RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 MIA2Q96PC5 1412 aa21.2■□□□□ 0.98
GARNL3-206ENST00000439286 PLA2R1Q13018 1463 aa21.2■□□□□ 0.98
GARNL3-206ENST00000439286 ARHGEF5Q12774 1597 aa21.19■□□□□ 0.98
GARNL3-206ENST00000439286 MYOM3Q5VTT5 1437 aa21.18■□□□□ 0.98
GARNL3-206ENST00000439286 THEMISQ8N1K5 641 aaPredicted RBP21.17■□□□□ 0.98
GARNL3-206ENST00000439286 A2ML1A8K2U0 1454 aa21.17■□□□□ 0.98
GARNL3-206ENST00000439286 KDM5DQ9BY66 1539 aa21.17■□□□□ 0.98
GARNL3-206ENST00000439286 CEP170BQ9Y4F5 1589 aaPredicted RBP21.17■□□□□ 0.98
GARNL3-206ENST00000439286 ZNF335Q9H4Z2 1342 aaPredicted RBP21.16■□□□□ 0.98
GARNL3-206ENST00000439286 FAM135AQ9P2D6 1515 aa21.15■□□□□ 0.98
GARNL3-206ENST00000439286 MYO3AQ8NEV4 1616 aa21.15■□□□□ 0.98
GARNL3-206ENST00000439286 PZPP20742 1482 aa21.14■□□□□ 0.98
GARNL3-206ENST00000439286 ANKLE2Q86XL3 938 aa21.14■□□□□ 0.97
GARNL3-206ENST00000439286 TCOF1Q13428 1488 aaKnown RBP21.13■□□□□ 0.97
GARNL3-206ENST00000439286 IQSEC2Q5JU85 1478 aa21.12■□□□□ 0.97
GARNL3-206ENST00000439286 LTBP4Q8N2S1 1624 aa21.11■□□□□ 0.97
GARNL3-206ENST00000439286 UBAP1LF5GYI3 381 aa21.1■□□□□ 0.97
GARNL3-206ENST00000439286 RRP7BPQ9NSQ0 103 aa21.09■□□□□ 0.97
GARNL3-206ENST00000439286 ZNF142P52746 1687 aaPredicted RBP21.08■□□□□ 0.96
GARNL3-206ENST00000439286 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.07■□□□□ 0.96
GARNL3-206ENST00000439286 NLRP1Q9C000 1473 aa21.07■□□□□ 0.96
GARNL3-206ENST00000439286 MAST1Q9Y2H9 1570 aa21.06■□□□□ 0.96
GARNL3-206ENST00000439286 DNMT1P26358 1616 aaKnown RBP21.05■□□□□ 0.96
GARNL3-206ENST00000439286 KIF15Q9NS87 1388 aa21.05■□□□□ 0.96
GARNL3-206ENST00000439286 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.04■□□□□ 0.96
GARNL3-206ENST00000439286 DISP3Q9P2K9 1392 aa21.04■□□□□ 0.96
GARNL3-206ENST00000439286 DUOX2Q9NRD8 1548 aa21.03■□□□□ 0.96
GARNL3-206ENST00000439286 ABCC5O15440 1437 aa21.03■□□□□ 0.96
GARNL3-206ENST00000439286 UGGT1Q9NYU2 1555 aa21.01■□□□□ 0.95
GARNL3-206ENST00000439286 KANK1Q14678 1352 aa21■□□□□ 0.95
GARNL3-206ENST00000439286 ABCC3O15438 1527 aa21■□□□□ 0.95
GARNL3-206ENST00000439286 CHIC2Q9UKJ5 165 aa21■□□□□ 0.95
GARNL3-206ENST00000439286 ANKRD30AQ9BXX3 1397 aa20.98■□□□□ 0.95
GARNL3-206ENST00000439286 FGD6Q6ZV73 1430 aa20.98■□□□□ 0.95
GARNL3-206ENST00000439286 TOM1O60784 492 aa20.98■□□□□ 0.95
GARNL3-206ENST00000439286 SCAF1Q9H7N4 1312 aaKnown RBP20.98■□□□□ 0.95
GARNL3-206ENST00000439286 NPHP4O75161 1426 aaPredicted RBP20.97■□□□□ 0.95
GARNL3-206ENST00000439286 DAPK1P53355 1430 aa20.97■□□□□ 0.95
GARNL3-206ENST00000439286 ERBINQ96RT1 1412 aa20.97■□□□□ 0.95
GARNL3-206ENST00000439286 SHANK2Q9UPX8 1470 aa20.97■□□□□ 0.95
GARNL3-206ENST00000439286 RNF17Q9BXT8 1623 aaKnown RBP20.96■□□□□ 0.95
GARNL3-206ENST00000439286 EIF2AK4Q9P2K8 1649 aaKnown RBP20.96■□□□□ 0.95
GARNL3-206ENST00000439286 FAM50AQ14320 339 aaKnown RBP20.96■□□□□ 0.95
GARNL3-206ENST00000439286 STAG3Q9UJ98 1225 aa20.96■□□□□ 0.95
GARNL3-206ENST00000439286 ERVK-7P63135 1459 aa20.95■□□□□ 0.94
GARNL3-206ENST00000439286 PTPN23Q9H3S7 1636 aa20.95■□□□□ 0.94
GARNL3-206ENST00000439286 PIP4K2BP78356 416 aa20.94■□□□□ 0.94
GARNL3-206ENST00000439286 SPATA31D1Q6ZQQ2 1576 aa20.93■□□□□ 0.94
GARNL3-206ENST00000439286 EID1Q9Y6B2 187 aa20.93■□□□□ 0.94
GARNL3-206ENST00000439286 CPS1P31327 1500 aa20.93■□□□□ 0.94
GARNL3-206ENST00000439286 ZC3H13Q5T200 1668 aaKnown RBP20.93■□□□□ 0.94
GARNL3-206ENST00000439286 TXNDC2Q86VQ3 553 aa20.92■□□□□ 0.94
GARNL3-206ENST00000439286 MED14O60244 1454 aa20.91■□□□□ 0.94
GARNL3-206ENST00000439286 ARHGAP31Q2M1Z3 1444 aa20.91■□□□□ 0.94
GARNL3-206ENST00000439286 NEURL4Q96JN8 1562 aa20.89■□□□□ 0.93
GARNL3-206ENST00000439286 MROH1Q8NDA8 1641 aa20.87■□□□□ 0.93
GARNL3-206ENST00000439286 PRDM15P57071 1507 aaPredicted RBP20.85■□□□□ 0.93
GARNL3-206ENST00000439286 DEPDC5O75140 1603 aa20.85■□□□□ 0.93
GARNL3-206ENST00000439286 LTKP29376 864 aa20.84■□□□□ 0.93
GARNL3-206ENST00000439286 POLR1AO95602 1720 aaPredicted RBP20.84■□□□□ 0.93
GARNL3-206ENST00000439286 SCAF11Q99590 1463 aaKnown RBP20.83■□□□□ 0.93
GARNL3-206ENST00000439286 HSPA1LP34931 641 aa20.83■□□□□ 0.93
GARNL3-206ENST00000439286 ILDR2Q71H61 639 aa20.83■□□□□ 0.93
GARNL3-206ENST00000439286 IDI1Q13907 227 aa20.82■□□□□ 0.92
GARNL3-206ENST00000439286 VWDEQ8N2E2 1590 aa20.8■□□□□ 0.92
GARNL3-206ENST00000439286 SLC52A1Q9NWF4 448 aa20.8■□□□□ 0.92
GARNL3-206ENST00000439286 CEP152O94986 1710 aa20.79■□□□□ 0.92
GARNL3-206ENST00000439286 TMEM2Q9UHN6 1383 aa20.79■□□□□ 0.92
GARNL3-206ENST00000439286 CROCC2H7BZ55 1655 aa20.79■□□□□ 0.92
GARNL3-206ENST00000439286 ANKRD50Q9ULJ7 1429 aa20.78■□□□□ 0.92
GARNL3-206ENST00000439286 SOCS7O14512 581 aa20.78■□□□□ 0.92
GARNL3-206ENST00000439286 BCANQ96GW7 911 aa20.78■□□□□ 0.92
GARNL3-206ENST00000439286 IQGAP1P46940 1657 aa20.77■□□□□ 0.92
GARNL3-206ENST00000439286 ADGRL2O95490 1459 aa20.77■□□□□ 0.92
GARNL3-206ENST00000439286 LMTK2Q8IWU2 1503 aa20.77■□□□□ 0.92
GARNL3-206ENST00000439286 ARHGAP23Q9P227 1491 aa20.76■□□□□ 0.91
GARNL3-206ENST00000439286 SLIT1O75093 1534 aa20.76■□□□□ 0.91
GARNL3-206ENST00000439286 HDGFP51858 240 aaKnown RBP20.75■□□□□ 0.91
GARNL3-206ENST00000439286 LRRC7Q96NW7 1537 aa20.73■□□□□ 0.91
GARNL3-206ENST00000439286 UBR1Q8IWV7 1749 aa20.73■□□□□ 0.91
GARNL3-206ENST00000439286 SENP3Q9H4L4 574 aaPredicted RBP20.72■□□□□ 0.91
GARNL3-206ENST00000439286 ITGAEP38570 1179 aa20.71■□□□□ 0.91
GARNL3-206ENST00000439286 EFCAB6Q5THR3 1501 aa20.71■□□□□ 0.91
GARNL3-206ENST00000439286 NOS1P29475 1434 aa20.7■□□□□ 0.9
GARNL3-206ENST00000439286 PPP1R15AO75807 674 aaPredicted RBP20.7■□□□□ 0.9
GARNL3-206ENST00000439286 SLC26A8Q96RN1 970 aa20.7■□□□□ 0.9
GARNL3-206ENST00000439286 KCNA6P17658 529 aa20.69■□□□□ 0.9
GARNL3-206ENST00000439286 CHGAP10645 457 aaKnown RBP20.68■□□□□ 0.9
GARNL3-206ENST00000439286 PROSER2Q86WR7 435 aaPredicted RBP20.67■□□□□ 0.9
GARNL3-206ENST00000439286 RPRD2Q5VT52 1461 aaKnown RBP20.67■□□□□ 0.9
GARNL3-206ENST00000439286 PIK3C2BO00750 1634 aa20.67■□□□□ 0.9
GARNL3-206ENST00000439286 PPARGC1BQ86YN6 1023 aaKnown RBP20.66■□□□□ 0.9
GARNL3-206ENST00000439286 PHF23Q9BUL5 403 aaPredicted RBP20.66■□□□□ 0.9
GARNL3-206ENST00000439286 ROCK1Q13464 1354 aa20.66■□□□□ 0.9
GARNL3-206ENST00000439286 CFAP65Q6ZU64 1925 aaKnown RBP20.65■□□□□ 0.9
GARNL3-206ENST00000439286 SYNMO15061 1565 aa20.64■□□□□ 0.9
GARNL3-206ENST00000439286 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.64■□□□□ 0.89
GARNL3-206ENST00000439286 TMEM94Q12767 1356 aa20.62■□□□□ 0.89
GARNL3-206ENST00000439286 NUP155O75694 1391 aa20.61■□□□□ 0.89
GARNL3-206ENST00000439286 ADGRB3O60242 1522 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms