RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 PRIM1P49642 420 aaKnown RBP8.85□□□□□ -0.99
TRAPPC13-204ENST00000438419 PSDA5PKW4 1024 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC13-204ENST00000438419 BCANQ96GW7 911 aa8.84□□□□□ -0.99
TRAPPC13-204ENST00000438419 OSBPP22059 807 aa8.83□□□□□ -1
TRAPPC13-204ENST00000438419 PPP4R3BQ5MIZ7 849 aa8.82□□□□□ -1
TRAPPC13-204ENST00000438419 IFFO2Q5TF58 517 aa8.82□□□□□ -1
TRAPPC13-204ENST00000438419 STAC3Q96MF2 364 aa8.82□□□□□ -1
TRAPPC13-204ENST00000438419 A0A0G2JS52 829 aa8.81□□□□□ -1
TRAPPC13-204ENST00000438419 NBR1Q14596 966 aa8.81□□□□□ -1
TRAPPC13-204ENST00000438419 TYW1BQ6NUM6 668 aa8.81□□□□□ -1
TRAPPC13-204ENST00000438419 ZDHHC16Q969W1 377 aa8.81□□□□□ -1
TRAPPC13-204ENST00000438419 EPAS1Q99814 870 aa8.81□□□□□ -1
TRAPPC13-204ENST00000438419 ADAM33Q9BZ11 813 aa8.81□□□□□ -1
TRAPPC13-204ENST00000438419 ARHGAP33O14559 1287 aa8.8□□□□□ -1
TRAPPC13-204ENST00000438419 TK2O00142 265 aa8.79□□□□□ -1
TRAPPC13-204ENST00000438419 FBXW7Q969H0 707 aa8.79□□□□□ -1
TRAPPC13-204ENST00000438419 PTPN5P54829 565 aa8.78□□□□□ -1
TRAPPC13-204ENST00000438419 EN1Q05925 392 aaPredicted RBP8.78□□□□□ -1
TRAPPC13-204ENST00000438419 RBM33Q96EV2 1170 aaKnown RBP8.78□□□□□ -1
TRAPPC13-204ENST00000438419 BCL2L12Q9HB09 334 aa8.78□□□□□ -1
TRAPPC13-204ENST00000438419 HRO43593 1189 aa8.77□□□□□ -1.01
TRAPPC13-204ENST00000438419 TSR1Q2NL82 804 aaKnown RBP8.76□□□□□ -1.01
TRAPPC13-204ENST00000438419 C6orf132Q5T0Z8 1188 aa8.76□□□□□ -1.01
TRAPPC13-204ENST00000438419 RBM26Q5T8P6 1007 aaKnown RBP8.75□□□□□ -1.01
TRAPPC13-204ENST00000438419 MAP3K7O43318 606 aa8.74□□□□□ -1.01
TRAPPC13-204ENST00000438419 PSEN2P49810 448 aa8.74□□□□□ -1.01
TRAPPC13-204ENST00000438419 SMYD5Q6GMV2 418 aa8.74□□□□□ -1.01
TRAPPC13-204ENST00000438419 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.74□□□□□ -1.01
TRAPPC13-204ENST00000438419 CDHR5Q9HBB8 845 aa8.73□□□□□ -1.01
TRAPPC13-204ENST00000438419 COL9A1P20849 921 aa8.72□□□□□ -1.01
TRAPPC13-204ENST00000438419 PTPREP23469 700 aa8.72□□□□□ -1.01
TRAPPC13-204ENST00000438419 DMRTA1Q5VZB9 504 aa8.72□□□□□ -1.01
TRAPPC13-204ENST00000438419 KCNK17Q96T54 332 aa8.72□□□□□ -1.01
TRAPPC13-204ENST00000438419 NPDC1Q9NQX5 325 aaPredicted RBP8.71□□□□□ -1.01
TRAPPC13-204ENST00000438419 NUTM2FA1L443 756 aa8.68□□□□□ -1.02
TRAPPC13-204ENST00000438419 PPP1R3GB7ZBB8 358 aa8.68□□□□□ -1.02
TRAPPC13-204ENST00000438419 LMOD2Q6P5Q4 547 aa8.68□□□□□ -1.02
TRAPPC13-204ENST00000438419 GPR37O15354 613 aa8.67□□□□□ -1.02
TRAPPC13-204ENST00000438419 PTGDRQ13258 359 aa8.67□□□□□ -1.02
TRAPPC13-204ENST00000438419 ZBED2Q9BTP6 218 aa8.67□□□□□ -1.02
TRAPPC13-204ENST00000438419 TULP1O00294 542 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC13-204ENST00000438419 SLC4A5Q9BY07 1137 aa8.65□□□□□ -1.02
TRAPPC13-204ENST00000438419 PROX2Q3B8N5 592 aa8.64□□□□□ -1.03
TRAPPC13-204ENST00000438419 KCNH8Q96L42 1107 aa8.64□□□□□ -1.03
TRAPPC13-204ENST00000438419 TRAF7Q6Q0C0 670 aa8.63□□□□□ -1.03
TRAPPC13-204ENST00000438419 GPIHBP1Q8IV16 184 aa8.63□□□□□ -1.03
TRAPPC13-204ENST00000438419 CERKQ8TCT0 537 aa8.63□□□□□ -1.03
TRAPPC13-204ENST00000438419 FAM198AQ9UFP1 575 aa8.63□□□□□ -1.03
TRAPPC13-204ENST00000438419 VPS9D1Q9Y2B5 631 aa8.63□□□□□ -1.03
TRAPPC13-204ENST00000438419 PRSS12P56730 875 aa8.63□□□□□ -1.03
TRAPPC13-204ENST00000438419 LAPTM4AQ15012 233 aa8.63□□□□□ -1.03
TRAPPC13-204ENST00000438419 CDCA7LQ96GN5 454 aa8.63□□□□□ -1.03
TRAPPC13-204ENST00000438419 FCHSD2O94868 740 aa8.62□□□□□ -1.03
TRAPPC13-204ENST00000438419 TTC13Q8NBP0 860 aa8.62□□□□□ -1.03
TRAPPC13-204ENST00000438419 TSKSQ9UJT2 592 aa8.62□□□□□ -1.03
TRAPPC13-204ENST00000438419 TRIM6-TRIM34B2RNG4 842 aa8.61□□□□□ -1.03
TRAPPC13-204ENST00000438419 C3orf80F5H4A9 247 aa8.6□□□□□ -1.03
TRAPPC13-204ENST00000438419 FECHP22830 423 aa8.6□□□□□ -1.03
TRAPPC13-204ENST00000438419 PADI6Q6TGC4 694 aa8.6□□□□□ -1.03
TRAPPC13-204ENST00000438419 ONECUT3O60422 494 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC13-204ENST00000438419 HIC1Q14526 733 aa8.59□□□□□ -1.03
TRAPPC13-204ENST00000438419 THSD4Q6ZMP0 1018 aa8.59□□□□□ -1.03
TRAPPC13-204ENST00000438419 ZC3H15Q8WU90 426 aaKnown RBP8.59□□□□□ -1.03
TRAPPC13-204ENST00000438419 KIAA1468Q9P260 1216 aa8.59□□□□□ -1.03
TRAPPC13-204ENST00000438419 RBM27Q9P2N5 1060 aaKnown RBP8.59□□□□□ -1.03
TRAPPC13-204ENST00000438419 BHMG1C9JSJ3 638 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC13-204ENST00000438419 GNPATO15228 680 aa8.58□□□□□ -1.04
TRAPPC13-204ENST00000438419 RABGEF1Q9UJ41 708 aa8.57□□□□□ -1.04
TRAPPC13-204ENST00000438419 LCE2BO14633 110 aa8.56□□□□□ -1.04
TRAPPC13-204ENST00000438419 GOLGA8CPA6NN73 597 aa8.55□□□□□ -1.04
TRAPPC13-204ENST00000438419 ZMYND10O75800 440 aa8.55□□□□□ -1.04
TRAPPC13-204ENST00000438419 PACS2Q86VP3 889 aa8.54□□□□□ -1.04
TRAPPC13-204ENST00000438419 FAM161AQ3B820 660 aa8.54□□□□□ -1.04
TRAPPC13-204ENST00000438419 SMAPO00193 183 aa8.53□□□□□ -1.04
TRAPPC13-204ENST00000438419 GFRA3O60609 400 aa8.53□□□□□ -1.04
TRAPPC13-204ENST00000438419 BARGINQ6ZT62 677 aa8.53□□□□□ -1.04
TRAPPC13-204ENST00000438419 TATDN2Q93075 761 aa8.53□□□□□ -1.04
TRAPPC13-204ENST00000438419 ADGRG1Q9Y653 693 aa8.53□□□□□ -1.04
TRAPPC13-204ENST00000438419 NUDT18Q6ZVK8 323 aa8.52□□□□□ -1.05
TRAPPC13-204ENST00000438419 WNT2BQ93097 391 aa8.52□□□□□ -1.05
TRAPPC13-204ENST00000438419 EYA1Q99502 592 aa8.52□□□□□ -1.05
TRAPPC13-204ENST00000438419 SEPT9Q9UHD8 586 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC13-204ENST00000438419 ZNF787Q6DD87 383 aa8.51□□□□□ -1.05
TRAPPC13-204ENST00000438419 PNMA3Q9UL41 463 aa8.51□□□□□ -1.05
TRAPPC13-204ENST00000438419 MAP2K5Q13163 448 aa8.5□□□□□ -1.05
TRAPPC13-204ENST00000438419 NBPF26B4DH59 902 aa8.49□□□□□ -1.05
TRAPPC13-204ENST00000438419 MRPL50Q8N5N7 158 aaKnown RBP8.49□□□□□ -1.05
TRAPPC13-204ENST00000438419 NBPF3Q9H094 633 aa8.49□□□□□ -1.05
TRAPPC13-204ENST00000438419 IRF6O14896 467 aa8.48□□□□□ -1.05
TRAPPC13-204ENST00000438419 LAPTM4BQ86VI4 370 aa8.48□□□□□ -1.05
TRAPPC13-204ENST00000438419 MINK1Q8N4C8 1332 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC13-204ENST00000438419 FAM98CQ17RN3 349 aaKnown RBP8.47□□□□□ -1.05
TRAPPC13-204ENST00000438419 TPRNQ4KMQ1 711 aa8.47□□□□□ -1.05
TRAPPC13-204ENST00000438419 ZNF775Q96BV0 537 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC13-204ENST00000438419 PHOX2BQ99453 314 aa8.47□□□□□ -1.05
TRAPPC13-204ENST00000438419 ITGBL1O95965 494 aaPredicted RBP8.46□□□□□ -1.05
TRAPPC13-204ENST00000438419 METTL3Q86U44 580 aaKnown RBP8.46□□□□□ -1.05
TRAPPC13-204ENST00000438419 PXYLP1Q8TE99 480 aa8.46□□□□□ -1.05
TRAPPC13-204ENST00000438419 OATP04181 439 aa8.46□□□□□ -1.06
TRAPPC13-204ENST00000438419 RBM46Q8TBY0 533 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms