RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 ZFYVE16Q7Z3T8 1539 aa18.16■□□□□ 0.5
HLA-DOB-206ENST00000438763 DUOX2Q9NRD8 1548 aa18.16■□□□□ 0.5
HLA-DOB-206ENST00000438763 KDM5CP41229 1560 aa18.14■□□□□ 0.49
HLA-DOB-206ENST00000438763 INO80Q9ULG1 1556 aaPredicted RBP18.14■□□□□ 0.49
HLA-DOB-206ENST00000438763 ATP7AQ04656 1500 aa18.14■□□□□ 0.49
HLA-DOB-206ENST00000438763 MLH3Q9UHC1 1453 aa18.14■□□□□ 0.49
HLA-DOB-206ENST00000438763 RICTORQ6R327 1708 aa18.14■□□□□ 0.49
HLA-DOB-206ENST00000438763 MPHOSPH9Q99550 1183 aa18.13■□□□□ 0.49
HLA-DOB-206ENST00000438763 MYT1LQ9UL68 1186 aa18.13■□□□□ 0.49
HLA-DOB-206ENST00000438763 ERBINQ96RT1 1412 aa18.12■□□□□ 0.49
HLA-DOB-206ENST00000438763 YEATS2Q9ULM3 1422 aa18.1■□□□□ 0.49
HLA-DOB-206ENST00000438763 FER1L4A9Z1Z3 1794 aa18.1■□□□□ 0.49
HLA-DOB-206ENST00000438763 KIDINS220Q9ULH0 1771 aa18.09■□□□□ 0.49
HLA-DOB-206ENST00000438763 DHX29Q7Z478 1369 aaKnown RBP18.08■□□□□ 0.49
HLA-DOB-206ENST00000438763 SLC4A1APQ9BWU0 796 aaKnown RBP18.07■□□□□ 0.48
HLA-DOB-206ENST00000438763 NUP155O75694 1391 aa18.07■□□□□ 0.48
HLA-DOB-206ENST00000438763 STRCQ7RTU9 1775 aa18.06■□□□□ 0.48
HLA-DOB-206ENST00000438763 CEBPAP49715 358 aaPredicted RBP18.06■□□□□ 0.48
HLA-DOB-206ENST00000438763 PZPP20742 1482 aa18.06■□□□□ 0.48
HLA-DOB-206ENST00000438763 KDM5DQ9BY66 1539 aa18.06■□□□□ 0.48
HLA-DOB-206ENST00000438763 PREX1Q8TCU6 1659 aa18.04■□□□□ 0.48
HLA-DOB-206ENST00000438763 SENP3Q9H4L4 574 aaPredicted RBP18.04■□□□□ 0.48
HLA-DOB-206ENST00000438763 A2MP01023 1474 aa18.03■□□□□ 0.48
HLA-DOB-206ENST00000438763 MAGI2Q86UL8 1455 aa18.03■□□□□ 0.48
HLA-DOB-206ENST00000438763 ZMYM4Q5VZL5 1548 aa18.02■□□□□ 0.48
HLA-DOB-206ENST00000438763 UNC13BO14795 1591 aa18.02■□□□□ 0.48
HLA-DOB-206ENST00000438763 DMRT2Q9Y5R5 561 aa18.01■□□□□ 0.47
HLA-DOB-206ENST00000438763 EIF2AK4Q9P2K8 1649 aaKnown RBP18■□□□□ 0.47
HLA-DOB-206ENST00000438763 SIN3AQ96ST3 1273 aa18■□□□□ 0.47
HLA-DOB-206ENST00000438763 KIF3BO15066 747 aa17.99■□□□□ 0.47
HLA-DOB-206ENST00000438763 PKD2Q13563 968 aa17.99■□□□□ 0.47
HLA-DOB-206ENST00000438763 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.99■□□□□ 0.47
HLA-DOB-206ENST00000438763 TIMELESSQ9UNS1 1208 aa17.99■□□□□ 0.47
HLA-DOB-206ENST00000438763 ABCA6Q8N139 1617 aa17.98■□□□□ 0.47
HLA-DOB-206ENST00000438763 ANKRD30BQ9BXX2 1392 aa17.97■□□□□ 0.47
HLA-DOB-206ENST00000438763 DIP2CQ9Y2E4 1556 aa17.97■□□□□ 0.47
HLA-DOB-206ENST00000438763 FAM135AQ9P2D6 1515 aa17.96■□□□□ 0.47
HLA-DOB-206ENST00000438763 FOXD1Q16676 465 aa17.96■□□□□ 0.47
HLA-DOB-206ENST00000438763 NEUROD1Q13562 356 aa17.95■□□□□ 0.46
HLA-DOB-206ENST00000438763 DEPDC5O75140 1603 aa17.95■□□□□ 0.46
HLA-DOB-206ENST00000438763 IQGAP3Q86VI3 1631 aa17.95■□□□□ 0.46
HLA-DOB-206ENST00000438763 UHRF1BP1Q6BDS2 1440 aa17.95■□□□□ 0.46
HLA-DOB-206ENST00000438763 KANK1Q14678 1352 aa17.94■□□□□ 0.46
HLA-DOB-206ENST00000438763 ATP10AO60312 1499 aa17.93■□□□□ 0.46
HLA-DOB-206ENST00000438763 LTBP4Q8N2S1 1624 aa17.93■□□□□ 0.46
HLA-DOB-206ENST00000438763 PTPRTO14522 1441 aa17.91■□□□□ 0.46
HLA-DOB-206ENST00000438763 VWDEQ8N2E2 1590 aa17.9■□□□□ 0.46
HLA-DOB-206ENST00000438763 PRDM15P57071 1507 aaPredicted RBP17.9■□□□□ 0.46
HLA-DOB-206ENST00000438763 REREQ9P2R6 1566 aa17.9■□□□□ 0.46
HLA-DOB-206ENST00000438763 MROH1Q8NDA8 1641 aa17.89■□□□□ 0.45
HLA-DOB-206ENST00000438763 RNF17Q9BXT8 1623 aaKnown RBP17.89■□□□□ 0.45
HLA-DOB-206ENST00000438763 SETD1BQ9UPS6 1966 aaKnown RBP17.87■□□□□ 0.45
HLA-DOB-206ENST00000438763 GGT6Q6P531 493 aa17.87■□□□□ 0.45
HLA-DOB-206ENST00000438763 TONSLQ96HA7 1378 aa17.86■□□□□ 0.45
HLA-DOB-206ENST00000438763 RPRD2Q5VT52 1461 aaKnown RBP17.86■□□□□ 0.45
HLA-DOB-206ENST00000438763 AGLP35573 1532 aa17.85■□□□□ 0.45
HLA-DOB-206ENST00000438763 LMTK2Q8IWU2 1503 aa17.85■□□□□ 0.45
HLA-DOB-206ENST00000438763 IQSEC2Q5JU85 1478 aa17.84■□□□□ 0.45
HLA-DOB-206ENST00000438763 TET3O43151 1660 aa17.83■□□□□ 0.44
HLA-DOB-206ENST00000438763 UBAP1LF5GYI3 381 aa17.82■□□□□ 0.44
HLA-DOB-206ENST00000438763 PPP1R15AO75807 674 aaPredicted RBP17.82■□□□□ 0.44
HLA-DOB-206ENST00000438763 PPP6R1Q9UPN7 881 aa17.82■□□□□ 0.44
HLA-DOB-206ENST00000438763 WASHC2CQ9Y4E1 1318 aa17.81■□□□□ 0.44
HLA-DOB-206ENST00000438763 C3P01024 1663 aa17.81■□□□□ 0.44
HLA-DOB-206ENST00000438763 PLA2R1Q13018 1463 aa17.8■□□□□ 0.44
HLA-DOB-206ENST00000438763 E9PCH4 1651 aa17.79■□□□□ 0.44
HLA-DOB-206ENST00000438763 ABCC3O15438 1527 aa17.78■□□□□ 0.44
HLA-DOB-206ENST00000438763 ZNF335Q9H4Z2 1342 aaPredicted RBP17.77■□□□□ 0.44
HLA-DOB-206ENST00000438763 CCDC144AA2RUR9 1427 aa17.77■□□□□ 0.44
HLA-DOB-206ENST00000438763 EFCAB6Q5THR3 1501 aa17.77■□□□□ 0.44
HLA-DOB-206ENST00000438763 L3MBTL2Q969R5 705 aa17.77■□□□□ 0.43
HLA-DOB-206ENST00000438763 CEP152O94986 1710 aa17.75■□□□□ 0.43
HLA-DOB-206ENST00000438763 NCKAP5LQ9HCH0 1330 aa17.74■□□□□ 0.43
HLA-DOB-206ENST00000438763 ARHGAP31Q2M1Z3 1444 aa17.74■□□□□ 0.43
HLA-DOB-206ENST00000438763 ZC3H13Q5T200 1668 aaKnown RBP17.74■□□□□ 0.43
HLA-DOB-206ENST00000438763 TRPM2O94759 1503 aa17.73■□□□□ 0.43
HLA-DOB-206ENST00000438763 CAMSAP1Q5T5Y3 1602 aa17.72■□□□□ 0.43
HLA-DOB-206ENST00000438763 NPATQ14207 1427 aa17.72■□□□□ 0.43
HLA-DOB-206ENST00000438763 ESF1Q9H501 851 aaKnown RBP17.72■□□□□ 0.43
HLA-DOB-206ENST00000438763 MED1Q15648 1581 aaPredicted RBP17.72■□□□□ 0.43
HLA-DOB-206ENST00000438763 SPHKAPQ2M3C7 1700 aa17.7■□□□□ 0.42
HLA-DOB-206ENST00000438763 HSPA1LP34931 641 aa17.68■□□□□ 0.42
HLA-DOB-206ENST00000438763 SCAF1Q9H7N4 1312 aaKnown RBP17.68■□□□□ 0.42
HLA-DOB-206ENST00000438763 NOS1P29475 1434 aa17.67■□□□□ 0.42
HLA-DOB-206ENST00000438763 CNTLNQ9NXG0 1405 aa17.67■□□□□ 0.42
HLA-DOB-206ENST00000438763 PIP4K2BP78356 416 aa17.65■□□□□ 0.42
HLA-DOB-206ENST00000438763 SPATA31E1Q6ZUB1 1445 aa17.64■□□□□ 0.41
HLA-DOB-206ENST00000438763 RGL3Q3MIN7 710 aa17.64■□□□□ 0.41
HLA-DOB-206ENST00000438763 CLTCL1P53675 1640 aa17.64■□□□□ 0.41
HLA-DOB-206ENST00000438763 ZNF316A6NFI3 1004 aaPredicted RBP17.63■□□□□ 0.41
HLA-DOB-206ENST00000438763 NEURL4Q96JN8 1562 aa17.63■□□□□ 0.41
HLA-DOB-206ENST00000438763 NBPF8Q3BBV2 869 aa17.62■□□□□ 0.41
HLA-DOB-206ENST00000438763 DCAF11Q8TEB1 546 aa17.62■□□□□ 0.41
HLA-DOB-206ENST00000438763 STAC3Q96MF2 364 aa17.62■□□□□ 0.41
HLA-DOB-206ENST00000438763 CLTCQ00610 1675 aaKnown RBP17.61■□□□□ 0.41
HLA-DOB-206ENST00000438763 SLC52A1Q9NWF4 448 aa17.61■□□□□ 0.41
HLA-DOB-206ENST00000438763 ZMYM3Q14202 1370 aa17.6■□□□□ 0.41
HLA-DOB-206ENST00000438763 PHF23Q9BUL5 403 aaPredicted RBP17.59■□□□□ 0.41
HLA-DOB-206ENST00000438763 KDM2AQ9Y2K7 1162 aa17.59■□□□□ 0.41
HLA-DOB-206ENST00000438763 FBXO31Q5XUX0 539 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms