□□□ 0.64
RBM39-216ENST00000444878 MYT1Q01538 1121 aa19.08■□□□□ 0.64
RBM39-216ENST00000444878 DCAF11Q8TEB1 546 aa19.08■□□□□ 0.64
RBM39-216ENST00000444878 KDM2AQ9Y2K7 1162 aa19.08■□□□□ 0.64
RBM39-216ENST00000444878 SCAPERQ9BY12 1400 aa19.08■□□□□ 0.64
RBM39-216ENST00000444878 INO80Q9ULG1 1556 aaPredicted RBP19.08■□□□□ 0.64
RBM39-216ENST00000444878 ATP7AQ04656 1500 aa19.08■□□□□ 0.64
RBM39-216ENST00000444878 RALGAPBQ86X10 1494 aa19.07■□□□□ 0.64
RBM39-216ENST00000444878 PELP1Q8IZL8 1130 aaKnown RBP19.07■□□□□ 0.64
RBM39-216ENST00000444878 USP47Q96K76 1375 aa19.07■□□□□ 0.64
RBM39-216ENST00000444878 PLA2R1Q13018 1463 aa19.07■□□□□ 0.64
RBM39-216ENST00000444878 CNTLNQ9NXG0 1405 aa19.06■□□□□ 0.64
RBM39-216ENST00000444878 MYT1LQ9UL68 1186 aa19.06■□□□□ 0.64
RBM39-216ENST00000444878 KDM5CP41229 1560 aa19.05■□□□□ 0.64
RBM39-216ENST00000444878 ATP10AO60312 1499 aa19.03■□□□□ 0.64
RBM39-216ENST00000444878 KIF7Q2M1P5 1343 aa19.02■□□□□ 0.64
RBM39-216ENST00000444878 DEPDC5O75140 1603 aa19.02■□□□□ 0.64
RBM39-216ENST00000444878 CARD11Q9BXL7 1154 aa19.02■□□□□ 0.64
RBM39-216ENST00000444878 RGL3Q3MIN7 710 aa19.01■□□□□ 0.63
RBM39-216ENST00000444878 CFAP74Q9C0B2 1584 aa19.01■□□□□ 0.63
RBM39-216ENST00000444878 CD109Q6YHK3 1445 aa19■□□□□ 0.63
RBM39-216ENST00000444878 E9PCH4 1651 aa19■□□□□ 0.63
RBM39-216ENST00000444878 BCORL1Q5H9F3 1711 aa19■□□□□ 0.63
RBM39-216ENST00000444878 AEBP2Q6ZN18 517 aaPredicted RBP18.98■□□□□ 0.63
RBM39-216ENST00000444878 EIF2AK4Q9P2K8 1649 aaKnown RBP18.98■□□□□ 0.63
RBM39-216ENST00000444878 KIDINS220Q9ULH0 1771 aa18.98■□□□□ 0.63
RBM39-216ENST00000444878 ZNF518AQ6AHZ1 1483 aa18.98■□□□□ 0.63
RBM39-216ENST00000444878 TRPM1Q7Z4N2 1603 aa18.97■□□□□ 0.63
RBM39-216ENST00000444878 A2MP01023 1474 aa18.97■□□□□ 0.63
RBM39-216ENST00000444878 PRAG1Q86YV5 1406 aa18.97■□□□□ 0.63
RBM39-216ENST00000444878 KANK1Q14678 1352 aa18.97■□□□□ 0.63
RBM39-216ENST00000444878 DHX29Q7Z478 1369 aaKnown RBP18.97■□□□□ 0.63
RBM39-216ENST00000444878 TET3O43151 1660 aa18.96■□□□□ 0.63
RBM39-216ENST00000444878 ROCK2O75116 1388 aaKnown RBP18.96■□□□□ 0.63
RBM39-216ENST00000444878 KIF3BO15066 747 aa18.96■□□□□ 0.63
RBM39-216ENST00000444878 SPHKAPQ2M3C7 1700 aa18.95■□□□□ 0.62
RBM39-216ENST00000444878 ARID4BQ4LE39 1312 aaPredicted RBP18.94■□□□□ 0.62
RBM39-216ENST00000444878 KCNA4P22459 653 aa18.94■□□□□ 0.62
RBM39-216ENST00000444878 PRKCSHP14314 528 aaPredicted RBP18.93■□□□□ 0.62
RBM39-216ENST00000444878 VWDEQ8N2E2 1590 aa18.92■□□□□ 0.62
RBM39-216ENST00000444878 TRPM2O94759 1503 aa18.92■□□□□ 0.62
RBM39-216ENST00000444878 POLR3GLQ9BT43 218 aa18.92■□□□□ 0.62
RBM39-216ENST00000444878 PRDM15P57071 1507 aaPredicted RBP18.92■□□□□ 0.62
RBM39-216ENST00000444878 CEP152O94986 1710 aa18.91■□□□□ 0.62
RBM39-216ENST00000444878 ST20-MTHFSA0A0A6YYL1 179 aa18.91■□□□□ 0.62
RBM39-216ENST00000444878 PRKRIP1Q9H875 184 aaPredicted RBP18.91■□□□□ 0.62
RBM39-216ENST00000444878 POGZQ7Z3K3 1410 aa18.9■□□□□ 0.62
RBM39-216ENST00000444878 MROH1Q8NDA8 1641 aa18.89■□□□□ 0.61
RBM39-216ENST00000444878 PTPRTO14522 1441 aa18.89■□□□□ 0.61
RBM39-216ENST00000444878 CYB5RLQ6IPT4 315 aa18.87■□□□□ 0.61
RBM39-216ENST00000444878 HECW2Q9P2P5 1572 aa18.87■□□□□ 0.61
RBM39-216ENST00000444878 LAMC1P11047 1609 aa18.87■□□□□ 0.61
RBM39-216ENST00000444878 MLH3Q9UHC1 1453 aa18.87■□□□□ 0.61
RBM39-216ENST00000444878 GPRASP1Q5JY77 1395 aa18.87■□□□□ 0.61
RBM39-216ENST00000444878 NBPF1Q3BBV0 1214 aa18.86■□□□□ 0.61
RBM39-216ENST00000444878 CLTCL1P53675 1640 aa18.86■□□□□ 0.61
RBM39-216ENST00000444878 NEO1Q92859 1461 aa18.86■□□□□ 0.61
RBM39-216ENST00000444878 RNF17Q9BXT8 1623 aaKnown RBP18.83■□□□□ 0.61
RBM39-216ENST00000444878 RIMBP3CA6NJZ7 1639 aa18.83■□□□□ 0.6
RBM39-216ENST00000444878 RIMBP3BA6NNM3 1639 aa18.83■□□□□ 0.6
RBM39-216ENST00000444878 RIMBP3Q9UFD9 1639 aa18.83■□□□□ 0.6
RBM39-216ENST00000444878 EFCAB6Q5THR3 1501 aa18.82■□□□□ 0.6
RBM39-216ENST00000444878 MAP3K4Q9Y6R4 1608 aa18.81■□□□□ 0.6
RBM39-216ENST00000444878 ABCA6Q8N139 1617 aa18.8■□□□□ 0.6
RBM39-216ENST00000444878 KIF1BO60333 1816 aa18.8■□□□□ 0.6
RBM39-216ENST00000444878 PPRC1Q5VV67 1664 aaKnown RBP18.8■□□□□ 0.6
RBM39-216ENST00000444878 STAC3Q96MF2 364 aa18.8■□□□□ 0.6
RBM39-216ENST00000444878 MADDQ8WXG6 1647 aa18.8■□□□□ 0.6
RBM39-216ENST00000444878 FRMPD1Q5SYB0 1578 aa18.8■□□□□ 0.6
RBM39-216ENST00000444878 CFAP65Q6ZU64 1925 aaKnown RBP18.79■□□□□ 0.6
RBM39-216ENST00000444878 CCDC184Q52MB2 194 aa18.79■□□□□ 0.6
RBM39-216ENST00000444878 LMTK2Q8IWU2 1503 aa18.79■□□□□ 0.6
RBM39-216ENST00000444878 RAPGEF3O95398 923 aa18.79■□□□□ 0.6
RBM39-216ENST00000444878 MRS2Q9HD23 443 aa18.79■□□□□ 0.6
RBM39-216ENST00000444878 ERICH6Q7L0X2 663 aa18.78■□□□□ 0.6
RBM39-216ENST00000444878 HNRNPUQ00839 825 aaKnown RBP eCLIP18.77■□□□□ 0.6
RBM39-216ENST00000444878 NEURL4Q96JN8 1562 aa18.77■□□□□ 0.6
RBM39-216ENST00000444878 RICTORQ6R327 1708 aa18.76■□□□□ 0.59
RBM39-216ENST00000444878 GLI2P10070 1586 aa18.76■□□□□ 0.59
RBM39-216ENST00000444878 GGT6Q6P531 493 aa18.76■□□□□ 0.59
RBM39-216ENST00000444878 ARXQ96QS3 562 aa18.75■□□□□ 0.59
RBM39-216ENST00000444878 UGGT1Q9NYU2 1555 aa18.74■□□□□ 0.59
RBM39-216ENST00000444878 CNGB1Q14028 1251 aaPredicted RBP18.74■□□□□ 0.59
RBM39-216ENST00000444878 FAM9BQ8IZU0 186 aa18.73■□□□□ 0.59
RBM39-216ENST00000444878 TESK2Q96S53 571 aa18.72■□□□□ 0.59
RBM39-216ENST00000444878 DIP2CQ9Y2E4 1556 aa18.72■□□□□ 0.59
RBM39-216ENST00000444878 COL17A1Q9UMD9 1497 aaPredicted RBP18.72■□□□□ 0.59
RBM39-216ENST00000444878 SUPT16HQ9Y5B9 1047 aaKnown RBP18.71■□□□□ 0.59
RBM39-216ENST00000444878 IQGAP1P46940 1657 aa18.71■□□□□ 0.59
RBM39-216ENST00000444878 KIAA1210Q9ULL0 1709 aa18.7■□□□□ 0.58
RBM39-216ENST00000444878 WASHC2CQ9Y4E1 1318 aa18.7■□□□□ 0.58
RBM39-216ENST00000444878 NPATQ14207 1427 aa18.69■□□□□ 0.58
RBM39-216ENST00000444878 TMF1P82094 1093 aa18.69■□□□□ 0.58
RBM39-216ENST00000444878 FAM69CQ0P6D2 419 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms