RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 NBPF1Q3BBV0 1214 aa17.53■□□□□ 0.4
HCG18-236ENST00000438412 DHX29Q7Z478 1369 aaKnown RBP17.52■□□□□ 0.39
HCG18-236ENST00000438412 RALGAPBQ86X10 1494 aa17.51■□□□□ 0.39
HCG18-236ENST00000438412 CCDC144AA2RUR9 1427 aa17.5■□□□□ 0.39
HCG18-236ENST00000438412 PLCH2O75038 1416 aa17.5■□□□□ 0.39
HCG18-236ENST00000438412 UHRF1BP1Q6BDS2 1440 aa17.5■□□□□ 0.39
HCG18-236ENST00000438412 RSPH4AQ5TD94 716 aa17.49■□□□□ 0.39
HCG18-236ENST00000438412 ROCK2O75116 1388 aaKnown RBP17.49■□□□□ 0.39
HCG18-236ENST00000438412 EFCAB2Q5VUJ9 269 aa17.48■□□□□ 0.39
HCG18-236ENST00000438412 UNC13BO14795 1591 aa17.47■□□□□ 0.39
HCG18-236ENST00000438412 MAST1Q9Y2H9 1570 aa17.47■□□□□ 0.39
HCG18-236ENST00000438412 NEFLP07196 543 aa17.46■□□□□ 0.39
HCG18-236ENST00000438412 TSHZ2Q9NRE2 1034 aa17.46■□□□□ 0.39
HCG18-236ENST00000438412 ABCC1P33527 1531 aa17.46■□□□□ 0.39
HCG18-236ENST00000438412 A2MP01023 1474 aa17.45■□□□□ 0.38
HCG18-236ENST00000438412 PLXNC1O60486 1568 aa17.45■□□□□ 0.38
HCG18-236ENST00000438412 PRAG1Q86YV5 1406 aa17.44■□□□□ 0.38
HCG18-236ENST00000438412 UHRF1BP1LA0JNW5 1464 aa17.43■□□□□ 0.38
HCG18-236ENST00000438412 MYT1LQ9UL68 1186 aa17.43■□□□□ 0.38
HCG18-236ENST00000438412 SPAG9O60271 1321 aaKnown RBP17.42■□□□□ 0.38
HCG18-236ENST00000438412 IQGAP3Q86VI3 1631 aa17.42■□□□□ 0.38
HCG18-236ENST00000438412 DUOX2Q9NRD8 1548 aa17.42■□□□□ 0.38
HCG18-236ENST00000438412 TRPM1Q7Z4N2 1603 aa17.4■□□□□ 0.38
HCG18-236ENST00000438412 WDR7Q9Y4E6 1490 aa17.37■□□□□ 0.37
HCG18-236ENST00000438412 ERBINQ96RT1 1412 aa17.37■□□□□ 0.37
HCG18-236ENST00000438412 ZFYVE16Q7Z3T8 1539 aa17.37■□□□□ 0.37
HCG18-236ENST00000438412 FANCAO15360 1455 aa17.36■□□□□ 0.37
HCG18-236ENST00000438412 MAGI2Q86UL8 1455 aa17.36■□□□□ 0.37
HCG18-236ENST00000438412 SCAPERQ9BY12 1400 aa17.35■□□□□ 0.37
HCG18-236ENST00000438412 DISP3Q9P2K9 1392 aa17.35■□□□□ 0.37
HCG18-236ENST00000438412 E9PCH4 1651 aa17.35■□□□□ 0.37
HCG18-236ENST00000438412 KIF3BO15066 747 aa17.33■□□□□ 0.37
HCG18-236ENST00000438412 ASXL2Q76L83 1435 aa17.33■□□□□ 0.36
HCG18-236ENST00000438412 ZBED9Q6R2W3 1325 aa17.33■□□□□ 0.36
HCG18-236ENST00000438412 TESK2Q96S53 571 aa17.31■□□□□ 0.36
HCG18-236ENST00000438412 ADGRL1O94910 1474 aa17.31■□□□□ 0.36
HCG18-236ENST00000438412 SALL2Q9Y467 1007 aaPredicted RBP17.3■□□□□ 0.36
HCG18-236ENST00000438412 ATP10AO60312 1499 aa17.3■□□□□ 0.36
HCG18-236ENST00000438412 UGGT1Q9NYU2 1555 aa17.3■□□□□ 0.36
HCG18-236ENST00000438412 TMC1Q8TDI8 760 aa17.3■□□□□ 0.36
HCG18-236ENST00000438412 CC2D1BQ5T0F9 858 aaKnown RBP17.29■□□□□ 0.36
HCG18-236ENST00000438412 ATP7AQ04656 1500 aa17.29■□□□□ 0.36
HCG18-236ENST00000438412 PNISRQ8TF01 805 aaKnown RBP17.29■□□□□ 0.36
HCG18-236ENST00000438412 ABCA9Q8IUA7 1624 aa17.29■□□□□ 0.36
HCG18-236ENST00000438412 ARID4BQ4LE39 1312 aaPredicted RBP17.28■□□□□ 0.36
HCG18-236ENST00000438412 CLTCL1P53675 1640 aa17.26■□□□□ 0.35
HCG18-236ENST00000438412 GPRASP1Q5JY77 1395 aa17.26■□□□□ 0.35
HCG18-236ENST00000438412 PRDM15P57071 1507 aaPredicted RBP17.26■□□□□ 0.35
HCG18-236ENST00000438412 INO80Q9ULG1 1556 aaPredicted RBP17.25■□□□□ 0.35
HCG18-236ENST00000438412 CFAP65Q6ZU64 1925 aaKnown RBP17.25■□□□□ 0.35
HCG18-236ENST00000438412 PANK3Q9H999 370 aa17.24■□□□□ 0.35
HCG18-236ENST00000438412 PER1O15534 1290 aaPredicted RBP17.23■□□□□ 0.35
HCG18-236ENST00000438412 COL17A1Q9UMD9 1497 aaPredicted RBP17.23■□□□□ 0.35
HCG18-236ENST00000438412 RTEL1-TNFRSF6BF6WH68 1400 aa17.23■□□□□ 0.35
HCG18-236ENST00000438412 SPHKAPQ2M3C7 1700 aa17.23■□□□□ 0.35
HCG18-236ENST00000438412 B4GALNT3Q6L9W6 998 aa17.22■□□□□ 0.35
HCG18-236ENST00000438412 OSCARQ8IYS5 282 aa17.22■□□□□ 0.35
HCG18-236ENST00000438412 MYBBP1AQ9BQG0 1328 aaKnown RBP17.22■□□□□ 0.35
HCG18-236ENST00000438412 ARAP3Q8WWN8 1544 aa17.21■□□□□ 0.35
HCG18-236ENST00000438412 DEPDC5O75140 1603 aa17.21■□□□□ 0.35
HCG18-236ENST00000438412 MADDQ8WXG6 1647 aa17.21■□□□□ 0.35
HCG18-236ENST00000438412 TRPM2O94759 1503 aa17.21■□□□□ 0.35
HCG18-236ENST00000438412 SENP3Q9H4L4 574 aaPredicted RBP17.21■□□□□ 0.35
HCG18-236ENST00000438412 MROH1Q8NDA8 1641 aa17.2■□□□□ 0.34
HCG18-236ENST00000438412 KIDINS220Q9ULH0 1771 aa17.19■□□□□ 0.34
HCG18-236ENST00000438412 RNF17Q9BXT8 1623 aaKnown RBP17.18■□□□□ 0.34
HCG18-236ENST00000438412 CEP152O94986 1710 aa17.18■□□□□ 0.34
HCG18-236ENST00000438412 EIF2AK4Q9P2K8 1649 aaKnown RBP17.18■□□□□ 0.34
HCG18-236ENST00000438412 PTPRTO14522 1441 aa17.18■□□□□ 0.34
HCG18-236ENST00000438412 TET3O43151 1660 aa17.17■□□□□ 0.34
HCG18-236ENST00000438412 CFAP70Q5T0N1 1121 aa17.17■□□□□ 0.34
HCG18-236ENST00000438412 GGT6Q6P531 493 aa17.17■□□□□ 0.34
HCG18-236ENST00000438412 KTN1Q86UP2 1357 aaKnown RBP17.17■□□□□ 0.34
HCG18-236ENST00000438412 RAPGEF3O95398 923 aa17.17■□□□□ 0.34
HCG18-236ENST00000438412 NPM1P06748 294 aaKnown RBP eCLIP17.17■□□□□ 0.34
HCG18-236ENST00000438412 TMF1P82094 1093 aa17.17■□□□□ 0.34
HCG18-236ENST00000438412 ADGRF5Q8IZF2 1346 aa17.17■□□□□ 0.34
HCG18-236ENST00000438412 PARD3Q8TEW0 1356 aa17.17■□□□□ 0.34
HCG18-236ENST00000438412 CHGAP10645 457 aaKnown RBP17.16■□□□□ 0.34
HCG18-236ENST00000438412 RALBP1Q15311 655 aa17.16■□□□□ 0.34
HCG18-236ENST00000438412 KANK1Q14678 1352 aa17.16■□□□□ 0.34
HCG18-236ENST00000438412 RBM19Q9Y4C8 960 aaKnown RBP17.15■□□□□ 0.34
HCG18-236ENST00000438412 LAMC1P11047 1609 aa17.15■□□□□ 0.34
HCG18-236ENST00000438412 LRPPRCP42704 1394 aaKnown RBP17.15■□□□□ 0.34
HCG18-236ENST00000438412 NUDCQ9Y266 331 aa17.15■□□□□ 0.34
HCG18-236ENST00000438412 VWDEQ8N2E2 1590 aa17.14■□□□□ 0.34
HCG18-236ENST00000438412 BRD4O60885 1362 aaPredicted RBP17.14■□□□□ 0.33
HCG18-236ENST00000438412 CD109Q6YHK3 1445 aa17.14■□□□□ 0.33
HCG18-236ENST00000438412 PPRC1Q5VV67 1664 aaKnown RBP17.13■□□□□ 0.33
HCG18-236ENST00000438412 SMG6Q86US8 1419 aaKnown RBP17.13■□□□□ 0.33
HCG18-236ENST00000438412 NUTM2DQ5VT03 806 aaPredicted RBP17.13■□□□□ 0.33
HCG18-236ENST00000438412 NLRP13Q86W25 1043 aa17.12■□□□□ 0.33
HCG18-236ENST00000438412 IQGAP1P46940 1657 aa17.12■□□□□ 0.33
HCG18-236ENST00000438412 MROH2AA6NES4 1674 aa17.12■□□□□ 0.33
HCG18-236ENST00000438412 CDCA7LQ96GN5 454 aa17.1■□□□□ 0.33
HCG18-236ENST00000438412 PPP4R2Q9NY27 417 aa17.1■□□□□ 0.33
HCG18-236ENST00000438412 ZNF518AQ6AHZ1 1483 aa17.1■□□□□ 0.33
HCG18-236ENST00000438412 FRMPD1Q5SYB0 1578 aa17.09■□□□□ 0.33
HCG18-236ENST00000438412 EFCAB6Q5THR3 1501 aa17.09■□□□□ 0.33
HCG18-236ENST00000438412 POGZQ7Z3K3 1410 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms