RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 CCDC82Q8N4S0 544 aa7.25□□□□□ -1.25
CDC42BPA-207ENST00000441725 GIGYF2Q6Y7W6 1299 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-207ENST00000441725 KIF3CO14782 793 aa7.24□□□□□ -1.25
CDC42BPA-207ENST00000441725 DDX12PQ92771 950 aa7.24□□□□□ -1.25
CDC42BPA-207ENST00000441725 REPIN1Q9BWE0 567 aaKnown RBP7.24□□□□□ -1.25
CDC42BPA-207ENST00000441725 A6NJR5 290 aa7.23□□□□□ -1.25
CDC42BPA-207ENST00000441725 TRAK2O60296 914 aa7.23□□□□□ -1.25
CDC42BPA-207ENST00000441725 PRIM1P49642 420 aaKnown RBP7.23□□□□□ -1.25
CDC42BPA-207ENST00000441725 NPM2Q86SE8 214 aaKnown RBP7.23□□□□□ -1.25
CDC42BPA-207ENST00000441725 UPF1Q92900 1129 aaKnown RBP eCLIP7.23□□□□□ -1.25
CDC42BPA-207ENST00000441725 TMEM92Q6UXU6 159 aa7.23□□□□□ -1.25
CDC42BPA-207ENST00000441725 PDIA4P13667 645 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-207ENST00000441725 PTGER2P43116 358 aa7.22□□□□□ -1.25
CDC42BPA-207ENST00000441725 PTGDRQ13258 359 aa7.22□□□□□ -1.25
CDC42BPA-207ENST00000441725 PCMTD1Q96MG8 357 aaPredicted RBP7.22□□□□□ -1.25
CDC42BPA-207ENST00000441725 MCM6Q14566 821 aa7.21□□□□□ -1.26
CDC42BPA-207ENST00000441725 SNPHO15079 494 aa7.19□□□□□ -1.26
CDC42BPA-207ENST00000441725 NECTIN2Q92692 538 aa7.19□□□□□ -1.26
CDC42BPA-207ENST00000441725 OXER1Q8TDS5 423 aa7.18□□□□□ -1.26
CDC42BPA-207ENST00000441725 LCE2DQ5TA82 110 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-207ENST00000441725 FAM163AQ96GL9 167 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-207ENST00000441725 ZBTB7CA1YPR0 619 aa7.17□□□□□ -1.26
CDC42BPA-207ENST00000441725 SH3D19Q5HYK7 790 aa7.17□□□□□ -1.26
CDC42BPA-207ENST00000441725 TMUB1Q9BVT8 246 aa7.16□□□□□ -1.26
CDC42BPA-207ENST00000441725 ZNF777Q9ULD5 760 aaPredicted RBP7.16□□□□□ -1.26
CDC42BPA-207ENST00000441725 POM121Q96HA1 1249 aa7.15□□□□□ -1.26
CDC42BPA-207ENST00000441725 EVI5O60447 810 aa7.15□□□□□ -1.27
CDC42BPA-207ENST00000441725 HOXB3P14651 431 aaPredicted RBP7.15□□□□□ -1.27
CDC42BPA-207ENST00000441725 PROSER2Q86WR7 435 aaPredicted RBP7.15□□□□□ -1.27
CDC42BPA-207ENST00000441725 PHOX2BQ99453 314 aa7.15□□□□□ -1.27
CDC42BPA-207ENST00000441725 ST18O60284 1047 aa7.14□□□□□ -1.27
CDC42BPA-207ENST00000441725 CDHR5Q9HBB8 845 aa7.14□□□□□ -1.27
CDC42BPA-207ENST00000441725 TBC1D12O60347 775 aa7.13□□□□□ -1.27
CDC42BPA-207ENST00000441725 MDM2Q00987 491 aaPredicted RBP7.13□□□□□ -1.27
CDC42BPA-207ENST00000441725 FNBP4Q8N3X1 1017 aaPredicted RBP7.13□□□□□ -1.27
CDC42BPA-207ENST00000441725 NPDC1Q9NQX5 325 aaPredicted RBP7.13□□□□□ -1.27
CDC42BPA-207ENST00000441725 CLCN1P35523 988 aa7.13□□□□□ -1.27
CDC42BPA-207ENST00000441725 SKIV2LQ15477 1246 aaKnown RBP7.13□□□□□ -1.27
CDC42BPA-207ENST00000441725 DOK7Q18PE1 504 aa7.13□□□□□ -1.27
CDC42BPA-207ENST00000441725 PROCA1Q8NCQ7 364 aaPredicted RBP7.13□□□□□ -1.27
CDC42BPA-207ENST00000441725 GPCPD1Q9NPB8 672 aa7.13□□□□□ -1.27
CDC42BPA-207ENST00000441725 CCDC9Q9Y3X0 531 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-207ENST00000441725 SSTR3P32745 418 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-207ENST00000441725 BEGAINQ9BUH8 593 aa7.1□□□□□ -1.27
CDC42BPA-207ENST00000441725 POTEMA6NI47 508 aa7.1□□□□□ -1.27
CDC42BPA-207ENST00000441725 POLR3EQ9NVU0 708 aa7.1□□□□□ -1.27
CDC42BPA-207ENST00000441725 POTEGQ6S5H5 508 aa7.09□□□□□ -1.27
CDC42BPA-207ENST00000441725 ZNF710Q8N1W2 664 aa7.09□□□□□ -1.27
CDC42BPA-207ENST00000441725 ATP1B4Q9UN42 357 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-207ENST00000441725 RIMBP2O15034 1052 aa7.09□□□□□ -1.27
CDC42BPA-207ENST00000441725 EN1Q05925 392 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-207ENST00000441725 RAD21O60216 631 aa7.08□□□□□ -1.28
CDC42BPA-207ENST00000441725 NLRP7Q8WX94 980 aa7.08□□□□□ -1.28
CDC42BPA-207ENST00000441725 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.08□□□□□ -1.28
CDC42BPA-207ENST00000441725 CCDC97Q96F63 343 aaPredicted RBP7.08□□□□□ -1.28
CDC42BPA-207ENST00000441725 ZSWIM6Q9HCJ5 1215 aa7.08□□□□□ -1.28
CDC42BPA-207ENST00000441725 SERPINA10Q9UK55 444 aa7.08□□□□□ -1.28
CDC42BPA-207ENST00000441725 MAP3K7O43318 606 aa7.07□□□□□ -1.28
CDC42BPA-207ENST00000441725 FAM161AQ3B820 660 aa7.07□□□□□ -1.28
CDC42BPA-207ENST00000441725 FAM217BQ9NTX9 383 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-207ENST00000441725 COG6Q9Y2V7 657 aa7.07□□□□□ -1.28
CDC42BPA-207ENST00000441725 TSR1Q2NL82 804 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-207ENST00000441725 MYSM1Q5VVJ2 828 aa7.06□□□□□ -1.28
CDC42BPA-207ENST00000441725 PTCD2Q8WV60 388 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-207ENST00000441725 TRAIPQ9BWF2 469 aa7.06□□□□□ -1.28
CDC42BPA-207ENST00000441725 ANO8Q9HCE9 1232 aaPredicted RBP7.06□□□□□ -1.28
CDC42BPA-207ENST00000441725 HOXB1P14653 301 aaPredicted RBP7.06□□□□□ -1.28
CDC42BPA-207ENST00000441725 RBM33Q96EV2 1170 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-207ENST00000441725 PLSCR2Q9NRY7 297 aa7.06□□□□□ -1.28
CDC42BPA-207ENST00000441725 SPDYE5A6NIY4 337 aa7.05□□□□□ -1.28
CDC42BPA-207ENST00000441725 SLC34A2O95436 690 aa7.05□□□□□ -1.28
CDC42BPA-207ENST00000441725 MARVELD3Q96A59 401 aa7.05□□□□□ -1.28
CDC42BPA-207ENST00000441725 FBXO31Q5XUX0 539 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-207ENST00000441725 METTL3Q86U44 580 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-207ENST00000441725 KCTD17Q8N5Z5 321 aa7.05□□□□□ -1.28
CDC42BPA-207ENST00000441725 SNRKQ9NRH2 765 aa7.05□□□□□ -1.28
CDC42BPA-207ENST00000441725 PHF14O94880 888 aa7.04□□□□□ -1.28
CDC42BPA-207ENST00000441725 GPR153Q6NV75 609 aa7.04□□□□□ -1.28
CDC42BPA-207ENST00000441725 EMP3P54852 163 aa7.03□□□□□ -1.28
CDC42BPA-207ENST00000441725 EPAS1Q99814 870 aa7.03□□□□□ -1.28
CDC42BPA-207ENST00000441725 CLK2P49760 499 aaKnown RBP7.03□□□□□ -1.28
CDC42BPA-207ENST00000441725 AEBP1Q8IUX7 1158 aa7.03□□□□□ -1.28
CDC42BPA-207ENST00000441725 PCDHGA10Q9Y5H3 936 aa7.03□□□□□ -1.28
CDC42BPA-207ENST00000441725 RFC5P40937 340 aa7.02□□□□□ -1.29
CDC42BPA-207ENST00000441725 ARSIQ5FYB1 569 aa7.02□□□□□ -1.29
CDC42BPA-207ENST00000441725 RETREG2Q8NC44 543 aa7.02□□□□□ -1.29
CDC42BPA-207ENST00000441725 ZNF330Q9Y3S2 320 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPA-207ENST00000441725 PCDHGA4Q9Y5G9 962 aa7.02□□□□□ -1.29
CDC42BPA-207ENST00000441725 PXYLP1Q8TE99 480 aa7.01□□□□□ -1.29
CDC42BPA-207ENST00000441725 BANK1Q8NDB2 785 aa7□□□□□ -1.29
CDC42BPA-207ENST00000441725 KHSRPQ92945 711 aaKnown RBP eCLIP7□□□□□ -1.299e-7■■■■□ 20.3
CDC42BPA-207ENST00000441725 TBC1D2Q9BYX2 928 aa7□□□□□ -1.29
CDC42BPA-207ENST00000441725 OATP04181 439 aa6.99□□□□□ -1.29
CDC42BPA-207ENST00000441725 PADI6Q6TGC4 694 aa6.99□□□□□ -1.29
CDC42BPA-207ENST00000441725 LIMD1Q9UGP4 676 aa6.99□□□□□ -1.29
CDC42BPA-207ENST00000441725 ADGRG1Q9Y653 693 aa6.99□□□□□ -1.29
CDC42BPA-207ENST00000441725 FAM205CA6NFA0 338 aa6.98□□□□□ -1.29
CDC42BPA-207ENST00000441725 GDPD2Q9HCC8 539 aa6.98□□□□□ -1.29
CDC42BPA-207ENST00000441725 IRF5Q13568 498 aa6.98□□□□□ -1.29
CDC42BPA-207ENST00000441725 TYW1BQ6NUM6 668 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms