RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 MAP7D2Q96T17 732 aa18.25■□□□□ 0.51
PCNX1-202ENST00000439984 GOLGA6L1Q8N7Z2 621 aa18.24■□□□□ 0.51
PCNX1-202ENST00000439984 PHF14O94880 888 aa18.24■□□□□ 0.51
PCNX1-202ENST00000439984 MPHOSPH9Q99550 1183 aa18.24■□□□□ 0.51
PCNX1-202ENST00000439984 TULP1O00294 542 aaPredicted RBP18.24■□□□□ 0.51
PCNX1-202ENST00000439984 L3MBTL2Q969R5 705 aa18.24■□□□□ 0.51
PCNX1-202ENST00000439984 PLEKHG5O94827 1062 aa18.23■□□□□ 0.51
PCNX1-202ENST00000439984 CENPJQ9HC77 1338 aaPredicted RBP18.22■□□□□ 0.51
PCNX1-202ENST00000439984 CFAP44Q96MT7 982 aa18.22■□□□□ 0.51
PCNX1-202ENST00000439984 RAD54L2Q9Y4B4 1467 aa18.22■□□□□ 0.51
PCNX1-202ENST00000439984 NASPP49321 788 aaPredicted RBP18.22■□□□□ 0.51
PCNX1-202ENST00000439984 TRAK2O60296 914 aa18.22■□□□□ 0.51
PCNX1-202ENST00000439984 NLRP13Q86W25 1043 aa18.21■□□□□ 0.51
PCNX1-202ENST00000439984 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
PCNX1-202ENST00000439984 MORC1Q86VD1 984 aa18.2■□□□□ 0.5
PCNX1-202ENST00000439984 BCL2L13Q9BXK5 485 aa18.2■□□□□ 0.5
PCNX1-202ENST00000439984 SMC4Q9NTJ3 1288 aa18.2■□□□□ 0.5
PCNX1-202ENST00000439984 COG6Q9Y2V7 657 aa18.19■□□□□ 0.5
PCNX1-202ENST00000439984 IPO8O15397 1037 aaKnown RBP18.19■□□□□ 0.5
PCNX1-202ENST00000439984 MTERF4Q7Z6M4 381 aaKnown RBP18.18■□□□□ 0.5
PCNX1-202ENST00000439984 KIAA1211Q6ZU35 1233 aa18.18■□□□□ 0.5
PCNX1-202ENST00000439984 PRDM10Q9NQV6 1147 aa18.17■□□□□ 0.5
PCNX1-202ENST00000439984 ST18O60284 1047 aa18.17■□□□□ 0.5
PCNX1-202ENST00000439984 PKD2Q13563 968 aa18.17■□□□□ 0.5
PCNX1-202ENST00000439984 APPP05067 770 aa18.17■□□□□ 0.5
PCNX1-202ENST00000439984 MCTP1Q6DN14 999 aa18.16■□□□□ 0.5
PCNX1-202ENST00000439984 CCAR2Q8N163 923 aaKnown RBP18.16■□□□□ 0.5
PCNX1-202ENST00000439984 MYBBP1AQ9BQG0 1328 aaKnown RBP18.15■□□□□ 0.5
PCNX1-202ENST00000439984 PHLDB1Q86UU1 1377 aa18.15■□□□□ 0.5
PCNX1-202ENST00000439984 TOP2BQ02880 1626 aa18.14■□□□□ 0.49
PCNX1-202ENST00000439984 RNF214Q8ND24 703 aa18.14■□□□□ 0.49
PCNX1-202ENST00000439984 SETQ01105 290 aaPredicted RBP18.14■□□□□ 0.49
PCNX1-202ENST00000439984 NOC3LQ8WTT2 800 aaKnown RBP18.14■□□□□ 0.49
PCNX1-202ENST00000439984 BACH2Q9BYV9 841 aa18.14■□□□□ 0.49
PCNX1-202ENST00000439984 BICRAQ9NZM4 1560 aa18.13■□□□□ 0.49
PCNX1-202ENST00000439984 CFTRP13569 1480 aa18.13■□□□□ 0.49
PCNX1-202ENST00000439984 HTATSF1O43719 755 aaKnown RBP18.13■□□□□ 0.49
PCNX1-202ENST00000439984 ERICH3Q5RHP9 1530 aa18.13■□□□□ 0.49
PCNX1-202ENST00000439984 PLPPR3Q6T4P5 718 aa18.13■□□□□ 0.49
PCNX1-202ENST00000439984 ROCK2O75116 1388 aaKnown RBP18.12■□□□□ 0.49
PCNX1-202ENST00000439984 GNL2Q13823 731 aaKnown RBP18.12■□□□□ 0.49
PCNX1-202ENST00000439984 AKNAQ7Z591 1439 aa18.12■□□□□ 0.49
PCNX1-202ENST00000439984 PRXQ9BXM0 1461 aa18.12■□□□□ 0.49
PCNX1-202ENST00000439984 TRIM6-TRIM34B2RNG4 842 aa18.12■□□□□ 0.49
PCNX1-202ENST00000439984 U2AF1L5P0DN76 240 aaPredicted RBP18.12■□□□□ 0.49
PCNX1-202ENST00000439984 U2AF1Q01081 240 aaKnown RBP eCLIP18.12■□□□□ 0.497e-6■■■□□ 18.2
PCNX1-202ENST00000439984 UQCRHLA0A096LP55 91 aa18.11■□□□□ 0.49
PCNX1-202ENST00000439984 UQCRHP07919 91 aa18.11■□□□□ 0.49
PCNX1-202ENST00000439984 RRP7AQ9Y3A4 280 aaKnown RBP18.11■□□□□ 0.49
PCNX1-202ENST00000439984 CUX1P39880 1505 aa18.11■□□□□ 0.49
PCNX1-202ENST00000439984 KIF15Q9NS87 1388 aa18.1■□□□□ 0.49
PCNX1-202ENST00000439984 TEX35Q5T0J7 233 aa18.1■□□□□ 0.49
PCNX1-202ENST00000439984 ESPNB1AK53 854 aa18.1■□□□□ 0.49
PCNX1-202ENST00000439984 KIF16BQ96L93 1317 aa18.1■□□□□ 0.49
PCNX1-202ENST00000439984 HSP90B1P14625 803 aaKnown RBP18.1■□□□□ 0.49
PCNX1-202ENST00000439984 POGKQ9P215 609 aa18.09■□□□□ 0.49
PCNX1-202ENST00000439984 TPM4P67936 248 aa18.09■□□□□ 0.49
PCNX1-202ENST00000439984 CCDC39Q9UFE4 941 aa18.09■□□□□ 0.49
PCNX1-202ENST00000439984 LRRC9Q6ZRR7 1453 aa18.08■□□□□ 0.49
PCNX1-202ENST00000439984 C22orf23Q9BZE7 217 aa18.08■□□□□ 0.49
PCNX1-202ENST00000439984 GRPEL1Q9HAV7 217 aa18.08■□□□□ 0.49
PCNX1-202ENST00000439984 ANKRD45Q5TZF3 282 aa18.08■□□□□ 0.49
PCNX1-202ENST00000439984 C14orf37Q86TY3 774 aa18.08■□□□□ 0.48
PCNX1-202ENST00000439984 CHMP3Q9Y3E7 222 aa18.07■□□□□ 0.48
PCNX1-202ENST00000439984 MPNDQ8N594 471 aa18.07■□□□□ 0.48
PCNX1-202ENST00000439984 CCDC173Q0VFZ6 552 aa18.06■□□□□ 0.48
PCNX1-202ENST00000439984 CARMIL2Q6F5E8 1435 aa18.06■□□□□ 0.48
PCNX1-202ENST00000439984 CAVIN1Q6NZI2 390 aaKnown RBP18.06■□□□□ 0.48
PCNX1-202ENST00000439984 IFT57Q9NWB7 429 aa18.06■□□□□ 0.48
PCNX1-202ENST00000439984 CCDC18Q5T9S5 1454 aa18.06■□□□□ 0.48
PCNX1-202ENST00000439984 CCDC66A2RUB6 948 aa18.05■□□□□ 0.48
PCNX1-202ENST00000439984 GAPVD1Q14C86 1478 aa18.05■□□□□ 0.48
PCNX1-202ENST00000439984 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.05■□□□□ 0.48
PCNX1-202ENST00000439984 ZHX1Q9UKY1 873 aaPredicted RBP18.05■□□□□ 0.48
PCNX1-202ENST00000439984 NUP155O75694 1391 aa18.04■□□□□ 0.48
PCNX1-202ENST00000439984 GOLGA6L19H0YKK7 550 aa18.04■□□□□ 0.48
PCNX1-202ENST00000439984 CGNL1Q0VF96 1302 aa18.03■□□□□ 0.48
PCNX1-202ENST00000439984 RRBP1Q9P2E9 1410 aaKnown RBP18.03■□□□□ 0.48
PCNX1-202ENST00000439984 DIAPH3Q9NSV4 1193 aa18.03■□□□□ 0.48
PCNX1-202ENST00000439984 ESF1Q9H501 851 aaKnown RBP18.02■□□□□ 0.48
PCNX1-202ENST00000439984 HNRNPMP52272 730 aaKnown RBP eCLIP18.01■□□□□ 0.471e-6■■■■□ 22.8
PCNX1-202ENST00000439984 FGD6Q6ZV73 1430 aa18.01■□□□□ 0.47
PCNX1-202ENST00000439984 PATL2C9JE40 543 aaKnown RBP18.01■□□□□ 0.47
PCNX1-202ENST00000439984 BECN2A8MW95 431 aa18■□□□□ 0.47
PCNX1-202ENST00000439984 GPS2Q13227 327 aa18■□□□□ 0.47
PCNX1-202ENST00000439984 ST20-MTHFSA0A0A6YYL1 179 aa18■□□□□ 0.47
PCNX1-202ENST00000439984 ANKRD30AQ9BXX3 1397 aa18■□□□□ 0.47
PCNX1-202ENST00000439984 CDCA7LQ96GN5 454 aa18■□□□□ 0.47
PCNX1-202ENST00000439984 CREBRFQ8IUR6 639 aa18■□□□□ 0.47
PCNX1-202ENST00000439984 UNC13AQ9UPW8 1703 aa18■□□□□ 0.47
PCNX1-202ENST00000439984 SAFB2Q14151 953 aaKnown RBP eCLIP17.99■□□□□ 0.47
PCNX1-202ENST00000439984 JPH4Q96JJ6 628 aa17.99■□□□□ 0.47
PCNX1-202ENST00000439984 HMGXB3Q12766 1538 aa17.99■□□□□ 0.47
PCNX1-202ENST00000439984 NESP48681 1621 aa17.99■□□□□ 0.47
PCNX1-202ENST00000439984 HOMER1Q86YM7 354 aa17.98■□□□□ 0.47
PCNX1-202ENST00000439984 SKAP1Q86WV1 359 aa17.98■□□□□ 0.47
PCNX1-202ENST00000439984 PANK3Q9H999 370 aa17.98■□□□□ 0.47
PCNX1-202ENST00000439984 CBX1P83916 185 aa17.98■□□□□ 0.47
PCNX1-202ENST00000439984 NOM1Q5C9Z4 860 aaKnown RBP17.97■□□□□ 0.47
PCNX1-202ENST00000439984 NPHP1O15259 732 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms