RNA–Protein interactions for RNA: ENST00000439513.1

ATAD3A-206, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 5

Gene ATAD3A, Length 403 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-206ENST00000439513 FAM135AQ9P2D6 1515 aa22.63■■□□□ 1.21
ATAD3A-206ENST00000439513 CERKQ8TCT0 537 aa22.63■■□□□ 1.21
ATAD3A-206ENST00000439513 CEP170BQ9Y4F5 1589 aaPredicted RBP22.63■■□□□ 1.21
ATAD3A-206ENST00000439513 APLP2Q06481 763 aa22.62■■□□□ 1.21
ATAD3A-206ENST00000439513 RNF17Q9BXT8 1623 aaKnown RBP22.61■■□□□ 1.21
ATAD3A-206ENST00000439513 PTPN23Q9H3S7 1636 aa22.61■■□□□ 1.21
ATAD3A-206ENST00000439513 PZPP20742 1482 aa22.6■■□□□ 1.21
ATAD3A-206ENST00000439513 ABCC5O15440 1437 aa22.59■■□□□ 1.21
ATAD3A-206ENST00000439513 FBXO31Q5XUX0 539 aaPredicted RBP22.59■■□□□ 1.21
ATAD3A-206ENST00000439513 CROCC2H7BZ55 1655 aa22.58■■□□□ 1.2
ATAD3A-206ENST00000439513 WASHC2CQ9Y4E1 1318 aa22.57■■□□□ 1.2
ATAD3A-206ENST00000439513 FGD6Q6ZV73 1430 aa22.57■■□□□ 1.2
ATAD3A-206ENST00000439513 MROH1Q8NDA8 1641 aa22.57■■□□□ 1.2
ATAD3A-206ENST00000439513 EIF2AK4Q9P2K8 1649 aaKnown RBP22.57■■□□□ 1.2
ATAD3A-206ENST00000439513 NCKAP5LQ9HCH0 1330 aa22.57■■□□□ 1.2
ATAD3A-206ENST00000439513 A2ML1A8K2U0 1454 aa22.56■■□□□ 1.2
ATAD3A-206ENST00000439513 TCOF1Q13428 1488 aaKnown RBP22.56■■□□□ 1.2
ATAD3A-206ENST00000439513 SHANK2Q9UPX8 1470 aa22.56■■□□□ 1.2
ATAD3A-206ENST00000439513 PLA2R1Q13018 1463 aa22.55■■□□□ 1.2
ATAD3A-206ENST00000439513 TNRQ92752 1358 aa22.55■■□□□ 1.2
ATAD3A-206ENST00000439513 ABCC3O15438 1527 aa22.55■■□□□ 1.2
ATAD3A-206ENST00000439513 DNMT1P26358 1616 aaKnown RBP22.54■■□□□ 1.2
ATAD3A-206ENST00000439513 DUOX2Q9NRD8 1548 aa22.54■■□□□ 1.2
ATAD3A-206ENST00000439513 LTBP4Q8N2S1 1624 aa22.53■■□□□ 1.2
ATAD3A-206ENST00000439513 DAPK1P53355 1430 aa22.53■■□□□ 1.2
ATAD3A-206ENST00000439513 KIF15Q9NS87 1388 aa22.51■■□□□ 1.19
ATAD3A-206ENST00000439513 ZC3H13Q5T200 1668 aaKnown RBP22.51■■□□□ 1.19
ATAD3A-206ENST00000439513 PKD2Q13563 968 aa22.48■■□□□ 1.19
ATAD3A-206ENST00000439513 CEP152O94986 1710 aa22.48■■□□□ 1.19
ATAD3A-206ENST00000439513 RRP7BPQ9NSQ0 103 aa22.47■■□□□ 1.19
ATAD3A-206ENST00000439513 ERBINQ96RT1 1412 aa22.46■■□□□ 1.19
ATAD3A-206ENST00000439513 SPATA31D1Q6ZQQ2 1576 aa22.46■■□□□ 1.19
ATAD3A-206ENST00000439513 PRDM15P57071 1507 aaPredicted RBP22.45■■□□□ 1.18
ATAD3A-206ENST00000439513 NLRP1Q9C000 1473 aa22.44■■□□□ 1.18
ATAD3A-206ENST00000439513 ERVK-7P63135 1459 aa22.43■■□□□ 1.18
ATAD3A-206ENST00000439513 ZNF335Q9H4Z2 1342 aaPredicted RBP22.43■■□□□ 1.18
ATAD3A-206ENST00000439513 NEURL4Q96JN8 1562 aa22.42■■□□□ 1.18
ATAD3A-206ENST00000439513 CHIC2Q9UKJ5 165 aa22.42■■□□□ 1.18
ATAD3A-206ENST00000439513 DEPDC5O75140 1603 aa22.42■■□□□ 1.18
ATAD3A-206ENST00000439513 POLR1AO95602 1720 aaPredicted RBP22.41■■□□□ 1.18
ATAD3A-206ENST00000439513 UGGT1Q9NYU2 1555 aa22.4■■□□□ 1.18
ATAD3A-206ENST00000439513 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.39■■□□□ 1.18
ATAD3A-206ENST00000439513 ANKRD30AQ9BXX3 1397 aa22.38■■□□□ 1.17
ATAD3A-206ENST00000439513 ADGRL2O95490 1459 aa22.38■■□□□ 1.17
ATAD3A-206ENST00000439513 CFAP65Q6ZU64 1925 aaKnown RBP22.37■■□□□ 1.17
ATAD3A-206ENST00000439513 IQSEC2Q5JU85 1478 aa22.37■■□□□ 1.17
ATAD3A-206ENST00000439513 ARHGAP31Q2M1Z3 1444 aa22.36■■□□□ 1.17
ATAD3A-206ENST00000439513 FAM50AQ14320 339 aaKnown RBP22.35■■□□□ 1.17
ATAD3A-206ENST00000439513 THEMISQ8N1K5 641 aaPredicted RBP22.35■■□□□ 1.17
ATAD3A-206ENST00000439513 VWDEQ8N2E2 1590 aa22.34■■□□□ 1.17
ATAD3A-206ENST00000439513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.34■■□□□ 1.17
ATAD3A-206ENST00000439513 MED14O60244 1454 aa22.31■■□□□ 1.16
ATAD3A-206ENST00000439513 ANKLE2Q86XL3 938 aa22.31■■□□□ 1.16
ATAD3A-206ENST00000439513 UBR1Q8IWV7 1749 aa22.31■■□□□ 1.16
ATAD3A-206ENST00000439513 LMTK2Q8IWU2 1503 aa22.31■■□□□ 1.16
ATAD3A-206ENST00000439513 NPHP4O75161 1426 aaPredicted RBP22.29■■□□□ 1.16
ATAD3A-206ENST00000439513 KANK1Q14678 1352 aa22.28■■□□□ 1.16
ATAD3A-206ENST00000439513 ANKRD50Q9ULJ7 1429 aa22.25■■□□□ 1.15
ATAD3A-206ENST00000439513 IQGAP1P46940 1657 aa22.25■■□□□ 1.15
ATAD3A-206ENST00000439513 EFCAB6Q5THR3 1501 aa22.24■■□□□ 1.15
ATAD3A-206ENST00000439513 PPARGC1BQ86YN6 1023 aaKnown RBP22.23■■□□□ 1.15
ATAD3A-206ENST00000439513 PIK3C2BO00750 1634 aa22.23■■□□□ 1.15
ATAD3A-206ENST00000439513 ARHGAP23Q9P227 1491 aa22.22■■□□□ 1.15
ATAD3A-206ENST00000439513 SYNMO15061 1565 aa22.22■■□□□ 1.15
ATAD3A-206ENST00000439513 SLIT1O75093 1534 aa22.21■■□□□ 1.15
ATAD3A-206ENST00000439513 CPS1P31327 1500 aa22.21■■□□□ 1.15
ATAD3A-206ENST00000439513 NOS1P29475 1434 aa22.2■■□□□ 1.14
ATAD3A-206ENST00000439513 UBAP1LF5GYI3 381 aa22.19■■□□□ 1.14
ATAD3A-206ENST00000439513 LTKP29376 864 aa22.19■■□□□ 1.14
ATAD3A-206ENST00000439513 SCAF11Q99590 1463 aaKnown RBP22.19■■□□□ 1.14
ATAD3A-206ENST00000439513 STRCP1A6NGW2 1772 aa22.18■■□□□ 1.14
ATAD3A-206ENST00000439513 ROCK1Q13464 1354 aa22.17■■□□□ 1.14
ATAD3A-206ENST00000439513 IDI1Q13907 227 aa22.17■■□□□ 1.14
ATAD3A-206ENST00000439513 UNC13BO14795 1591 aa22.16■■□□□ 1.14
ATAD3A-206ENST00000439513 KDM5AP29375 1690 aaKnown RBP22.15■■□□□ 1.14
ATAD3A-206ENST00000439513 TMEM2Q9UHN6 1383 aa22.14■■□□□ 1.14
ATAD3A-206ENST00000439513 TET3O43151 1660 aa22.14■■□□□ 1.14
ATAD3A-206ENST00000439513 TXNDC2Q86VQ3 553 aa22.14■■□□□ 1.13
ATAD3A-206ENST00000439513 RPRD2Q5VT52 1461 aaKnown RBP22.13■■□□□ 1.13
ATAD3A-206ENST00000439513 ADGRB3O60242 1522 aa22.11■■□□□ 1.13
ATAD3A-206ENST00000439513 ITGAEP38570 1179 aa22.1■■□□□ 1.13
ATAD3A-206ENST00000439513 GCC2Q8IWJ2 1684 aa22.1■■□□□ 1.13
ATAD3A-206ENST00000439513 ALKQ9UM73 1620 aa22.09■■□□□ 1.13
ATAD3A-206ENST00000439513 STAG3Q9UJ98 1225 aa22.09■■□□□ 1.13
ATAD3A-206ENST00000439513 LRRC7Q96NW7 1537 aa22.09■■□□□ 1.13
ATAD3A-206ENST00000439513 EID1Q9Y6B2 187 aa22.07■■□□□ 1.12
ATAD3A-206ENST00000439513 IQGAP3Q86VI3 1631 aa22.06■■□□□ 1.12
ATAD3A-206ENST00000439513 SLC52A1Q9NWF4 448 aa22.06■■□□□ 1.12
ATAD3A-206ENST00000439513 E9PCH4 1651 aa22.06■■□□□ 1.12
ATAD3A-206ENST00000439513 RRBP1Q9P2E9 1410 aaKnown RBP22.05■■□□□ 1.12
ATAD3A-206ENST00000439513 MYO5BQ9ULV0 1848 aa22.03■■□□□ 1.12
ATAD3A-206ENST00000439513 TOM1O60784 492 aa22.02■■□□□ 1.12
ATAD3A-206ENST00000439513 PIP4K2BP78356 416 aa22.02■■□□□ 1.12
ATAD3A-206ENST00000439513 TMEM131LA2VDJ0 1609 aa22.02■■□□□ 1.11
ATAD3A-206ENST00000439513 NUP155O75694 1391 aa22■■□□□ 1.11
ATAD3A-206ENST00000439513 DISP3Q9P2K9 1392 aa22■■□□□ 1.11
ATAD3A-206ENST00000439513 ZFYVE9O95405 1425 aa22■■□□□ 1.11
ATAD3A-206ENST00000439513 SCAF1Q9H7N4 1312 aaKnown RBP21.99■■□□□ 1.11
ATAD3A-206ENST00000439513 XIRP1Q702N8 1843 aaKnown RBP21.99■■□□□ 1.11
ATAD3A-206ENST00000439513 HSPA1LP34931 641 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms