RNA–Protein interactions for RNA: ENST00000444116.1

FBXO42-202, Transcript of F-box protein 42, humanhuman

TSL 5

Gene FBXO42, Length 945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO42-202ENST00000444116 DAPK1P53355 1430 aa20.3■□□□□ 0.84
FBXO42-202ENST00000444116 RRP7BPQ9NSQ0 103 aa20.3■□□□□ 0.84
FBXO42-202ENST00000444116 TCOF1Q13428 1488 aaKnown RBP20.3■□□□□ 0.84
FBXO42-202ENST00000444116 FAM50AQ14320 339 aaKnown RBP20.29■□□□□ 0.84
FBXO42-202ENST00000444116 KIF15Q9NS87 1388 aa20.29■□□□□ 0.84
FBXO42-202ENST00000444116 SHANK2Q9UPX8 1470 aa20.29■□□□□ 0.84
FBXO42-202ENST00000444116 DUOX2Q9NRD8 1548 aa20.28■□□□□ 0.84
FBXO42-202ENST00000444116 CHIC2Q9UKJ5 165 aa20.27■□□□□ 0.84
FBXO42-202ENST00000444116 FBXO31Q5XUX0 539 aaPredicted RBP20.26■□□□□ 0.83
FBXO42-202ENST00000444116 STRCQ7RTU9 1775 aa20.26■□□□□ 0.83
FBXO42-202ENST00000444116 PZPP20742 1482 aa20.25■□□□□ 0.83
FBXO42-202ENST00000444116 TNRQ92752 1358 aa20.25■□□□□ 0.83
FBXO42-202ENST00000444116 DNMT1P26358 1616 aaKnown RBP20.25■□□□□ 0.83
FBXO42-202ENST00000444116 MYO3AQ8NEV4 1616 aa20.25■□□□□ 0.83
FBXO42-202ENST00000444116 EIF2AK4Q9P2K8 1649 aaKnown RBP20.25■□□□□ 0.83
FBXO42-202ENST00000444116 NCOA1Q15788 1441 aa20.25■□□□□ 0.83
FBXO42-202ENST00000444116 CAMSAP1Q5T5Y3 1602 aa20.24■□□□□ 0.83
FBXO42-202ENST00000444116 ANKRD30AQ9BXX3 1397 aa20.24■□□□□ 0.83
FBXO42-202ENST00000444116 CROCC2H7BZ55 1655 aa20.24■□□□□ 0.83
FBXO42-202ENST00000444116 PTPRTO14522 1441 aa20.23■□□□□ 0.83
FBXO42-202ENST00000444116 CERKQ8TCT0 537 aa20.23■□□□□ 0.83
FBXO42-202ENST00000444116 ERBINQ96RT1 1412 aa20.23■□□□□ 0.83
FBXO42-202ENST00000444116 CEP170BQ9Y4F5 1589 aaPredicted RBP20.23■□□□□ 0.83
FBXO42-202ENST00000444116 RNF17Q9BXT8 1623 aaKnown RBP20.23■□□□□ 0.83
FBXO42-202ENST00000444116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.21■□□□□ 0.83
FBXO42-202ENST00000444116 NCKAP5LQ9HCH0 1330 aa20.21■□□□□ 0.83
FBXO42-202ENST00000444116 ZNF142P52746 1687 aaPredicted RBP20.2■□□□□ 0.82
FBXO42-202ENST00000444116 A2ML1A8K2U0 1454 aa20.2■□□□□ 0.82
FBXO42-202ENST00000444116 PKD2Q13563 968 aa20.2■□□□□ 0.82
FBXO42-202ENST00000444116 ABCC3O15438 1527 aa20.19■□□□□ 0.82
FBXO42-202ENST00000444116 ZC3H13Q5T200 1668 aaKnown RBP20.19■□□□□ 0.82
FBXO42-202ENST00000444116 KANK1Q14678 1352 aa20.18■□□□□ 0.82
FBXO42-202ENST00000444116 PLA2R1Q13018 1463 aa20.18■□□□□ 0.82
FBXO42-202ENST00000444116 PPARGC1BQ86YN6 1023 aaKnown RBP20.17■□□□□ 0.82
FBXO42-202ENST00000444116 THEMISQ8N1K5 641 aaPredicted RBP20.15■□□□□ 0.82
FBXO42-202ENST00000444116 NLRP1Q9C000 1473 aa20.15■□□□□ 0.82
FBXO42-202ENST00000444116 MROH1Q8NDA8 1641 aa20.14■□□□□ 0.81
FBXO42-202ENST00000444116 PRDM15P57071 1507 aaPredicted RBP20.12■□□□□ 0.81
FBXO42-202ENST00000444116 ADGRL2O95490 1459 aa20.11■□□□□ 0.81
FBXO42-202ENST00000444116 ERVK-7P63135 1459 aa20.11■□□□□ 0.81
FBXO42-202ENST00000444116 CEP152O94986 1710 aa20.1■□□□□ 0.81
FBXO42-202ENST00000444116 UGGT1Q9NYU2 1555 aa20.1■□□□□ 0.81
FBXO42-202ENST00000444116 ANKLE2Q86XL3 938 aa20.1■□□□□ 0.81
FBXO42-202ENST00000444116 SPATA31D1Q6ZQQ2 1576 aa20.09■□□□□ 0.81
FBXO42-202ENST00000444116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.08■□□□□ 0.81
FBXO42-202ENST00000444116 ARHGAP31Q2M1Z3 1444 aa20.08■□□□□ 0.8
FBXO42-202ENST00000444116 ANKRD50Q9ULJ7 1429 aa20.08■□□□□ 0.8
FBXO42-202ENST00000444116 ITGAEP38570 1179 aa20.07■□□□□ 0.8
FBXO42-202ENST00000444116 DEPDC5O75140 1603 aa20.06■□□□□ 0.8
FBXO42-202ENST00000444116 ZNF335Q9H4Z2 1342 aaPredicted RBP20.04■□□□□ 0.8
FBXO42-202ENST00000444116 STAG3Q9UJ98 1225 aa20.03■□□□□ 0.8
FBXO42-202ENST00000444116 ROCK1Q13464 1354 aa20.02■□□□□ 0.8
FBXO42-202ENST00000444116 CFAP65Q6ZU64 1925 aaKnown RBP20.02■□□□□ 0.79
FBXO42-202ENST00000444116 LTBP4Q8N2S1 1624 aa20.02■□□□□ 0.79
FBXO42-202ENST00000444116 LMTK2Q8IWU2 1503 aa20.02■□□□□ 0.79
FBXO42-202ENST00000444116 POLR1AO95602 1720 aaPredicted RBP20■□□□□ 0.79
FBXO42-202ENST00000444116 VWDEQ8N2E2 1590 aa19.99■□□□□ 0.79
FBXO42-202ENST00000444116 NPHP4O75161 1426 aaPredicted RBP19.97■□□□□ 0.79
FBXO42-202ENST00000444116 NEURL4Q96JN8 1562 aa19.96■□□□□ 0.79
FBXO42-202ENST00000444116 EID1Q9Y6B2 187 aa19.96■□□□□ 0.79
FBXO42-202ENST00000444116 IQSEC2Q5JU85 1478 aa19.96■□□□□ 0.79
FBXO42-202ENST00000444116 EFCAB6Q5THR3 1501 aa19.95■□□□□ 0.78
FBXO42-202ENST00000444116 MED14O60244 1454 aa19.94■□□□□ 0.78
FBXO42-202ENST00000444116 IDI1Q13907 227 aa19.94■□□□□ 0.78
FBXO42-202ENST00000444116 TXNDC2Q86VQ3 553 aa19.94■□□□□ 0.78
FBXO42-202ENST00000444116 UBR1Q8IWV7 1749 aa19.93■□□□□ 0.78
FBXO42-202ENST00000444116 SLC52A1Q9NWF4 448 aa19.93■□□□□ 0.78
FBXO42-202ENST00000444116 RPRD2Q5VT52 1461 aaKnown RBP19.92■□□□□ 0.78
FBXO42-202ENST00000444116 NOS1P29475 1434 aa19.91■□□□□ 0.78
FBXO42-202ENST00000444116 RRBP1Q9P2E9 1410 aaKnown RBP19.91■□□□□ 0.78
FBXO42-202ENST00000444116 SCAF11Q99590 1463 aaKnown RBP19.91■□□□□ 0.78
FBXO42-202ENST00000444116 NUP155O75694 1391 aa19.9■□□□□ 0.78
FBXO42-202ENST00000444116 PIK3C2BO00750 1634 aa19.9■□□□□ 0.78
FBXO42-202ENST00000444116 UBAP1LF5GYI3 381 aa19.89■□□□□ 0.77
FBXO42-202ENST00000444116 UNC13BO14795 1591 aa19.89■□□□□ 0.77
FBXO42-202ENST00000444116 LTKP29376 864 aa19.89■□□□□ 0.77
FBXO42-202ENST00000444116 IQGAP1P46940 1657 aa19.89■□□□□ 0.77
FBXO42-202ENST00000444116 TET3O43151 1660 aa19.88■□□□□ 0.77
FBXO42-202ENST00000444116 SLIT1O75093 1534 aa19.88■□□□□ 0.77
FBXO42-202ENST00000444116 CPS1P31327 1500 aa19.88■□□□□ 0.77
FBXO42-202ENST00000444116 TMEM2Q9UHN6 1383 aa19.88■□□□□ 0.77
FBXO42-202ENST00000444116 ARHGAP23Q9P227 1491 aa19.87■□□□□ 0.77
FBXO42-202ENST00000444116 SYNMO15061 1565 aa19.87■□□□□ 0.77
FBXO42-202ENST00000444116 DISP3Q9P2K9 1392 aa19.85■□□□□ 0.77
FBXO42-202ENST00000444116 GCC2Q8IWJ2 1684 aa19.84■□□□□ 0.77
FBXO42-202ENST00000444116 CHGAP10645 457 aaKnown RBP19.83■□□□□ 0.77
FBXO42-202ENST00000444116 HDGFP51858 240 aaKnown RBP19.83■□□□□ 0.77
FBXO42-202ENST00000444116 BCANQ96GW7 911 aa19.83■□□□□ 0.77
FBXO42-202ENST00000444116 KDM5AP29375 1690 aaKnown RBP19.83■□□□□ 0.76
FBXO42-202ENST00000444116 ADGRB3O60242 1522 aa19.82■□□□□ 0.76
FBXO42-202ENST00000444116 IQGAP3Q86VI3 1631 aa19.82■□□□□ 0.76
FBXO42-202ENST00000444116 TOM1O60784 492 aa19.81■□□□□ 0.76
FBXO42-202ENST00000444116 SCAF1Q9H7N4 1312 aaKnown RBP19.79■□□□□ 0.76
FBXO42-202ENST00000444116 PPP1R15AO75807 674 aaPredicted RBP19.79■□□□□ 0.76
FBXO42-202ENST00000444116 E9PCH4 1651 aa19.78■□□□□ 0.76
FBXO42-202ENST00000444116 NAIPQ13075 1403 aa19.76■□□□□ 0.75
FBXO42-202ENST00000444116 PIP4K2BP78356 416 aa19.76■□□□□ 0.75
FBXO42-202ENST00000444116 TRIM52Q96A61 297 aa19.76■□□□□ 0.75
FBXO42-202ENST00000444116 SLC26A8Q96RN1 970 aa19.76■□□□□ 0.75
FBXO42-202ENST00000444116 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms