RNA–Protein interactions for RNA: ENST00000438347.1

CCND3P1-201, Transcript of cyclin D3 pseudogene 1, humanhuman

BASIC

Gene CCND3P1, Length 580 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3P1-201ENST00000438347 PPARGC1BQ86YN6 1023 aaKnown RBP20.36■□□□□ 0.85
CCND3P1-201ENST00000438347 FAM135AQ9P2D6 1515 aa20.36■□□□□ 0.85
CCND3P1-201ENST00000438347 UHRF1BP1Q6BDS2 1440 aa20.36■□□□□ 0.85
CCND3P1-201ENST00000438347 PTPRKQ15262 1439 aa20.35■□□□□ 0.85
CCND3P1-201ENST00000438347 NCOA1Q15788 1441 aa20.35■□□□□ 0.85
CCND3P1-201ENST00000438347 WASHC2CQ9Y4E1 1318 aa20.34■□□□□ 0.85
CCND3P1-201ENST00000438347 CHIC2Q9UKJ5 165 aa20.34■□□□□ 0.85
CCND3P1-201ENST00000438347 CROCC2H7BZ55 1655 aa20.34■□□□□ 0.85
CCND3P1-201ENST00000438347 SETD1BQ9UPS6 1966 aaKnown RBP20.34■□□□□ 0.85
CCND3P1-201ENST00000438347 ANKRD30AQ9BXX3 1397 aa20.34■□□□□ 0.85
CCND3P1-201ENST00000438347 CLTCQ00610 1675 aaKnown RBP20.33■□□□□ 0.85
CCND3P1-201ENST00000438347 ERBINQ96RT1 1412 aa20.32■□□□□ 0.84
CCND3P1-201ENST00000438347 KDM5DQ9BY66 1539 aa20.32■□□□□ 0.84
CCND3P1-201ENST00000438347 PREX1Q8TCU6 1659 aa20.32■□□□□ 0.84
CCND3P1-201ENST00000438347 ADGRL2O95490 1459 aa20.31■□□□□ 0.84
CCND3P1-201ENST00000438347 RNF17Q9BXT8 1623 aaKnown RBP20.31■□□□□ 0.84
CCND3P1-201ENST00000438347 EIF2AK4Q9P2K8 1649 aaKnown RBP20.31■□□□□ 0.84
CCND3P1-201ENST00000438347 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.29■□□□□ 0.84
CCND3P1-201ENST00000438347 PZPP20742 1482 aa20.27■□□□□ 0.84
CCND3P1-201ENST00000438347 FBXO31Q5XUX0 539 aaPredicted RBP20.27■□□□□ 0.84
CCND3P1-201ENST00000438347 MROH1Q8NDA8 1641 aa20.27■□□□□ 0.83
CCND3P1-201ENST00000438347 ABCC3O15438 1527 aa20.26■□□□□ 0.83
CCND3P1-201ENST00000438347 ROCK1Q13464 1354 aa20.22■□□□□ 0.83
CCND3P1-201ENST00000438347 PRDM15P57071 1507 aaPredicted RBP20.22■□□□□ 0.83
CCND3P1-201ENST00000438347 TNRQ92752 1358 aa20.21■□□□□ 0.83
CCND3P1-201ENST00000438347 RRBP1Q9P2E9 1410 aaKnown RBP20.21■□□□□ 0.83
CCND3P1-201ENST00000438347 ANKRD50Q9ULJ7 1429 aa20.2■□□□□ 0.82
CCND3P1-201ENST00000438347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.19■□□□□ 0.82
CCND3P1-201ENST00000438347 ZC3H13Q5T200 1668 aaKnown RBP20.19■□□□□ 0.82
CCND3P1-201ENST00000438347 ARHGAP31Q2M1Z3 1444 aa20.18■□□□□ 0.82
CCND3P1-201ENST00000438347 DEPDC5O75140 1603 aa20.17■□□□□ 0.82
CCND3P1-201ENST00000438347 CERKQ8TCT0 537 aa20.17■□□□□ 0.82
CCND3P1-201ENST00000438347 KANK1Q14678 1352 aa20.17■□□□□ 0.82
CCND3P1-201ENST00000438347 A2ML1A8K2U0 1454 aa20.17■□□□□ 0.82
CCND3P1-201ENST00000438347 CEP170BQ9Y4F5 1589 aaPredicted RBP20.17■□□□□ 0.82
CCND3P1-201ENST00000438347 MYO3AQ8NEV4 1616 aa20.16■□□□□ 0.82
CCND3P1-201ENST00000438347 ITGAEP38570 1179 aa20.16■□□□□ 0.82
CCND3P1-201ENST00000438347 VWDEQ8N2E2 1590 aa20.15■□□□□ 0.82
CCND3P1-201ENST00000438347 LMTK2Q8IWU2 1503 aa20.14■□□□□ 0.81
CCND3P1-201ENST00000438347 ERVK-7P63135 1459 aa20.14■□□□□ 0.81
CCND3P1-201ENST00000438347 PTPRTO14522 1441 aa20.14■□□□□ 0.81
CCND3P1-201ENST00000438347 ZNF142P52746 1687 aaPredicted RBP20.13■□□□□ 0.81
CCND3P1-201ENST00000438347 SPATA31D1Q6ZQQ2 1576 aa20.13■□□□□ 0.81
CCND3P1-201ENST00000438347 NLRP1Q9C000 1473 aa20.13■□□□□ 0.81
CCND3P1-201ENST00000438347 STRCQ7RTU9 1775 aa20.13■□□□□ 0.81
CCND3P1-201ENST00000438347 CAMSAP1Q5T5Y3 1602 aa20.13■□□□□ 0.81
CCND3P1-201ENST00000438347 PLA2R1Q13018 1463 aa20.12■□□□□ 0.81
CCND3P1-201ENST00000438347 PKD2Q13563 968 aa20.1■□□□□ 0.81
CCND3P1-201ENST00000438347 CEP152O94986 1710 aa20.1■□□□□ 0.81
CCND3P1-201ENST00000438347 NCKAP5LQ9HCH0 1330 aa20.08■□□□□ 0.81
CCND3P1-201ENST00000438347 THEMISQ8N1K5 641 aaPredicted RBP20.07■□□□□ 0.8
CCND3P1-201ENST00000438347 UGGT1Q9NYU2 1555 aa20.04■□□□□ 0.8
CCND3P1-201ENST00000438347 EFCAB6Q5THR3 1501 aa20.03■□□□□ 0.8
CCND3P1-201ENST00000438347 NOS1P29475 1434 aa20.02■□□□□ 0.8
CCND3P1-201ENST00000438347 UNC13BO14795 1591 aa20.02■□□□□ 0.8
CCND3P1-201ENST00000438347 RPRD2Q5VT52 1461 aaKnown RBP20.01■□□□□ 0.79
CCND3P1-201ENST00000438347 NAIPQ13075 1403 aa20.01■□□□□ 0.79
CCND3P1-201ENST00000438347 IQSEC2Q5JU85 1478 aa20■□□□□ 0.79
CCND3P1-201ENST00000438347 ANKLE2Q86XL3 938 aa20■□□□□ 0.79
CCND3P1-201ENST00000438347 NUP155O75694 1391 aa19.99■□□□□ 0.79
CCND3P1-201ENST00000438347 IDI1Q13907 227 aa19.99■□□□□ 0.79
CCND3P1-201ENST00000438347 SLC52A1Q9NWF4 448 aa19.97■□□□□ 0.79
CCND3P1-201ENST00000438347 HFM1A2PYH4 1435 aa19.96■□□□□ 0.79
CCND3P1-201ENST00000438347 TET3O43151 1660 aa19.95■□□□□ 0.78
CCND3P1-201ENST00000438347 SYNMO15061 1565 aa19.95■□□□□ 0.78
CCND3P1-201ENST00000438347 MED14O60244 1454 aa19.94■□□□□ 0.78
CCND3P1-201ENST00000438347 NEURL4Q96JN8 1562 aa19.94■□□□□ 0.78
CCND3P1-201ENST00000438347 IQGAP3Q86VI3 1631 aa19.94■□□□□ 0.78
CCND3P1-201ENST00000438347 ARHGAP23Q9P227 1491 aa19.93■□□□□ 0.78
CCND3P1-201ENST00000438347 LTBP4Q8N2S1 1624 aa19.92■□□□□ 0.78
CCND3P1-201ENST00000438347 CFAP65Q6ZU64 1925 aaKnown RBP19.92■□□□□ 0.78
CCND3P1-201ENST00000438347 UBR1Q8IWV7 1749 aa19.91■□□□□ 0.78
CCND3P1-201ENST00000438347 ZNF335Q9H4Z2 1342 aaPredicted RBP19.91■□□□□ 0.78
CCND3P1-201ENST00000438347 NPHP4O75161 1426 aaPredicted RBP19.91■□□□□ 0.78
CCND3P1-201ENST00000438347 SLIT1O75093 1534 aa19.91■□□□□ 0.78
CCND3P1-201ENST00000438347 LTKP29376 864 aa19.9■□□□□ 0.78
CCND3P1-201ENST00000438347 STAG3Q9UJ98 1225 aa19.9■□□□□ 0.78
CCND3P1-201ENST00000438347 TMEM2Q9UHN6 1383 aa19.9■□□□□ 0.78
CCND3P1-201ENST00000438347 PIK3C2BO00750 1634 aa19.89■□□□□ 0.77
CCND3P1-201ENST00000438347 TXNDC2Q86VQ3 553 aa19.89■□□□□ 0.77
CCND3P1-201ENST00000438347 GCC2Q8IWJ2 1684 aa19.88■□□□□ 0.77
CCND3P1-201ENST00000438347 SCAF11Q99590 1463 aaKnown RBP19.88■□□□□ 0.77
CCND3P1-201ENST00000438347 POLR1AO95602 1720 aaPredicted RBP19.86■□□□□ 0.77
CCND3P1-201ENST00000438347 EID1Q9Y6B2 187 aa19.86■□□□□ 0.77
CCND3P1-201ENST00000438347 E9PCH4 1651 aa19.86■□□□□ 0.77
CCND3P1-201ENST00000438347 KDM5AP29375 1690 aaKnown RBP19.86■□□□□ 0.77
CCND3P1-201ENST00000438347 ADGRB3O60242 1522 aa19.85■□□□□ 0.77
CCND3P1-201ENST00000438347 TRIM52Q96A61 297 aa19.81■□□□□ 0.76
CCND3P1-201ENST00000438347 IQGAP1P46940 1657 aa19.79■□□□□ 0.76
CCND3P1-201ENST00000438347 ZFYVE9O95405 1425 aa19.78■□□□□ 0.76
CCND3P1-201ENST00000438347 TMEM131LA2VDJ0 1609 aa19.77■□□□□ 0.76
CCND3P1-201ENST00000438347 SLC4A1APQ9BWU0 796 aaKnown RBP19.77■□□□□ 0.76
CCND3P1-201ENST00000438347 CHGAP10645 457 aaKnown RBP19.76■□□□□ 0.75
CCND3P1-201ENST00000438347 CPS1P31327 1500 aa19.76■□□□□ 0.75
CCND3P1-201ENST00000438347 RIMS2Q9UQ26 1411 aa19.76■□□□□ 0.75
CCND3P1-201ENST00000438347 HDGFP51858 240 aaKnown RBP19.75■□□□□ 0.75
CCND3P1-201ENST00000438347 SETD5Q9C0A6 1442 aa19.74■□□□□ 0.75
CCND3P1-201ENST00000438347 TOM1O60784 492 aa19.73■□□□□ 0.75
CCND3P1-201ENST00000438347 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.73■□□□□ 0.75
CCND3P1-201ENST00000438347 ACIN1Q9UKV3 1341 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms