RNA–Protein interactions for RNA: ENST00000439601.1

LINC01237-204, Transcript of long intergenic non-protein coding RNA 1237, humanhuman

TSL 4

Gene LINC01237, Length 569 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01237-204ENST00000439601 PCDHGA10Q9Y5H3 936 aa10.98□□□□□ -0.65
LINC01237-204ENST00000439601 EPAS1Q99814 870 aa10.97□□□□□ -0.65
LINC01237-204ENST00000439601 PTPREP23469 700 aa10.96□□□□□ -0.65
LINC01237-204ENST00000439601 TYW1BQ6NUM6 668 aa10.96□□□□□ -0.65
LINC01237-204ENST00000439601 PSEN2P49810 448 aa10.95□□□□□ -0.66
LINC01237-204ENST00000439601 SLC4A5Q9BY07 1137 aa10.95□□□□□ -0.66
LINC01237-204ENST00000439601 MROH2BQ7Z745 1585 aa10.94□□□□□ -0.66
LINC01237-204ENST00000439601 ADGRD1Q6QNK2 874 aa10.94□□□□□ -0.66
LINC01237-204ENST00000439601 ARHGEF1Q92888 912 aaKnown RBP10.94□□□□□ -0.66
LINC01237-204ENST00000439601 KCNK17Q96T54 332 aa10.94□□□□□ -0.66
LINC01237-204ENST00000439601 ADAM33Q9BZ11 813 aa10.94□□□□□ -0.66
LINC01237-204ENST00000439601 SMARCA4P51532 1647 aa10.94□□□□□ -0.66
LINC01237-204ENST00000439601 CECR2Q9BXF3 1484 aa10.93□□□□□ -0.66
LINC01237-204ENST00000439601 DMRTA1Q5VZB9 504 aa10.92□□□□□ -0.66
LINC01237-204ENST00000439601 P3H3Q8IVL6 736 aa10.91□□□□□ -0.66
LINC01237-204ENST00000439601 MYT1LQ9UL68 1186 aa10.91□□□□□ -0.66
LINC01237-204ENST00000439601 BICRAQ9NZM4 1560 aa10.9□□□□□ -0.67
LINC01237-204ENST00000439601 HRO43593 1189 aa10.89□□□□□ -0.67
LINC01237-204ENST00000439601 PPP1R3GB7ZBB8 358 aa10.88□□□□□ -0.67
LINC01237-204ENST00000439601 KCNV2Q8TDN2 545 aa10.88□□□□□ -0.67
LINC01237-204ENST00000439601 DDX12PQ92771 950 aa10.88□□□□□ -0.67
LINC01237-204ENST00000439601 WIZO95785 1651 aa10.88□□□□□ -0.67
LINC01237-204ENST00000439601 TOP2AP11388 1531 aaKnown RBP10.88□□□□□ -0.67
LINC01237-204ENST00000439601 HAP1P54257 671 aaPredicted RBP10.87□□□□□ -0.67
LINC01237-204ENST00000439601 RNF166Q96A37 237 aaPredicted RBP10.87□□□□□ -0.67
LINC01237-204ENST00000439601 ZBED2Q9BTP6 218 aa10.87□□□□□ -0.67
LINC01237-204ENST00000439601 VPS9D1Q9Y2B5 631 aa10.87□□□□□ -0.67
LINC01237-204ENST00000439601 EN1Q05925 392 aaPredicted RBP10.85□□□□□ -0.67
LINC01237-204ENST00000439601 C6orf132Q5T0Z8 1188 aa10.85□□□□□ -0.67
LINC01237-204ENST00000439601 PEG3Q9GZU2 1588 aa10.85□□□□□ -0.67
LINC01237-204ENST00000439601 NBR1Q14596 966 aa10.84□□□□□ -0.67
LINC01237-204ENST00000439601 BHMG1C9JSJ3 638 aaPredicted RBP10.81□□□□□ -0.68
LINC01237-204ENST00000439601 ONECUT3O60422 494 aaPredicted RBP10.81□□□□□ -0.68
LINC01237-204ENST00000439601 COL9A1P20849 921 aa10.8□□□□□ -0.68
LINC01237-204ENST00000439601 VSIG10Q8N0Z9 540 aa10.8□□□□□ -0.68
LINC01237-204ENST00000439601 SMARCA2P51531 1590 aa10.8□□□□□ -0.68
LINC01237-204ENST00000439601 GRXCR2A6NFK2 248 aa10.79□□□□□ -0.68
LINC01237-204ENST00000439601 MAP3K7O43318 606 aa10.79□□□□□ -0.68
LINC01237-204ENST00000439601 OSBPP22059 807 aa10.79□□□□□ -0.68
LINC01237-204ENST00000439601 RBM33Q96EV2 1170 aaKnown RBP10.79□□□□□ -0.68
LINC01237-204ENST00000439601 STAC3Q96MF2 364 aa10.79□□□□□ -0.68
LINC01237-204ENST00000439601 CERKQ8TCT0 537 aa10.78□□□□□ -0.68
LINC01237-204ENST00000439601 RABGEF1Q9UJ41 708 aa10.78□□□□□ -0.68
LINC01237-204ENST00000439601 NBPF3Q9H094 633 aa10.76□□□□□ -0.69
LINC01237-204ENST00000439601 KDM2AQ9Y2K7 1162 aa10.76□□□□□ -0.69
LINC01237-204ENST00000439601 TSR1Q2NL82 804 aaKnown RBP10.74□□□□□ -0.69
LINC01237-204ENST00000439601 PRIM1P49642 420 aaKnown RBP10.73□□□□□ -0.69
LINC01237-204ENST00000439601 MRPL50Q8N5N7 158 aaKnown RBP10.73□□□□□ -0.69
LINC01237-204ENST00000439601 TRIM6-TRIM34B2RNG4 842 aa10.72□□□□□ -0.69
LINC01237-204ENST00000439601 PROX2Q3B8N5 592 aa10.72□□□□□ -0.69
LINC01237-204ENST00000439601 MLLT3P42568 568 aaPredicted RBP10.71□□□□□ -0.69
LINC01237-204ENST00000439601 LAPTM4BQ86VI4 370 aa10.71□□□□□ -0.69
LINC01237-204ENST00000439601 RBM27Q9P2N5 1060 aaKnown RBP10.7□□□□□ -0.7
LINC01237-204ENST00000439601 BAZ1BQ9UIG0 1483 aaKnown RBP10.69□□□□□ -0.7
LINC01237-204ENST00000439601 KIAA1468Q9P260 1216 aa10.69□□□□□ -0.7
LINC01237-204ENST00000439601 HCSTQ9UBK5 93 aa10.69□□□□□ -0.7
LINC01237-204ENST00000439601 CCDC88BA6NC98 1476 aa10.68□□□□□ -0.7
LINC01237-204ENST00000439601 ATAD2BQ9ULI0 1458 aa10.68□□□□□ -0.7
LINC01237-204ENST00000439601 PRSS12P56730 875 aa10.68□□□□□ -0.7
LINC01237-204ENST00000439601 SEMA3EO15041 775 aa10.67□□□□□ -0.7
LINC01237-204ENST00000439601 PACS2Q86VP3 889 aa10.67□□□□□ -0.7
LINC01237-204ENST00000439601 CDCA7LQ96GN5 454 aa10.67□□□□□ -0.7
LINC01237-204ENST00000439601 EIF4G1Q04637 1599 aaKnown RBP10.67□□□□□ -0.7
LINC01237-204ENST00000439601 GOLGA8CPA6NN73 597 aa10.66□□□□□ -0.7
LINC01237-204ENST00000439601 KCTD12Q96CX2 325 aaKnown RBP10.66□□□□□ -0.7
LINC01237-204ENST00000439601 HMGXB3Q12766 1538 aa10.65□□□□□ -0.7
LINC01237-204ENST00000439601 TESPA1A2RU30 521 aaPredicted RBP10.65□□□□□ -0.7
LINC01237-204ENST00000439601 CDHR5Q9HBB8 845 aa10.65□□□□□ -0.7
LINC01237-204ENST00000439601 NPDC1Q9NQX5 325 aaPredicted RBP10.65□□□□□ -0.7
LINC01237-204ENST00000439601 TSKSQ9UJT2 592 aa10.65□□□□□ -0.7
LINC01237-204ENST00000439601 SMYD5Q6GMV2 418 aa10.64□□□□□ -0.71
LINC01237-204ENST00000439601 WNT2BQ93097 391 aa10.63□□□□□ -0.71
LINC01237-204ENST00000439601 FAM98CQ17RN3 349 aaKnown RBP10.62□□□□□ -0.71
LINC01237-204ENST00000439601 THSD4Q6ZMP0 1018 aa10.62□□□□□ -0.71
LINC01237-204ENST00000439601 TTC13Q8NBP0 860 aa10.62□□□□□ -0.71
LINC01237-204ENST00000439601 NCAPD3P42695 1498 aa10.61□□□□□ -0.71
LINC01237-204ENST00000439601 ANKK1Q8NFD2 765 aa10.6□□□□□ -0.71
LINC01237-204ENST00000439601 ZFRQ96KR1 1074 aaKnown RBP10.6□□□□□ -0.71
LINC01237-204ENST00000439601 NBPF26B4DH59 902 aa10.59□□□□□ -0.71
LINC01237-204ENST00000439601 PTGDRQ13258 359 aa10.59□□□□□ -0.71
LINC01237-204ENST00000439601 FAM198AQ9UFP1 575 aa10.59□□□□□ -0.71
LINC01237-204ENST00000439601 EEA1Q15075 1411 aa10.58□□□□□ -0.72
LINC01237-204ENST00000439601 SEPT9Q9UHD8 586 aaPredicted RBP10.58□□□□□ -0.72
LINC01237-204ENST00000439601 SOWAHBA6NEL2 793 aa10.57□□□□□ -0.72
LINC01237-204ENST00000439601 TATDN2Q93075 761 aa10.56□□□□□ -0.72
LINC01237-204ENST00000439601 PADI6Q6TGC4 694 aa10.55□□□□□ -0.72
LINC01237-204ENST00000439601 NUTM2FA1L443 756 aa10.54□□□□□ -0.72
LINC01237-204ENST00000439601 FCHSD2O94868 740 aa10.54□□□□□ -0.72
LINC01237-204ENST00000439601 NYAP1Q6ZVC0 841 aa10.54□□□□□ -0.72
LINC01237-204ENST00000439601 PNMA3Q9UL41 463 aa10.54□□□□□ -0.72
LINC01237-204ENST00000439601 PTPN5P54829 565 aa10.53□□□□□ -0.72
LINC01237-204ENST00000439601 NUDT18Q6ZVK8 323 aa10.52□□□□□ -0.73
LINC01237-204ENST00000439601 LRCH3Q96II8 777 aa10.51□□□□□ -0.73
LINC01237-204ENST00000439601 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.51□□□□□ -0.73
LINC01237-204ENST00000439601 C3orf80F5H4A9 247 aa10.5□□□□□ -0.73
LINC01237-204ENST00000439601 HIC1Q14526 733 aa10.5□□□□□ -0.73
LINC01237-204ENST00000439601 RBM26Q5T8P6 1007 aaKnown RBP10.5□□□□□ -0.73
LINC01237-204ENST00000439601 WRNQ14191 1432 aaPredicted RBP eCLIP10.5□□□□□ -0.73
LINC01237-204ENST00000439601 SMAPO00193 183 aa10.49□□□□□ -0.73
LINC01237-204ENST00000439601 TULP1O00294 542 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms