RNA–Protein interactions for RNA: ENST00000438354.6

LYVE1-202, Transcript of lymphatic vessel endothelial hyaluronan receptor 1, humanhuman

TSL 5

Gene LYVE1, Length 1,823 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYVE1-202ENST00000438354 WDR7Q9Y4E6 1490 aa11□□□□□ -0.65
LYVE1-202ENST00000438354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.99□□□□□ -0.65
LYVE1-202ENST00000438354 MAPKBP1O60336 1514 aa10.98□□□□□ -0.65
LYVE1-202ENST00000438354 ABCC10Q5T3U5 1492 aa10.98□□□□□ -0.65
LYVE1-202ENST00000438354 NBR1Q14596 966 aa10.98□□□□□ -0.65
LYVE1-202ENST00000438354 FARP1Q9Y4F1 1045 aaPredicted RBP10.97□□□□□ -0.65
LYVE1-202ENST00000438354 SUPT6HQ7KZ85 1726 aaKnown RBP10.97□□□□□ -0.65
LYVE1-202ENST00000438354 PCDHB8Q9UN66 801 aa10.95□□□□□ -0.66
LYVE1-202ENST00000438354 CDK11AQ9UQ88 783 aaPredicted RBP10.95□□□□□ -0.66
LYVE1-202ENST00000438354 PCDHB13Q9Y5F0 798 aa10.95□□□□□ -0.66
LYVE1-202ENST00000438354 KIF13AQ9H1H9 1805 aa10.95□□□□□ -0.66
LYVE1-202ENST00000438354 CDC42BPAQ5VT25 1732 aa10.95□□□□□ -0.66
LYVE1-202ENST00000438354 DIP2BQ9P265 1576 aa10.95□□□□□ -0.66
LYVE1-202ENST00000438354 ZNF644Q9H582 1327 aaPredicted RBP10.94□□□□□ -0.66
LYVE1-202ENST00000438354 GPATCH8Q9UKJ3 1502 aaKnown RBP10.94□□□□□ -0.66
LYVE1-202ENST00000438354 CDC42BPBQ9Y5S2 1711 aa10.93□□□□□ -0.66
LYVE1-202ENST00000438354 FAM69CQ0P6D2 419 aa10.92□□□□□ -0.66
LYVE1-202ENST00000438354 ABCA9Q8IUA7 1624 aa10.92□□□□□ -0.66
LYVE1-202ENST00000438354 TSPOAP1O95153 1857 aa10.92□□□□□ -0.66
LYVE1-202ENST00000438354 CCDC61Q9Y6R9 512 aa10.91□□□□□ -0.66
LYVE1-202ENST00000438354 CADPS2Q86UW7 1296 aa10.91□□□□□ -0.66
LYVE1-202ENST00000438354 CCNB3Q8WWL7 1395 aa10.9□□□□□ -0.66
LYVE1-202ENST00000438354 MYOM3Q5VTT5 1437 aa10.9□□□□□ -0.66
LYVE1-202ENST00000438354 PRKAR2AP13861 404 aaKnown RBP10.9□□□□□ -0.66
LYVE1-202ENST00000438354 PPRC1Q5VV67 1664 aaKnown RBP10.9□□□□□ -0.67
LYVE1-202ENST00000438354 MYO5CQ9NQX4 1742 aa10.9□□□□□ -0.67
LYVE1-202ENST00000438354 PREX2Q70Z35 1606 aa10.89□□□□□ -0.67
LYVE1-202ENST00000438354 MAP3K4Q9Y6R4 1608 aa10.89□□□□□ -0.67
LYVE1-202ENST00000438354 ZNF777Q9ULD5 760 aaPredicted RBP10.89□□□□□ -0.67
LYVE1-202ENST00000438354 FGD6Q6ZV73 1430 aa10.89□□□□□ -0.67
LYVE1-202ENST00000438354 ZNF467Q7Z7K2 595 aaPredicted RBP10.88□□□□□ -0.67
LYVE1-202ENST00000438354 SAMD9LQ8IVG5 1584 aa10.88□□□□□ -0.67
LYVE1-202ENST00000438354 PLCH2O75038 1416 aa10.87□□□□□ -0.67
LYVE1-202ENST00000438354 CD109Q6YHK3 1445 aa10.87□□□□□ -0.67
LYVE1-202ENST00000438354 GLI2P10070 1586 aa10.87□□□□□ -0.67
LYVE1-202ENST00000438354 PTPN23Q9H3S7 1636 aa10.87□□□□□ -0.67
LYVE1-202ENST00000438354 ARHGAP5Q13017 1502 aa10.86□□□□□ -0.67
LYVE1-202ENST00000438354 ARHGEF12Q9NZN5 1544 aa10.86□□□□□ -0.67
LYVE1-202ENST00000438354 RRBP1Q9P2E9 1410 aaKnown RBP10.86□□□□□ -0.67
LYVE1-202ENST00000438354 PDAP1Q13442 181 aaKnown RBP10.86□□□□□ -0.67
LYVE1-202ENST00000438354 CFDP1Q9UEE9 299 aaPredicted RBP10.86□□□□□ -0.67
LYVE1-202ENST00000438354 EIF5BO60841 1220 aaKnown RBP10.86□□□□□ -0.67
LYVE1-202ENST00000438354 ITGAEP38570 1179 aa10.86□□□□□ -0.67
LYVE1-202ENST00000438354 FAM50AQ14320 339 aaKnown RBP10.86□□□□□ -0.67
LYVE1-202ENST00000438354 TMEM132AQ24JP5 1023 aa10.86□□□□□ -0.67
LYVE1-202ENST00000438354 CAMSAP2Q08AD1 1489 aa10.85□□□□□ -0.67
LYVE1-202ENST00000438354 PTPRKQ15262 1439 aa10.85□□□□□ -0.67
LYVE1-202ENST00000438354 MFRPQ9BY79 579 aa10.85□□□□□ -0.67
LYVE1-202ENST00000438354 ITSN2Q9NZM3 1697 aa10.85□□□□□ -0.67
LYVE1-202ENST00000438354 HNRNPMP52272 730 aaKnown RBP eCLIP10.84□□□□□ -0.67
LYVE1-202ENST00000438354 RYDENQ9NUL5 291 aaKnown RBP10.84□□□□□ -0.67
LYVE1-202ENST00000438354 FXR2P51116 673 aaKnown RBP eCLIP10.84□□□□□ -0.67
LYVE1-202ENST00000438354 FANCAO15360 1455 aa10.83□□□□□ -0.68
LYVE1-202ENST00000438354 PSEN1P49768 467 aa10.83□□□□□ -0.68
LYVE1-202ENST00000438354 PCGF6Q9BYE7 350 aa10.83□□□□□ -0.68
LYVE1-202ENST00000438354 SYCP2Q9BX26 1530 aa10.82□□□□□ -0.68
LYVE1-202ENST00000438354 TCOF1Q13428 1488 aaKnown RBP10.82□□□□□ -0.68
LYVE1-202ENST00000438354 IFNL1Q8IU54 200 aa10.81□□□□□ -0.68
LYVE1-202ENST00000438354 MIA2Q96PC5 1412 aa10.81□□□□□ -0.68
LYVE1-202ENST00000438354 MBD5Q9P267 1494 aa10.81□□□□□ -0.68
LYVE1-202ENST00000438354 COL17A1Q9UMD9 1497 aaPredicted RBP10.81□□□□□ -0.68
LYVE1-202ENST00000438354 TRIM26Q12899 539 aaPredicted RBP10.81□□□□□ -0.68
LYVE1-202ENST00000438354 NPM2Q86SE8 214 aaKnown RBP10.81□□□□□ -0.68
LYVE1-202ENST00000438354 TRAPPC8Q9Y2L5 1435 aa10.81□□□□□ -0.68
LYVE1-202ENST00000438354 ABCC1P33527 1531 aa10.8□□□□□ -0.68
LYVE1-202ENST00000438354 AKNAQ7Z591 1439 aa10.8□□□□□ -0.68
LYVE1-202ENST00000438354 EFCAB2Q5VUJ9 269 aa10.79□□□□□ -0.68
LYVE1-202ENST00000438354 ZNF579Q8NAF0 562 aaKnown RBP10.79□□□□□ -0.68
LYVE1-202ENST00000438354 CHIC2Q9UKJ5 165 aa10.79□□□□□ -0.68
LYVE1-202ENST00000438354 ABCC5O15440 1437 aa10.79□□□□□ -0.68
LYVE1-202ENST00000438354 ARAP3Q8WWN8 1544 aa10.79□□□□□ -0.68
LYVE1-202ENST00000438354 RAPGEF3O95398 923 aa10.79□□□□□ -0.68
LYVE1-202ENST00000438354 AFAP1Q8N556 730 aa10.79□□□□□ -0.68
LYVE1-202ENST00000438354 KCNV2Q8TDN2 545 aa10.79□□□□□ -0.68
LYVE1-202ENST00000438354 MAP3K13O43283 966 aa10.78□□□□□ -0.68
LYVE1-202ENST00000438354 PPP1R37O75864 691 aa10.78□□□□□ -0.68
LYVE1-202ENST00000438354 ADGRL1O94910 1474 aa10.78□□□□□ -0.68
LYVE1-202ENST00000438354 SCAPERQ9BY12 1400 aa10.78□□□□□ -0.68
LYVE1-202ENST00000438354 DNMT1P26358 1616 aaKnown RBP10.77□□□□□ -0.69
LYVE1-202ENST00000438354 DAPK1P53355 1430 aa10.77□□□□□ -0.69
LYVE1-202ENST00000438354 FRMPD1Q5SYB0 1578 aa10.76□□□□□ -0.69
LYVE1-202ENST00000438354 CROCC2H7BZ55 1655 aa10.75□□□□□ -0.69
LYVE1-202ENST00000438354 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
LYVE1-202ENST00000438354 EFCAB3Q8N7B9 438 aa10.74□□□□□ -0.69
LYVE1-202ENST00000438354 KIF12Q96FN5 646 aa10.74□□□□□ -0.69
LYVE1-202ENST00000438354 NEO1Q92859 1461 aa10.74□□□□□ -0.69
LYVE1-202ENST00000438354 RICTORQ6R327 1708 aa10.74□□□□□ -0.69
LYVE1-202ENST00000438354 ARHGEF5Q12774 1597 aa10.73□□□□□ -0.69
LYVE1-202ENST00000438354 KDM6BO15054 1643 aa10.73□□□□□ -0.69
LYVE1-202ENST00000438354 KIAA1107Q9UPP5 1409 aa10.73□□□□□ -0.69
LYVE1-202ENST00000438354 FBXO22Q8NEZ5 403 aa10.73□□□□□ -0.69
LYVE1-202ENST00000438354 CABP2Q9NPB3 220 aa10.73□□□□□ -0.69
LYVE1-202ENST00000438354 RRP7BPQ9NSQ0 103 aa10.73□□□□□ -0.69
LYVE1-202ENST00000438354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.73□□□□□ -0.69
LYVE1-202ENST00000438354 POGZQ7Z3K3 1410 aa10.73□□□□□ -0.69
LYVE1-202ENST00000438354 CCDC141Q6ZP82 1450 aa10.73□□□□□ -0.69
LYVE1-202ENST00000438354 CFAP74Q9C0B2 1584 aa10.72□□□□□ -0.69
LYVE1-202ENST00000438354 CHRDL2Q6WN34 429 aa10.72□□□□□ -0.69
LYVE1-202ENST00000438354 C14orf37Q86TY3 774 aa10.72□□□□□ -0.69
LYVE1-202ENST00000438354 PHF8Q9UPP1 1060 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms