RNA–Protein interactions for RNA: ENST00000441778.6

LDB2-202, Transcript of LIM domain binding 2, humanhuman

TSL 1 (best) BASIC

Gene LDB2, Length 2,476 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-202ENST00000441778 MS4A1P11836 297 aa11.93□□□□□ -0.5
LDB2-202ENST00000441778 PARD3Q8TEW0 1356 aa11.92□□□□□ -0.5
LDB2-202ENST00000441778 KDM5DQ9BY66 1539 aa11.92□□□□□ -0.5
LDB2-202ENST00000441778 PRKCSHP14314 528 aaPredicted RBP11.92□□□□□ -0.5
LDB2-202ENST00000441778 CDCA7LQ96GN5 454 aa11.92□□□□□ -0.5
LDB2-202ENST00000441778 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
LDB2-202ENST00000441778 SKAP1Q86WV1 359 aa11.91□□□□□ -0.5
LDB2-202ENST00000441778 NUP155O75694 1391 aa11.91□□□□□ -0.5
LDB2-202ENST00000441778 TRPM1Q7Z4N2 1603 aa11.91□□□□□ -0.5
LDB2-202ENST00000441778 PDE3BQ13370 1112 aa11.91□□□□□ -0.5
LDB2-202ENST00000441778 NLRP13Q86W25 1043 aa11.91□□□□□ -0.5
LDB2-202ENST00000441778 USP35Q9P2H5 1018 aa11.91□□□□□ -0.5
LDB2-202ENST00000441778 ZNF608Q9ULD9 1512 aaPredicted RBP11.9□□□□□ -0.5
LDB2-202ENST00000441778 PLB1Q6P1J6 1458 aa11.9□□□□□ -0.5
LDB2-202ENST00000441778 RTN4Q9NQC3 1192 aaKnown RBP11.89□□□□□ -0.51
LDB2-202ENST00000441778 PLIN1O60240 522 aa11.89□□□□□ -0.51
LDB2-202ENST00000441778 WASHC2CQ9Y4E1 1318 aa11.89□□□□□ -0.51
LDB2-202ENST00000441778 SHANK2Q9UPX8 1470 aa11.89□□□□□ -0.51
LDB2-202ENST00000441778 DCAF11Q8TEB1 546 aa11.88□□□□□ -0.51
LDB2-202ENST00000441778 C9orf84Q5VXU9 1444 aa11.88□□□□□ -0.51
LDB2-202ENST00000441778 BLMP54132 1417 aaPredicted RBP11.88□□□□□ -0.51
LDB2-202ENST00000441778 CRBNQ96SW2 442 aa11.87□□□□□ -0.51
LDB2-202ENST00000441778 PPM1GO15355 546 aaPredicted RBP11.87□□□□□ -0.51
LDB2-202ENST00000441778 PTPRGP23470 1445 aa11.87□□□□□ -0.51
LDB2-202ENST00000441778 GRIN2AQ12879 1464 aa11.87□□□□□ -0.51
LDB2-202ENST00000441778 PER1O15534 1290 aaPredicted RBP11.86□□□□□ -0.51
LDB2-202ENST00000441778 MRC2Q9UBG0 1479 aa11.86□□□□□ -0.51
LDB2-202ENST00000441778 PRAG1Q86YV5 1406 aa11.85□□□□□ -0.51
LDB2-202ENST00000441778 COL17A1Q9UMD9 1497 aaPredicted RBP11.85□□□□□ -0.51
LDB2-202ENST00000441778 ZMYM4Q5VZL5 1548 aa11.84□□□□□ -0.51
LDB2-202ENST00000441778 ABCC10Q5T3U5 1492 aa11.84□□□□□ -0.51
LDB2-202ENST00000441778 EIF4G3O43432 1585 aaKnown RBP11.84□□□□□ -0.51
LDB2-202ENST00000441778 CC2D1BQ5T0F9 858 aaKnown RBP11.83□□□□□ -0.52
LDB2-202ENST00000441778 DDRGK1Q96HY6 314 aa11.83□□□□□ -0.52
LDB2-202ENST00000441778 INSRP06213 1382 aa11.83□□□□□ -0.52
LDB2-202ENST00000441778 C20orf194Q5TEA3 1177 aa11.82□□□□□ -0.52
LDB2-202ENST00000441778 MYO5CQ9NQX4 1742 aa11.82□□□□□ -0.52
LDB2-202ENST00000441778 FAM135AQ9P2D6 1515 aa11.82□□□□□ -0.52
LDB2-202ENST00000441778 DISP3Q9P2K9 1392 aa11.82□□□□□ -0.52
LDB2-202ENST00000441778 LAMC1P11047 1609 aa11.82□□□□□ -0.52
LDB2-202ENST00000441778 PRDM15P57071 1507 aaPredicted RBP11.82□□□□□ -0.52
LDB2-202ENST00000441778 PLEKHH2Q8IVE3 1493 aa11.82□□□□□ -0.52
LDB2-202ENST00000441778 IFT140Q96RY7 1462 aa11.82□□□□□ -0.52
LDB2-202ENST00000441778 KDM2BQ8NHM5 1336 aa11.82□□□□□ -0.52
LDB2-202ENST00000441778 NBPF1Q3BBV0 1214 aa11.82□□□□□ -0.52
LDB2-202ENST00000441778 GPRASP1Q5JY77 1395 aa11.8□□□□□ -0.52
LDB2-202ENST00000441778 SLC4A3P48751 1232 aa11.8□□□□□ -0.52
LDB2-202ENST00000441778 ABCA8O94911 1581 aa11.8□□□□□ -0.52
LDB2-202ENST00000441778 ARHGEF5Q12774 1597 aa11.8□□□□□ -0.52
LDB2-202ENST00000441778 NFKBIBQ15653 356 aa11.8□□□□□ -0.52
LDB2-202ENST00000441778 BRPF3Q9ULD4 1205 aa11.8□□□□□ -0.52
LDB2-202ENST00000441778 A2MP01023 1474 aa11.79□□□□□ -0.52
LDB2-202ENST00000441778 GSE1Q14687 1217 aa11.79□□□□□ -0.52
LDB2-202ENST00000441778 TESK2Q96S53 571 aa11.79□□□□□ -0.52
LDB2-202ENST00000441778 MAGI1Q96QZ7 1491 aaPredicted RBP11.78□□□□□ -0.52
LDB2-202ENST00000441778 CCDC144AA2RUR9 1427 aa11.78□□□□□ -0.52
LDB2-202ENST00000441778 PANK3Q9H999 370 aa11.78□□□□□ -0.52
LDB2-202ENST00000441778 ERBINQ96RT1 1412 aa11.77□□□□□ -0.52
LDB2-202ENST00000441778 PLA2R1Q13018 1463 aa11.77□□□□□ -0.53
LDB2-202ENST00000441778 TSPY4P0CV99 314 aa11.77□□□□□ -0.53
LDB2-202ENST00000441778 TSPY10P0CW01 314 aa11.77□□□□□ -0.53
LDB2-202ENST00000441778 HNRNPMP52272 730 aaKnown RBP eCLIP11.77□□□□□ -0.53
LDB2-202ENST00000441778 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.77□□□□□ -0.53
LDB2-202ENST00000441778 RGL3Q3MIN7 710 aa11.76□□□□□ -0.53
LDB2-202ENST00000441778 C8orf34Q49A92 452 aa11.76□□□□□ -0.53
LDB2-202ENST00000441778 PLEKHH1Q9ULM0 1364 aa11.76□□□□□ -0.53
LDB2-202ENST00000441778 SAMD9LQ8IVG5 1584 aa11.76□□□□□ -0.53
LDB2-202ENST00000441778 ATP10BO94823 1461 aa11.76□□□□□ -0.53
LDB2-202ENST00000441778 CENPQQ7L2Z9 268 aaPredicted RBP11.76□□□□□ -0.53
LDB2-202ENST00000441778 FRAT1Q92837 279 aaPredicted RBP11.76□□□□□ -0.53
LDB2-202ENST00000441778 CDC42BPBQ9Y5S2 1711 aa11.75□□□□□ -0.53
LDB2-202ENST00000441778 UNC13BO14795 1591 aa11.75□□□□□ -0.53
LDB2-202ENST00000441778 ADAMTS8Q9UP79 889 aa11.75□□□□□ -0.53
LDB2-202ENST00000441778 EIF2AK4Q9P2K8 1649 aaKnown RBP11.75□□□□□ -0.53
LDB2-202ENST00000441778 VIRMAQ69YN4 1812 aaKnown RBP11.75□□□□□ -0.53
LDB2-202ENST00000441778 RNF17Q9BXT8 1623 aaKnown RBP11.75□□□□□ -0.53
LDB2-202ENST00000441778 PLEKHD1A6NEE1 506 aa11.74□□□□□ -0.53
LDB2-202ENST00000441778 DUSP27Q5VZP5 1158 aa11.74□□□□□ -0.53
LDB2-202ENST00000441778 CCDC141Q6ZP82 1450 aa11.74□□□□□ -0.53
LDB2-202ENST00000441778 FAM161AQ3B820 660 aa11.74□□□□□ -0.53
LDB2-202ENST00000441778 SYNJ2O15056 1496 aa11.73□□□□□ -0.53
LDB2-202ENST00000441778 CARMIL2Q6F5E8 1435 aa11.73□□□□□ -0.53
LDB2-202ENST00000441778 PREX2Q70Z35 1606 aa11.73□□□□□ -0.53
LDB2-202ENST00000441778 MAGI2Q86UL8 1455 aa11.72□□□□□ -0.53
LDB2-202ENST00000441778 ZNF521Q96K83 1311 aa11.72□□□□□ -0.53
LDB2-202ENST00000441778 CLASP1Q7Z460 1538 aa11.72□□□□□ -0.53
LDB2-202ENST00000441778 WDR7Q9Y4E6 1490 aa11.71□□□□□ -0.53
LDB2-202ENST00000441778 IQGAP3Q86VI3 1631 aa11.71□□□□□ -0.53
LDB2-202ENST00000441778 TMF1P82094 1093 aa11.71□□□□□ -0.53
LDB2-202ENST00000441778 DAXXQ9UER7 740 aaPredicted RBP11.71□□□□□ -0.53
LDB2-202ENST00000441778 FRAT2O75474 233 aaPredicted RBP11.69□□□□□ -0.54
LDB2-202ENST00000441778 PPP2R1AP30153 589 aa11.69□□□□□ -0.54
LDB2-202ENST00000441778 JPH4Q96JJ6 628 aa11.69□□□□□ -0.54
LDB2-202ENST00000441778 NUP160Q12769 1436 aa11.69□□□□□ -0.54
LDB2-202ENST00000441778 IQGAP1P46940 1657 aa11.69□□□□□ -0.54
LDB2-202ENST00000441778 SYCP2Q9BX26 1530 aa11.69□□□□□ -0.54
LDB2-202ENST00000441778 RGS3P49796 1198 aa11.69□□□□□ -0.54
LDB2-202ENST00000441778 CHMP7Q8WUX9 453 aaPredicted RBP11.69□□□□□ -0.54
LDB2-202ENST00000441778 MAST1Q9Y2H9 1570 aa11.68□□□□□ -0.54
LDB2-202ENST00000441778 GOLGA2Q08379 1002 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms