RNA–Protein interactions for RNA: ENST00000441679.1

EPHA4-208, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 565 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-208ENST00000441679 SLC34A2O95436 690 aa12.24□□□□□ -0.45
EPHA4-208ENST00000441679 OSBPP22059 807 aa12.24□□□□□ -0.45
EPHA4-208ENST00000441679 POTEB2H3BUK9 544 aa12.22□□□□□ -0.45
EPHA4-208ENST00000441679 GPR37O15354 613 aa12.22□□□□□ -0.45
EPHA4-208ENST00000441679 DNMBPQ6XZF7 1577 aa12.22□□□□□ -0.45
EPHA4-208ENST00000441679 TOP2BQ02880 1626 aa12.2□□□□□ -0.46
EPHA4-208ENST00000441679 TOPBP1Q92547 1522 aa12.2□□□□□ -0.46
EPHA4-208ENST00000441679 FCHSD2O94868 740 aa12.19□□□□□ -0.46
EPHA4-208ENST00000441679 KIF21AQ7Z4S6 1674 aa12.19□□□□□ -0.46
EPHA4-208ENST00000441679 SOGA1O94964 1423 aa12.19□□□□□ -0.46
EPHA4-208ENST00000441679 ERICH6Q7L0X2 663 aa12.18□□□□□ -0.46
EPHA4-208ENST00000441679 DAXXQ9UER7 740 aaPredicted RBP12.18□□□□□ -0.46
EPHA4-208ENST00000441679 MINK1Q8N4C8 1332 aaPredicted RBP12.17□□□□□ -0.46
EPHA4-208ENST00000441679 MAP2K5Q13163 448 aa12.17□□□□□ -0.46
EPHA4-208ENST00000441679 WDR62O43379 1518 aa12.16□□□□□ -0.46
EPHA4-208ENST00000441679 CUX1P39880 1505 aa12.16□□□□□ -0.46
EPHA4-208ENST00000441679 URB2Q14146 1524 aaKnown RBP12.16□□□□□ -0.46
EPHA4-208ENST00000441679 TRIM66O15016 1216 aa12.16□□□□□ -0.46
EPHA4-208ENST00000441679 GNPATO15228 680 aa12.16□□□□□ -0.46
EPHA4-208ENST00000441679 HIC1Q14526 733 aa12.16□□□□□ -0.46
EPHA4-208ENST00000441679 ANO8Q9HCE9 1232 aaPredicted RBP12.16□□□□□ -0.46
EPHA4-208ENST00000441679 EEA1Q15075 1411 aa12.16□□□□□ -0.46
EPHA4-208ENST00000441679 BIVM-ERCC5R4GMW8 1640 aa12.15□□□□□ -0.46
EPHA4-208ENST00000441679 CUX2O14529 1486 aa12.14□□□□□ -0.47
EPHA4-208ENST00000441679 PDE4DQ08499 809 aa12.14□□□□□ -0.47
EPHA4-208ENST00000441679 IFT140Q96RY7 1462 aa12.14□□□□□ -0.47
EPHA4-208ENST00000441679 PHF14O94880 888 aa12.13□□□□□ -0.47
EPHA4-208ENST00000441679 EPAS1Q99814 870 aa12.13□□□□□ -0.47
EPHA4-208ENST00000441679 KIF27Q86VH2 1401 aa12.12□□□□□ -0.47
EPHA4-208ENST00000441679 POTEJP0CG39 1038 aa12.12□□□□□ -0.47
EPHA4-208ENST00000441679 GPBP1L1Q9HC44 474 aaPredicted RBP12.12□□□□□ -0.47
EPHA4-208ENST00000441679 PCDHGA4Q9Y5G9 962 aa12.12□□□□□ -0.47
EPHA4-208ENST00000441679 FGD5Q6ZNL6 1462 aa12.12□□□□□ -0.47
EPHA4-208ENST00000441679 SYNJ1O43426 1573 aa12.11□□□□□ -0.47
EPHA4-208ENST00000441679 CCDC102AQ96A19 550 aa12.11□□□□□ -0.47
EPHA4-208ENST00000441679 POLA1P09884 1462 aaPredicted RBP12.1□□□□□ -0.47
EPHA4-208ENST00000441679 IRF6O14896 467 aa12.1□□□□□ -0.47
EPHA4-208ENST00000441679 PTGDRQ13258 359 aa12.1□□□□□ -0.47
EPHA4-208ENST00000441679 KDM4CQ9H3R0 1056 aa12.1□□□□□ -0.47
EPHA4-208ENST00000441679 PRIM1P49642 420 aaKnown RBP12.09□□□□□ -0.47
EPHA4-208ENST00000441679 EN1Q05925 392 aaPredicted RBP12.09□□□□□ -0.47
EPHA4-208ENST00000441679 TIMELESSQ9UNS1 1208 aa12.08□□□□□ -0.48
EPHA4-208ENST00000441679 THOC2Q8NI27 1593 aaKnown RBP12.08□□□□□ -0.48
EPHA4-208ENST00000441679 ABCA10Q8WWZ4 1543 aa12.07□□□□□ -0.48
EPHA4-208ENST00000441679 MAP3K7O43318 606 aa12.07□□□□□ -0.48
EPHA4-208ENST00000441679 WDR97A6NE52 1622 aa12.07□□□□□ -0.48
EPHA4-208ENST00000441679 TYW1BQ6NUM6 668 aa12.06□□□□□ -0.48
EPHA4-208ENST00000441679 SLAIN1Q8ND83 568 aa12.05□□□□□ -0.48
EPHA4-208ENST00000441679 OTUD5Q96G74 571 aa12.05□□□□□ -0.48
EPHA4-208ENST00000441679 FECHP22830 423 aa12.04□□□□□ -0.48
EPHA4-208ENST00000441679 AMHR2Q16671 573 aa12.04□□□□□ -0.48
EPHA4-208ENST00000441679 DOK7Q18PE1 504 aa12.04□□□□□ -0.48
EPHA4-208ENST00000441679 FBXW7Q969H0 707 aa12.04□□□□□ -0.48
EPHA4-208ENST00000441679 RBM33Q96EV2 1170 aaKnown RBP12.04□□□□□ -0.48
EPHA4-208ENST00000441679 PCDHGA10Q9Y5H3 936 aa12.04□□□□□ -0.48
EPHA4-208ENST00000441679 JPH4Q96JJ6 628 aa12.03□□□□□ -0.48
EPHA4-208ENST00000441679 RIMBP2O15034 1052 aa12.02□□□□□ -0.49
EPHA4-208ENST00000441679 IL27Q8NEV9 243 aa12.02□□□□□ -0.49
EPHA4-208ENST00000441679 CDHR5Q9HBB8 845 aa12.02□□□□□ -0.49
EPHA4-208ENST00000441679 RAD54L2Q9Y4B4 1467 aa12.02□□□□□ -0.49
EPHA4-208ENST00000441679 TDRD9Q8NDG6 1382 aaKnown RBP12.01□□□□□ -0.49
EPHA4-208ENST00000441679 GAPVD1Q14C86 1478 aa12.01□□□□□ -0.49
EPHA4-208ENST00000441679 SCUBE2Q9NQ36 999 aa12□□□□□ -0.49
EPHA4-208ENST00000441679 IGF1RP08069 1367 aa11.99□□□□□ -0.49
EPHA4-208ENST00000441679 TARBP1Q13395 1621 aaKnown RBP11.98□□□□□ -0.49
EPHA4-208ENST00000441679 GRIN2BQ13224 1484 aa11.98□□□□□ -0.49
EPHA4-208ENST00000441679 KDM4FA0A1W2PPD8 638 aa11.98□□□□□ -0.49
EPHA4-208ENST00000441679 TTLL12Q14166 644 aaPredicted RBP11.98□□□□□ -0.49
EPHA4-208ENST00000441679 MAMSTRQ6ZN01 415 aa11.98□□□□□ -0.49
EPHA4-208ENST00000441679 C14orf37Q86TY3 774 aa11.98□□□□□ -0.49
EPHA4-208ENST00000441679 FAM9AQ8IZU1 332 aaPredicted RBP11.98□□□□□ -0.49
EPHA4-208ENST00000441679 ZSWIM6Q9HCJ5 1215 aa11.98□□□□□ -0.49
EPHA4-208ENST00000441679 NPDC1Q9NQX5 325 aaPredicted RBP11.98□□□□□ -0.49
EPHA4-208ENST00000441679 FOSBP53539 338 aa11.97□□□□□ -0.49
EPHA4-208ENST00000441679 TSR1Q2NL82 804 aaKnown RBP11.97□□□□□ -0.49
EPHA4-208ENST00000441679 PARP9Q8IXQ6 854 aa11.97□□□□□ -0.49
EPHA4-208ENST00000441679 DDRGK1Q96HY6 314 aa11.97□□□□□ -0.49
EPHA4-208ENST00000441679 ERICH3Q5RHP9 1530 aa11.96□□□□□ -0.49
EPHA4-208ENST00000441679 CARMIL1Q5VZK9 1371 aa11.96□□□□□ -0.49
EPHA4-208ENST00000441679 CERKQ8TCT0 537 aa11.96□□□□□ -0.49
EPHA4-208ENST00000441679 CHMP7Q8WUX9 453 aaPredicted RBP11.96□□□□□ -0.49
EPHA4-208ENST00000441679 NUDT7P0C024 238 aa11.95□□□□□ -0.5
EPHA4-208ENST00000441679 ZNF454Q8N9F8 522 aa11.95□□□□□ -0.5
EPHA4-208ENST00000441679 AQRO60306 1485 aaKnown RBP eCLIP11.95□□□□□ -0.5
EPHA4-208ENST00000441679 ARSIQ5FYB1 569 aa11.94□□□□□ -0.5
EPHA4-208ENST00000441679 ZNF710Q8N1W2 664 aa11.94□□□□□ -0.5
EPHA4-208ENST00000441679 ZDHHC16Q969W1 377 aa11.94□□□□□ -0.5
EPHA4-208ENST00000441679 HOXB3P14651 431 aaPredicted RBP11.93□□□□□ -0.5
EPHA4-208ENST00000441679 FAM117AQ9C073 453 aa11.93□□□□□ -0.5
EPHA4-208ENST00000441679 UBTFP17480 764 aaKnown RBP11.92□□□□□ -0.5
EPHA4-208ENST00000441679 FHAD1B1AJZ9 1412 aa11.92□□□□□ -0.5
EPHA4-208ENST00000441679 MAGI1Q96QZ7 1491 aaPredicted RBP11.91□□□□□ -0.5
EPHA4-208ENST00000441679 C6orf132Q5T0Z8 1188 aa11.91□□□□□ -0.5
EPHA4-208ENST00000441679 KHSRPQ92945 711 aaKnown RBP eCLIP11.9□□□□□ -0.5
EPHA4-208ENST00000441679 ZNF608Q9ULD9 1512 aaPredicted RBP11.9□□□□□ -0.5
EPHA4-208ENST00000441679 RAPGEF2Q9Y4G8 1499 aa11.89□□□□□ -0.51
EPHA4-208ENST00000441679 GPR153Q6NV75 609 aa11.89□□□□□ -0.51
EPHA4-208ENST00000441679 CUL7Q14999 1698 aa11.88□□□□□ -0.51
EPHA4-208ENST00000441679 CLCN1P35523 988 aa11.88□□□□□ -0.51
EPHA4-208ENST00000441679 GIGYF2Q6Y7W6 1299 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms