RNA–Protein interactions for RNA: ENST00000441549.7

PDPK1-204, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-204ENST00000441549 MIER1Q8N108 512 aa34.1■■■■□ 3.05
PDPK1-204ENST00000441549 MYT1LQ9UL68 1186 aa34.1■■■■□ 3.05
PDPK1-204ENST00000441549 MLH3Q9UHC1 1453 aa34.09■■■■□ 3.05
PDPK1-204ENST00000441549 ATP10AO60312 1499 aa34.08■■■■□ 3.05
PDPK1-204ENST00000441549 NBPF8Q3BBV2 869 aa34.06■■■■□ 3.04
PDPK1-204ENST00000441549 CCDC144AA2RUR9 1427 aa34.05■■■■□ 3.04
PDPK1-204ENST00000441549 PLA2R1Q13018 1463 aa34.04■■■■□ 3.04
PDPK1-204ENST00000441549 HECW2Q9P2P5 1572 aa34.03■■■■□ 3.04
PDPK1-204ENST00000441549 DNAJC5Q9H3Z4 198 aa34.02■■■■□ 3.04
PDPK1-204ENST00000441549 VWDEQ8N2E2 1590 aa34.02■■■■□ 3.04
PDPK1-204ENST00000441549 KANK1Q14678 1352 aa34.01■■■■□ 3.03
PDPK1-204ENST00000441549 UHRF1BP1Q6BDS2 1440 aa34.01■■■■□ 3.03
PDPK1-204ENST00000441549 EIF4G2P78344 907 aaKnown RBP eCLIP34■■■■□ 3.03
PDPK1-204ENST00000441549 DIP2BQ9P265 1576 aa34■■■■□ 3.03
PDPK1-204ENST00000441549 A2MP01023 1474 aa33.99■■■■□ 3.03
PDPK1-204ENST00000441549 PRDM15P57071 1507 aaPredicted RBP33.99■■■■□ 3.03
PDPK1-204ENST00000441549 HIRIP3Q9BW71 556 aaPredicted RBP33.99■■■■□ 3.03
PDPK1-204ENST00000441549 KIF3BO15066 747 aa33.97■■■■□ 3.03
PDPK1-204ENST00000441549 HSPA5P11021 654 aaKnown RBP33.96■■■■□ 3.03
PDPK1-204ENST00000441549 TET3O43151 1660 aa33.95■■■■□ 3.03
PDPK1-204ENST00000441549 E9PCH4 1651 aa33.94■■■■□ 3.02
PDPK1-204ENST00000441549 MROH1Q8NDA8 1641 aa33.93■■■■□ 3.02
PDPK1-204ENST00000441549 FAM69CQ0P6D2 419 aa33.92■■■■□ 3.02
PDPK1-204ENST00000441549 RNF17Q9BXT8 1623 aaKnown RBP33.9■■■■□ 3.02
PDPK1-204ENST00000441549 RICTORQ6R327 1708 aa33.89■■■■□ 3.02
PDPK1-204ENST00000441549 DDX10Q13206 875 aaKnown RBP33.89■■■■□ 3.02
PDPK1-204ENST00000441549 BCORL1Q5H9F3 1711 aa33.88■■■■□ 3.01
PDPK1-204ENST00000441549 ABCA6Q8N139 1617 aa33.87■■■■□ 3.01
PDPK1-204ENST00000441549 PTPRTO14522 1441 aa33.87■■■■□ 3.01
PDPK1-204ENST00000441549 FRMPD1Q5SYB0 1578 aa33.87■■■■□ 3.01
PDPK1-204ENST00000441549 RALGAPBQ86X10 1494 aa33.86■■■■□ 3.01
PDPK1-204ENST00000441549 RAPGEF3O95398 923 aa33.85■■■■□ 3.01
PDPK1-204ENST00000441549 TRPM2O94759 1503 aa33.85■■■■□ 3.01
PDPK1-204ENST00000441549 SPATA31E1Q6ZUB1 1445 aa33.85■■■■□ 3.01
PDPK1-204ENST00000441549 LMTK2Q8IWU2 1503 aa33.85■■■■□ 3.01
PDPK1-204ENST00000441549 DCAF11Q8TEB1 546 aa33.83■■■■□ 3.01
PDPK1-204ENST00000441549 SPHKAPQ2M3C7 1700 aa33.82■■■■□ 3
PDPK1-204ENST00000441549 DIP2CQ9Y2E4 1556 aa33.79■■■■□ 3
PDPK1-204ENST00000441549 ZNF326Q5BKZ1 582 aaKnown RBP33.79■■■■□ 3
PDPK1-204ENST00000441549 PPRC1Q5VV67 1664 aaKnown RBP33.77■■■■□ 3
PDPK1-204ENST00000441549 EFCAB6Q5THR3 1501 aa33.77■■■■□ 3
PDPK1-204ENST00000441549 KDM2AQ9Y2K7 1162 aa33.76■■■□□ 2.99
PDPK1-204ENST00000441549 ZMYM4Q5VZL5 1548 aa33.75■■■□□ 2.99
PDPK1-204ENST00000441549 PRAG1Q86YV5 1406 aa33.73■■■□□ 2.99
PDPK1-204ENST00000441549 WASHC2AQ641Q2 1341 aa33.72■■■□□ 2.99
PDPK1-204ENST00000441549 CEP152O94986 1710 aa33.71■■■□□ 2.99
PDPK1-204ENST00000441549 RGL3Q3MIN7 710 aa33.71■■■□□ 2.99
PDPK1-204ENST00000441549 USP47Q96K76 1375 aa33.71■■■□□ 2.99
PDPK1-204ENST00000441549 NEURL4Q96JN8 1562 aa33.69■■■□□ 2.98
PDPK1-204ENST00000441549 CLTCL1P53675 1640 aa33.68■■■□□ 2.98
PDPK1-204ENST00000441549 TSPOAP1O95153 1857 aa33.68■■■□□ 2.98
PDPK1-204ENST00000441549 TRPM1Q7Z4N2 1603 aa33.66■■■□□ 2.98
PDPK1-204ENST00000441549 POLR1AO95602 1720 aaPredicted RBP33.65■■■□□ 2.98
PDPK1-204ENST00000441549 STAC3Q96MF2 364 aa33.65■■■□□ 2.98
PDPK1-204ENST00000441549 CARD11Q9BXL7 1154 aa33.65■■■□□ 2.98
PDPK1-204ENST00000441549 CCDC7Q96M83 1385 aa33.65■■■□□ 2.98
PDPK1-204ENST00000441549 KIF13AQ9H1H9 1805 aa33.64■■■□□ 2.98
PDPK1-204ENST00000441549 YEATS2Q9ULM3 1422 aa33.64■■■□□ 2.98
PDPK1-204ENST00000441549 CENPBP07199 599 aaPredicted RBP33.63■■■□□ 2.97
PDPK1-204ENST00000441549 GGT6Q6P531 493 aa33.63■■■□□ 2.97
PDPK1-204ENST00000441549 ABCC3O15438 1527 aa33.6■■■□□ 2.97
PDPK1-204ENST00000441549 ROCK2O75116 1388 aaKnown RBP33.6■■■□□ 2.97
PDPK1-204ENST00000441549 C11orf95C9JLR9 678 aaPredicted RBP33.59■■■□□ 2.97
PDPK1-204ENST00000441549 GPRASP1Q5JY77 1395 aa33.58■■■□□ 2.97
PDPK1-204ENST00000441549 ANP32CO43423 234 aa33.58■■■□□ 2.97
PDPK1-204ENST00000441549 LAMC1P11047 1609 aa33.58■■■□□ 2.97
PDPK1-204ENST00000441549 WASHC2CQ9Y4E1 1318 aa33.56■■■□□ 2.96
PDPK1-204ENST00000441549 NPATQ14207 1427 aa33.56■■■□□ 2.96
PDPK1-204ENST00000441549 ARID4BQ4LE39 1312 aaPredicted RBP33.55■■■□□ 2.96
PDPK1-204ENST00000441549 ZC3H13Q5T200 1668 aaKnown RBP33.54■■■□□ 2.96
PDPK1-204ENST00000441549 KIF7Q2M1P5 1343 aa33.53■■■□□ 2.96
PDPK1-204ENST00000441549 REREQ9P2R6 1566 aa33.53■■■□□ 2.96
PDPK1-204ENST00000441549 CNTLNQ9NXG0 1405 aa33.52■■■□□ 2.96
PDPK1-204ENST00000441549 CAMSAP1Q5T5Y3 1602 aa33.52■■■□□ 2.96
PDPK1-204ENST00000441549 KIF1BO60333 1816 aa33.5■■■□□ 2.95
PDPK1-204ENST00000441549 YTHDC1Q96MU7 727 aaKnown RBP33.5■■■□□ 2.95
PDPK1-204ENST00000441549 MADDQ8WXG6 1647 aa33.49■■■□□ 2.95
PDPK1-204ENST00000441549 ARHGAP31Q2M1Z3 1444 aa33.48■■■□□ 2.95
PDPK1-204ENST00000441549 CCER2I3L3R5 266 aa33.48■■■□□ 2.95
PDPK1-204ENST00000441549 UGGT1Q9NYU2 1555 aa33.47■■■□□ 2.95
PDPK1-204ENST00000441549 AGLP35573 1532 aa33.45■■■□□ 2.95
PDPK1-204ENST00000441549 NBPF1Q3BBV0 1214 aa33.45■■■□□ 2.94
PDPK1-204ENST00000441549 ST20-MTHFSA0A0A6YYL1 179 aa33.42■■■□□ 2.94
PDPK1-204ENST00000441549 NOS1P29475 1434 aa33.42■■■□□ 2.94
PDPK1-204ENST00000441549 MYOM2P54296 1465 aa33.41■■■□□ 2.94
PDPK1-204ENST00000441549 ADGRB3O60242 1522 aa33.4■■■□□ 2.94
PDPK1-204ENST00000441549 COL17A1Q9UMD9 1497 aaPredicted RBP33.38■■■□□ 2.93
PDPK1-204ENST00000441549 PPP6R1Q9UPN7 881 aa33.37■■■□□ 2.93
PDPK1-204ENST00000441549 IFT172Q9UG01 1749 aa33.36■■■□□ 2.93
PDPK1-204ENST00000441549 MROH2AA6NES4 1674 aa33.36■■■□□ 2.93
PDPK1-204ENST00000441549 KIAA1210Q9ULL0 1709 aa33.35■■■□□ 2.93
PDPK1-204ENST00000441549 SIGLEC1Q9BZZ2 1709 aa33.35■■■□□ 2.93
PDPK1-204ENST00000441549 ARHGEF40Q8TER5 1519 aa33.33■■■□□ 2.93
PDPK1-204ENST00000441549 PIK3C2BO00750 1634 aa33.32■■■□□ 2.93
PDPK1-204ENST00000441549 CFAP65Q6ZU64 1925 aaKnown RBP33.31■■■□□ 2.92
PDPK1-204ENST00000441549 SYNMO15061 1565 aa33.3■■■□□ 2.92
PDPK1-204ENST00000441549 NRXN1Q9ULB1 1477 aa33.29■■■□□ 2.92
PDPK1-204ENST00000441549 RPGRIP1LQ68CZ1 1315 aa33.28■■■□□ 2.92
PDPK1-204ENST00000441549 IQGAP1P46940 1657 aa33.26■■■□□ 2.91
PDPK1-204ENST00000441549 SLC52A1Q9NWF4 448 aa33.23■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms