RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 KIF3BO15066 747 aa28.91■■■□□ 2.22
GTF3A-204ENST00000438571 RNF17Q9BXT8 1623 aaKnown RBP28.9■■■□□ 2.22
GTF3A-204ENST00000438571 TCOF1Q13428 1488 aaKnown RBP28.9■■■□□ 2.22
GTF3A-204ENST00000438571 PPP6R1Q9UPN7 881 aa28.88■■■□□ 2.21
GTF3A-204ENST00000438571 FAM135AQ9P2D6 1515 aa28.88■■■□□ 2.21
GTF3A-204ENST00000438571 A2ML1A8K2U0 1454 aa28.87■■■□□ 2.21
GTF3A-204ENST00000438571 CEP152O94986 1710 aa28.86■■■□□ 2.21
GTF3A-204ENST00000438571 PZPP20742 1482 aa28.86■■■□□ 2.21
GTF3A-204ENST00000438571 CROCC2H7BZ55 1655 aa28.86■■■□□ 2.21
GTF3A-204ENST00000438571 CFAP65Q6ZU64 1925 aaKnown RBP28.85■■■□□ 2.21
GTF3A-204ENST00000438571 RSPH4AQ5TD94 716 aa28.84■■■□□ 2.21
GTF3A-204ENST00000438571 FBXO31Q5XUX0 539 aaPredicted RBP28.84■■■□□ 2.21
GTF3A-204ENST00000438571 MYOM3Q5VTT5 1437 aa28.84■■■□□ 2.21
GTF3A-204ENST00000438571 MROH1Q8NDA8 1641 aa28.83■■■□□ 2.21
GTF3A-204ENST00000438571 EIF2AK4Q9P2K8 1649 aaKnown RBP28.83■■■□□ 2.21
GTF3A-204ENST00000438571 ZC3H13Q5T200 1668 aaKnown RBP28.83■■■□□ 2.21
GTF3A-204ENST00000438571 NEURL4Q96JN8 1562 aa28.82■■■□□ 2.2
GTF3A-204ENST00000438571 ZNF335Q9H4Z2 1342 aaPredicted RBP28.81■■■□□ 2.2
GTF3A-204ENST00000438571 TNRQ92752 1358 aa28.8■■■□□ 2.2
GTF3A-204ENST00000438571 IQSEC2Q5JU85 1478 aa28.79■■■□□ 2.2
GTF3A-204ENST00000438571 TSPY4P0CV99 314 aa28.79■■■□□ 2.2
GTF3A-204ENST00000438571 TSPY10P0CW01 314 aa28.79■■■□□ 2.2
GTF3A-204ENST00000438571 MIA2Q96PC5 1412 aa28.78■■■□□ 2.2
GTF3A-204ENST00000438571 ABCC3O15438 1527 aa28.78■■■□□ 2.2
GTF3A-204ENST00000438571 PTPN23Q9H3S7 1636 aa28.76■■■□□ 2.2
GTF3A-204ENST00000438571 WASHC2CQ9Y4E1 1318 aa28.76■■■□□ 2.19
GTF3A-204ENST00000438571 PKD2Q13563 968 aa28.76■■■□□ 2.19
GTF3A-204ENST00000438571 SPATA31D1Q6ZQQ2 1576 aa28.71■■■□□ 2.19
GTF3A-204ENST00000438571 UGGT1Q9NYU2 1555 aa28.69■■■□□ 2.18
GTF3A-204ENST00000438571 DUOX2Q9NRD8 1548 aa28.69■■■□□ 2.18
GTF3A-204ENST00000438571 NLRP1Q9C000 1473 aa28.66■■■□□ 2.18
GTF3A-204ENST00000438571 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.65■■■□□ 2.18
GTF3A-204ENST00000438571 ABCC5O15440 1437 aa28.65■■■□□ 2.18
GTF3A-204ENST00000438571 ERVK-7P63135 1459 aa28.65■■■□□ 2.18
GTF3A-204ENST00000438571 SHANK2Q9UPX8 1470 aa28.65■■■□□ 2.18
GTF3A-204ENST00000438571 DEPDC5O75140 1603 aa28.64■■■□□ 2.18
GTF3A-204ENST00000438571 PRDM15P57071 1507 aaPredicted RBP28.64■■■□□ 2.17
GTF3A-204ENST00000438571 UBR1Q8IWV7 1749 aa28.63■■■□□ 2.17
GTF3A-204ENST00000438571 IQGAP1P46940 1657 aa28.62■■■□□ 2.17
GTF3A-204ENST00000438571 DAPK1P53355 1430 aa28.6■■■□□ 2.17
GTF3A-204ENST00000438571 STRCP1A6NGW2 1772 aa28.6■■■□□ 2.17
GTF3A-204ENST00000438571 VWDEQ8N2E2 1590 aa28.6■■■□□ 2.17
GTF3A-204ENST00000438571 KIF15Q9NS87 1388 aa28.6■■■□□ 2.17
GTF3A-204ENST00000438571 FGD6Q6ZV73 1430 aa28.6■■■□□ 2.17
GTF3A-204ENST00000438571 ERBINQ96RT1 1412 aa28.55■■■□□ 2.16
GTF3A-204ENST00000438571 MED14O60244 1454 aa28.54■■■□□ 2.16
GTF3A-204ENST00000438571 DISP3Q9P2K9 1392 aa28.54■■■□□ 2.16
GTF3A-204ENST00000438571 CPS1P31327 1500 aa28.53■■■□□ 2.16
GTF3A-204ENST00000438571 NPHP4O75161 1426 aaPredicted RBP28.53■■■□□ 2.16
GTF3A-204ENST00000438571 UBAP1LF5GYI3 381 aa28.53■■■□□ 2.16
GTF3A-204ENST00000438571 APLP2Q06481 763 aa28.53■■■□□ 2.16
GTF3A-204ENST00000438571 RRP7BPQ9NSQ0 103 aa28.52■■■□□ 2.16
GTF3A-204ENST00000438571 THEMISQ8N1K5 641 aaPredicted RBP28.51■■■□□ 2.15
GTF3A-204ENST00000438571 ANKLE2Q86XL3 938 aa28.5■■■□□ 2.15
GTF3A-204ENST00000438571 PIK3C2BO00750 1634 aa28.5■■■□□ 2.15
GTF3A-204ENST00000438571 ILDR2Q71H61 639 aa28.46■■■□□ 2.15
GTF3A-204ENST00000438571 ARHGAP31Q2M1Z3 1444 aa28.45■■■□□ 2.15
GTF3A-204ENST00000438571 ALKQ9UM73 1620 aa28.45■■■□□ 2.14
GTF3A-204ENST00000438571 CHIC2Q9UKJ5 165 aa28.45■■■□□ 2.14
GTF3A-204ENST00000438571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.42■■■□□ 2.148e-8■■□□□ 14.3
GTF3A-204ENST00000438571 SLIT1O75093 1534 aa28.4■■■□□ 2.14
GTF3A-204ENST00000438571 XIRP1Q702N8 1843 aaKnown RBP28.4■■■□□ 2.14
GTF3A-204ENST00000438571 SYNMO15061 1565 aa28.4■■■□□ 2.14
GTF3A-204ENST00000438571 ARHGAP23Q9P227 1491 aa28.4■■■□□ 2.14
GTF3A-204ENST00000438571 ANKRD30AQ9BXX3 1397 aa28.39■■■□□ 2.14
GTF3A-204ENST00000438571 LMTK2Q8IWU2 1503 aa28.39■■■□□ 2.14
GTF3A-204ENST00000438571 ADGRL2O95490 1459 aa28.39■■■□□ 2.13
GTF3A-204ENST00000438571 SCAF11Q99590 1463 aaKnown RBP28.39■■■□□ 2.13
GTF3A-204ENST00000438571 EFCAB6Q5THR3 1501 aa28.37■■■□□ 2.13
GTF3A-204ENST00000438571 MYO5BQ9ULV0 1848 aa28.36■■■□□ 2.13
GTF3A-204ENST00000438571 KDM5AP29375 1690 aaKnown RBP28.35■■■□□ 2.13
GTF3A-204ENST00000438571 LRRC7Q96NW7 1537 aa28.34■■■□□ 2.13
GTF3A-204ENST00000438571 SCAF1Q9H7N4 1312 aaKnown RBP28.34■■■□□ 2.13
GTF3A-204ENST00000438571 PIP4K2BP78356 416 aa28.33■■■□□ 2.13
GTF3A-204ENST00000438571 KANK1Q14678 1352 aa28.33■■■□□ 2.13
GTF3A-204ENST00000438571 LTKP29376 864 aa28.32■■■□□ 2.12
GTF3A-204ENST00000438571 FAM50AQ14320 339 aaKnown RBP28.29■■■□□ 2.12
GTF3A-204ENST00000438571 HSPA1LP34931 641 aa28.28■■■□□ 2.12
GTF3A-204ENST00000438571 TET3O43151 1660 aa28.26■■■□□ 2.12
GTF3A-204ENST00000438571 GCC2Q8IWJ2 1684 aa28.26■■■□□ 2.12
GTF3A-204ENST00000438571 TOM1O60784 492 aa28.26■■■□□ 2.11
GTF3A-204ENST00000438571 ADGRB3O60242 1522 aa28.26■■■□□ 2.11
GTF3A-204ENST00000438571 NOS1P29475 1434 aa28.26■■■□□ 2.11
GTF3A-204ENST00000438571 TXNDC2Q86VQ3 553 aa28.25■■■□□ 2.11
GTF3A-204ENST00000438571 UNC13BO14795 1591 aa28.24■■■□□ 2.11
GTF3A-204ENST00000438571 MED1Q15648 1581 aaPredicted RBP28.24■■■□□ 2.11
GTF3A-204ENST00000438571 TMEM2Q9UHN6 1383 aa28.24■■■□□ 2.11
GTF3A-204ENST00000438571 ANKRD50Q9ULJ7 1429 aa28.23■■■□□ 2.11
GTF3A-204ENST00000438571 IDI1Q13907 227 aa28.21■■■□□ 2.11
GTF3A-204ENST00000438571 E9PCH4 1651 aa28.19■■■□□ 2.1
GTF3A-204ENST00000438571 STAG3Q9UJ98 1225 aa28.16■■■□□ 2.1
GTF3A-204ENST00000438571 SOCS7O14512 581 aa28.15■■■□□ 2.1
GTF3A-204ENST00000438571 EID1Q9Y6B2 187 aa28.15■■■□□ 2.1
GTF3A-204ENST00000438571 RPRD2Q5VT52 1461 aaKnown RBP28.14■■■□□ 2.09
GTF3A-204ENST00000438571 SENP3Q9H4L4 574 aaPredicted RBP28.13■■■□□ 2.09
GTF3A-204ENST00000438571 TMEM131LA2VDJ0 1609 aa28.13■■■□□ 2.09
GTF3A-204ENST00000438571 IQGAP3Q86VI3 1631 aa28.12■■■□□ 2.09
GTF3A-204ENST00000438571 NWD1Q149M9 1564 aa28.1■■■□□ 2.09
GTF3A-204ENST00000438571 CHD2O14647 1828 aaKnown RBP28.07■■■□□ 2.08
GTF3A-204ENST00000438571 PPARGC1BQ86YN6 1023 aaKnown RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms