RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 SLC4A3P48751 1232 aa13.21□□□□□ -0.3
CASP4-203ENST00000444739 CARD11Q9BXL7 1154 aa13.2□□□□□ -0.3
CASP4-203ENST00000444739 KDM2BQ8NHM5 1336 aa13.2□□□□□ -0.3
CASP4-203ENST00000444739 ZMYM4Q5VZL5 1548 aa13.2□□□□□ -0.3
CASP4-203ENST00000444739 BLMP54132 1417 aaPredicted RBP13.19□□□□□ -0.3
CASP4-203ENST00000444739 CROCC2H7BZ55 1655 aa13.19□□□□□ -0.3
CASP4-203ENST00000444739 ST20-MTHFSA0A0A6YYL1 179 aa13.19□□□□□ -0.3
CASP4-203ENST00000444739 INSRP06213 1382 aa13.19□□□□□ -0.3
CASP4-203ENST00000444739 PKD2Q13563 968 aa13.18□□□□□ -0.3
CASP4-203ENST00000444739 ADGRL2O95490 1459 aa13.18□□□□□ -0.3
CASP4-203ENST00000444739 ARID3CA6NKF2 412 aa13.18□□□□□ -0.3
CASP4-203ENST00000444739 CAMSAP2Q08AD1 1489 aa13.17□□□□□ -0.3
CASP4-203ENST00000444739 KIAA0586Q9BVV6 1533 aa13.17□□□□□ -0.3
CASP4-203ENST00000444739 EIF5BO60841 1220 aaKnown RBP13.16□□□□□ -0.3
CASP4-203ENST00000444739 C8orf34Q49A92 452 aa13.16□□□□□ -0.3
CASP4-203ENST00000444739 FAM43AQ8N2R8 423 aa13.16□□□□□ -0.3
CASP4-203ENST00000444739 DAXXQ9UER7 740 aaPredicted RBP13.16□□□□□ -0.3
CASP4-203ENST00000444739 PLEKHH2Q8IVE3 1493 aa13.15□□□□□ -0.3
CASP4-203ENST00000444739 FRAT2O75474 233 aaPredicted RBP13.15□□□□□ -0.3
CASP4-203ENST00000444739 FAM161AQ3B820 660 aa13.15□□□□□ -0.3
CASP4-203ENST00000444739 RSPH6AQ9H0K4 717 aa13.15□□□□□ -0.3
CASP4-203ENST00000444739 C20orf194Q5TEA3 1177 aa13.14□□□□□ -0.31
CASP4-203ENST00000444739 CENPQQ7L2Z9 268 aaPredicted RBP13.14□□□□□ -0.31
CASP4-203ENST00000444739 PBRM1Q86U86 1689 aa13.14□□□□□ -0.31
CASP4-203ENST00000444739 ITSN2Q9NZM3 1697 aa13.14□□□□□ -0.31
CASP4-203ENST00000444739 ZNF608Q9ULD9 1512 aaPredicted RBP13.14□□□□□ -0.31
CASP4-203ENST00000444739 TARBP1Q13395 1621 aaKnown RBP13.13□□□□□ -0.31
CASP4-203ENST00000444739 DCAF11Q8TEB1 546 aa13.13□□□□□ -0.31
CASP4-203ENST00000444739 CEP170Q5SW79 1584 aa13.13□□□□□ -0.31
CASP4-203ENST00000444739 NUP153P49790 1475 aaKnown RBP13.13□□□□□ -0.31
CASP4-203ENST00000444739 PER1O15534 1290 aaPredicted RBP13.13□□□□□ -0.31
CASP4-203ENST00000444739 VIRMAQ69YN4 1812 aaKnown RBP13.12□□□□□ -0.31
CASP4-203ENST00000444739 TRPM1Q7Z4N2 1603 aa13.1□□□□□ -0.31
CASP4-203ENST00000444739 ADAMTS12P58397 1594 aa13.1□□□□□ -0.31
CASP4-203ENST00000444739 RAPGEF6Q8TEU7 1601 aa13.1□□□□□ -0.31
CASP4-203ENST00000444739 ANKRD50Q9ULJ7 1429 aa13.1□□□□□ -0.31
CASP4-203ENST00000444739 KDM5DQ9BY66 1539 aa13.1□□□□□ -0.31
CASP4-203ENST00000444739 ANKRD30AQ9BXX3 1397 aa13.09□□□□□ -0.31
CASP4-203ENST00000444739 KIAA0556O60303 1618 aa13.09□□□□□ -0.31
CASP4-203ENST00000444739 KDM2AQ9Y2K7 1162 aa13.08□□□□□ -0.31
CASP4-203ENST00000444739 GPATCH8Q9UKJ3 1502 aaKnown RBP13.08□□□□□ -0.32
CASP4-203ENST00000444739 COL17A1Q9UMD9 1497 aaPredicted RBP13.07□□□□□ -0.32
CASP4-203ENST00000444739 ADCY10Q96PN6 1610 aa13.07□□□□□ -0.32
CASP4-203ENST00000444739 CFDP1Q9UEE9 299 aaPredicted RBP13.07□□□□□ -0.32
CASP4-203ENST00000444739 TROQ12816 1431 aaPredicted RBP13.07□□□□□ -0.32
CASP4-203ENST00000444739 NUP155O75694 1391 aa13.06□□□□□ -0.32
CASP4-203ENST00000444739 DISP1Q96F81 1524 aa13.06□□□□□ -0.32
CASP4-203ENST00000444739 PRG4Q92954 1404 aaPredicted RBP13.05□□□□□ -0.32
CASP4-203ENST00000444739 PRAG1Q86YV5 1406 aa13.04□□□□□ -0.32
CASP4-203ENST00000444739 CC2D1BQ5T0F9 858 aaKnown RBP13.04□□□□□ -0.32
CASP4-203ENST00000444739 DUSP27Q5VZP5 1158 aa13.04□□□□□ -0.32
CASP4-203ENST00000444739 CDC42BPAQ5VT25 1732 aa13.04□□□□□ -0.32
CASP4-203ENST00000444739 LAMC1P11047 1609 aa13.04□□□□□ -0.32
CASP4-203ENST00000444739 PLEKHH1Q9ULM0 1364 aa13.03□□□□□ -0.32
CASP4-203ENST00000444739 PTPRGP23470 1445 aa13.03□□□□□ -0.32
CASP4-203ENST00000444739 POGKQ9P215 609 aa13.03□□□□□ -0.32
CASP4-203ENST00000444739 EIF4G3O43432 1585 aaKnown RBP13.03□□□□□ -0.32
CASP4-203ENST00000444739 SHANK2Q9UPX8 1470 aa13.03□□□□□ -0.32
CASP4-203ENST00000444739 RGS3P49796 1198 aa13.03□□□□□ -0.32
CASP4-203ENST00000444739 USP19O94966 1318 aa13.02□□□□□ -0.32
CASP4-203ENST00000444739 GPRASP1Q5JY77 1395 aa13.02□□□□□ -0.32
CASP4-203ENST00000444739 PRDM15P57071 1507 aaPredicted RBP13.02□□□□□ -0.32
CASP4-203ENST00000444739 ZNF521Q96K83 1311 aa13.02□□□□□ -0.33
CASP4-203ENST00000444739 DISP3Q9P2K9 1392 aa13.02□□□□□ -0.33
CASP4-203ENST00000444739 RRAGDQ9NQL2 400 aaPredicted RBP13.01□□□□□ -0.33
CASP4-203ENST00000444739 ADAMTS8Q9UP79 889 aa13.01□□□□□ -0.33
CASP4-203ENST00000444739 CLASP1Q7Z460 1538 aa13.01□□□□□ -0.33
CASP4-203ENST00000444739 GOLGA6L2Q8N9W4 650 aaPredicted RBP13□□□□□ -0.33
CASP4-203ENST00000444739 ZNF777Q9ULD5 760 aaPredicted RBP13□□□□□ -0.33
CASP4-203ENST00000444739 C9orf84Q5VXU9 1444 aa13□□□□□ -0.33
CASP4-203ENST00000444739 EIF3AQ14152 1382 aaKnown RBP13□□□□□ -0.33
CASP4-203ENST00000444739 TESK2Q96S53 571 aa13□□□□□ -0.33
CASP4-203ENST00000444739 PANK3Q9H999 370 aa13□□□□□ -0.33
CASP4-203ENST00000444739 NBPF1Q3BBV0 1214 aa12.98□□□□□ -0.33
CASP4-203ENST00000444739 PDS5BQ9NTI5 1447 aa12.98□□□□□ -0.33
CASP4-203ENST00000444739 NLRP1Q9C000 1473 aa12.98□□□□□ -0.33
CASP4-203ENST00000444739 ERBINQ96RT1 1412 aa12.98□□□□□ -0.33
CASP4-203ENST00000444739 GOLGA2Q08379 1002 aa12.97□□□□□ -0.33
CASP4-203ENST00000444739 L1TD1Q5T7N2 865 aaKnown RBP12.97□□□□□ -0.33
CASP4-203ENST00000444739 ABCC10Q5T3U5 1492 aa12.96□□□□□ -0.34
CASP4-203ENST00000444739 SLFN5Q08AF3 891 aa12.96□□□□□ -0.34
CASP4-203ENST00000444739 TRMT2AQ8IZ69 625 aaKnown RBP12.96□□□□□ -0.34
CASP4-203ENST00000444739 MYO5CQ9NQX4 1742 aa12.96□□□□□ -0.34
CASP4-203ENST00000444739 FAM135AQ9P2D6 1515 aa12.95□□□□□ -0.34
CASP4-203ENST00000444739 A2MP01023 1474 aa12.95□□□□□ -0.34
CASP4-203ENST00000444739 SEC24BO95487 1268 aa12.94□□□□□ -0.34
CASP4-203ENST00000444739 BECN1Q14457 450 aa12.94□□□□□ -0.34
CASP4-203ENST00000444739 ANTXR1Q9H6X2 564 aa12.94□□□□□ -0.34
CASP4-203ENST00000444739 EIF2AK4Q9P2K8 1649 aaKnown RBP12.94□□□□□ -0.34
CASP4-203ENST00000444739 IGHDP01880 384 aa12.93□□□□□ -0.34
CASP4-203ENST00000444739 PPP2R1AP30153 589 aa12.93□□□□□ -0.34
CASP4-203ENST00000444739 WDR43Q15061 677 aaKnown RBP eCLIP12.93□□□□□ -0.34
CASP4-203ENST00000444739 CCDC144AA2RUR9 1427 aa12.93□□□□□ -0.34
CASP4-203ENST00000444739 NKTRP30414 1462 aaKnown RBP12.93□□□□□ -0.34
CASP4-203ENST00000444739 MAGI2Q86UL8 1455 aa12.93□□□□□ -0.34
CASP4-203ENST00000444739 SLKQ9H2G2 1235 aaPredicted RBP12.93□□□□□ -0.34
CASP4-203ENST00000444739 PLB1Q6P1J6 1458 aa12.92□□□□□ -0.34
CASP4-203ENST00000444739 WDR7Q9Y4E6 1490 aa12.92□□□□□ -0.34
CASP4-203ENST00000444739 TMF1P82094 1093 aa12.92□□□□□ -0.34
CASP4-203ENST00000444739 RNF17Q9BXT8 1623 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms