RNA–Protein interactions for RNA: ENST00000443501.1

FNDC3B-206, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-206ENST00000443501 DNMT1P26358 1616 aaKnown RBP13.57□□□□□ -0.24
FNDC3B-206ENST00000443501 TROQ12816 1431 aaPredicted RBP13.57□□□□□ -0.24
FNDC3B-206ENST00000443501 FKBP8Q14318 412 aa13.57□□□□□ -0.24
FNDC3B-206ENST00000443501 POTEAQ6S8J7 498 aa13.57□□□□□ -0.24
FNDC3B-206ENST00000443501 CLTCQ00610 1675 aaKnown RBP13.56□□□□□ -0.24
FNDC3B-206ENST00000443501 CAPN15O75808 1086 aa13.55□□□□□ -0.24
FNDC3B-206ENST00000443501 CLIP1P30622 1438 aa13.55□□□□□ -0.24
FNDC3B-206ENST00000443501 ITSN2Q9NZM3 1697 aa13.54□□□□□ -0.24
FNDC3B-206ENST00000443501 POLR1AO95602 1720 aaPredicted RBP13.54□□□□□ -0.24
FNDC3B-206ENST00000443501 CDC42BPBQ9Y5S2 1711 aa13.54□□□□□ -0.24
FNDC3B-206ENST00000443501 ANKLE2Q86XL3 938 aa13.52□□□□□ -0.25
FNDC3B-206ENST00000443501 SAMD9LQ8IVG5 1584 aa13.51□□□□□ -0.25
FNDC3B-206ENST00000443501 LRRC7Q96NW7 1537 aa13.51□□□□□ -0.25
FNDC3B-206ENST00000443501 MED14O60244 1454 aa13.51□□□□□ -0.25
FNDC3B-206ENST00000443501 FMN1Q68DA7 1419 aa13.51□□□□□ -0.25
FNDC3B-206ENST00000443501 PREX2Q70Z35 1606 aa13.5□□□□□ -0.25
FNDC3B-206ENST00000443501 RNF17Q9BXT8 1623 aaKnown RBP13.5□□□□□ -0.25
FNDC3B-206ENST00000443501 PLXNC1O60486 1568 aa13.5□□□□□ -0.25
FNDC3B-206ENST00000443501 ATP1B4Q9UN42 357 aaPredicted RBP13.5□□□□□ -0.25
FNDC3B-206ENST00000443501 SPAG9O60271 1321 aaKnown RBP13.49□□□□□ -0.25
FNDC3B-206ENST00000443501 GGT6Q6P531 493 aa13.49□□□□□ -0.25
FNDC3B-206ENST00000443501 NPHP4O75161 1426 aaPredicted RBP13.48□□□□□ -0.25
FNDC3B-206ENST00000443501 A2MP01023 1474 aa13.48□□□□□ -0.25
FNDC3B-206ENST00000443501 POLA2Q14181 598 aa13.47□□□□□ -0.25
FNDC3B-206ENST00000443501 THEMISQ8N1K5 641 aaPredicted RBP13.47□□□□□ -0.25
FNDC3B-206ENST00000443501 DEPDC5O75140 1603 aa13.46□□□□□ -0.25
FNDC3B-206ENST00000443501 TNRQ92752 1358 aa13.46□□□□□ -0.25
FNDC3B-206ENST00000443501 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.46□□□□□ -0.25
FNDC3B-206ENST00000443501 SYNMO15061 1565 aa13.46□□□□□ -0.25
FNDC3B-206ENST00000443501 MKRN4PQ13434 485 aaPredicted RBP13.46□□□□□ -0.25
FNDC3B-206ENST00000443501 ATP7AQ04656 1500 aa13.44□□□□□ -0.26
FNDC3B-206ENST00000443501 UPF1Q92900 1129 aaKnown RBP eCLIP13.44□□□□□ -0.26
FNDC3B-206ENST00000443501 FAM135BQ49AJ0 1406 aa13.44□□□□□ -0.26
FNDC3B-206ENST00000443501 SETD1AO15047 1707 aaKnown RBP13.44□□□□□ -0.26
FNDC3B-206ENST00000443501 STRCP1A6NGW2 1772 aa13.43□□□□□ -0.26
FNDC3B-206ENST00000443501 FBXO31Q5XUX0 539 aaPredicted RBP13.42□□□□□ -0.26
FNDC3B-206ENST00000443501 INO80Q9ULG1 1556 aaPredicted RBP13.41□□□□□ -0.26
FNDC3B-206ENST00000443501 IQGAP1P46940 1657 aa13.41□□□□□ -0.26
FNDC3B-206ENST00000443501 EEA1Q15075 1411 aa13.41□□□□□ -0.26
FNDC3B-206ENST00000443501 SYCP2Q9BX26 1530 aa13.41□□□□□ -0.26
FNDC3B-206ENST00000443501 PZPP20742 1482 aa13.41□□□□□ -0.26
FNDC3B-206ENST00000443501 NLRP1Q9C000 1473 aa13.41□□□□□ -0.26
FNDC3B-206ENST00000443501 FAM135AQ9P2D6 1515 aa13.4□□□□□ -0.26
FNDC3B-206ENST00000443501 HNRNPMP52272 730 aaKnown RBP eCLIP13.4□□□□□ -0.262e-7■■■□□ 18.2
FNDC3B-206ENST00000443501 UGGT1Q9NYU2 1555 aa13.4□□□□□ -0.26
FNDC3B-206ENST00000443501 MIA2Q96PC5 1412 aa13.39□□□□□ -0.27
FNDC3B-206ENST00000443501 KIAA1107Q9UPP5 1409 aa13.39□□□□□ -0.27
FNDC3B-206ENST00000443501 ABCB7O75027 752 aa13.39□□□□□ -0.27
FNDC3B-206ENST00000443501 ZNF777Q9ULD5 760 aaPredicted RBP13.39□□□□□ -0.27
FNDC3B-206ENST00000443501 CDC42BPAQ5VT25 1732 aa13.38□□□□□ -0.27
FNDC3B-206ENST00000443501 ARHGAP35Q9NRY4 1499 aa13.36□□□□□ -0.27
FNDC3B-206ENST00000443501 LRRIQ1Q96JM4 1722 aa13.36□□□□□ -0.27
FNDC3B-206ENST00000443501 PLEKHH2Q8IVE3 1493 aa13.36□□□□□ -0.27
FNDC3B-206ENST00000443501 SRCAPQ6ZRS2 3230 aa13.35□□□□□ -0.27
FNDC3B-206ENST00000443501 ADGBQ8N7X0 1667 aa13.35□□□□□ -0.27
FNDC3B-206ENST00000443501 GPATCH8Q9UKJ3 1502 aaKnown RBP13.34□□□□□ -0.27
FNDC3B-206ENST00000443501 CCDC18Q5T9S5 1454 aa13.34□□□□□ -0.27
FNDC3B-206ENST00000443501 KDM5DQ9BY66 1539 aa13.34□□□□□ -0.27
FNDC3B-206ENST00000443501 DHX29Q7Z478 1369 aaKnown RBP13.32□□□□□ -0.28
FNDC3B-206ENST00000443501 ZC3H13Q5T200 1668 aaKnown RBP13.32□□□□□ -0.28
FNDC3B-206ENST00000443501 DSG3P32926 999 aa13.31□□□□□ -0.28
FNDC3B-206ENST00000443501 WASHC2CQ9Y4E1 1318 aa13.31□□□□□ -0.28
FNDC3B-206ENST00000443501 XIRP1Q702N8 1843 aaKnown RBP13.3□□□□□ -0.28
FNDC3B-206ENST00000443501 JCADQ9P266 1359 aa13.3□□□□□ -0.28
FNDC3B-206ENST00000443501 RTEL1-TNFRSF6BF6WH68 1400 aa13.3□□□□□ -0.28
FNDC3B-206ENST00000443501 ROBO1Q9Y6N7 1651 aa13.29□□□□□ -0.28
FNDC3B-206ENST00000443501 ZNF772Q68DY9 489 aaPredicted RBP13.29□□□□□ -0.28
FNDC3B-206ENST00000443501 CFDP1Q9UEE9 299 aaPredicted RBP13.29□□□□□ -0.28
FNDC3B-206ENST00000443501 KIF3BO15066 747 aa13.28□□□□□ -0.28
FNDC3B-206ENST00000443501 TRIM52Q96A61 297 aa13.28□□□□□ -0.28
FNDC3B-206ENST00000443501 CASKIN1Q8WXD9 1431 aa13.28□□□□□ -0.28
FNDC3B-206ENST00000443501 LRRC9Q6ZRR7 1453 aa13.27□□□□□ -0.29
FNDC3B-206ENST00000443501 SCAF11Q99590 1463 aaKnown RBP13.27□□□□□ -0.29
FNDC3B-206ENST00000443501 TMEM94Q12767 1356 aa13.26□□□□□ -0.29
FNDC3B-206ENST00000443501 CDK12Q9NYV4 1490 aaPredicted RBP13.25□□□□□ -0.29
FNDC3B-206ENST00000443501 MBD5Q9P267 1494 aa13.24□□□□□ -0.29
FNDC3B-206ENST00000443501 UBTFP17480 764 aaKnown RBP13.24□□□□□ -0.29
FNDC3B-206ENST00000443501 ARHGAP23Q9P227 1491 aa13.23□□□□□ -0.29
FNDC3B-206ENST00000443501 SPATA31A6Q5VVP1 1343 aa13.23□□□□□ -0.29
FNDC3B-206ENST00000443501 RXRBP28702 533 aa13.23□□□□□ -0.29
FNDC3B-206ENST00000443501 LTKP29376 864 aa13.23□□□□□ -0.29
FNDC3B-206ENST00000443501 CCNB3Q8WWL7 1395 aa13.22□□□□□ -0.29
FNDC3B-206ENST00000443501 LRP6O75581 1613 aa13.22□□□□□ -0.29
FNDC3B-206ENST00000443501 TXNDC2Q86VQ3 553 aa13.22□□□□□ -0.29
FNDC3B-206ENST00000443501 SLIT1O75093 1534 aa13.22□□□□□ -0.29
FNDC3B-206ENST00000443501 MAP3K1Q13233 1512 aa13.22□□□□□ -0.29
FNDC3B-206ENST00000443501 SPDYE4A6NLX3 237 aa13.21□□□□□ -0.29
FNDC3B-206ENST00000443501 FGD6Q6ZV73 1430 aa13.21□□□□□ -0.3
FNDC3B-206ENST00000443501 PHLPP1O60346 1717 aa13.2□□□□□ -0.3
FNDC3B-206ENST00000443501 KCNA6P17658 529 aa13.2□□□□□ -0.3
FNDC3B-206ENST00000443501 SLAIN2Q9P270 581 aa13.2□□□□□ -0.3
FNDC3B-206ENST00000443501 NCOA2Q15596 1464 aa13.2□□□□□ -0.3
FNDC3B-206ENST00000443501 UBR1Q8IWV7 1749 aa13.19□□□□□ -0.3
FNDC3B-206ENST00000443501 ZNF644Q9H582 1327 aaPredicted RBP13.19□□□□□ -0.3
FNDC3B-206ENST00000443501 ERVK-7P63135 1459 aa13.19□□□□□ -0.3
FNDC3B-206ENST00000443501 CACNB1Q02641 598 aaPredicted RBP13.19□□□□□ -0.3
FNDC3B-206ENST00000443501 MEX3CQ5U5Q3 659 aaKnown RBP13.19□□□□□ -0.3
FNDC3B-206ENST00000443501 PROSER2Q86WR7 435 aaPredicted RBP13.18□□□□□ -0.3
FNDC3B-206ENST00000443501 EID1Q9Y6B2 187 aa13.18□□□□□ -0.3
FNDC3B-206ENST00000443501 COL16A1Q07092 1604 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms