RNA–Protein interactions for RNA: ENST00000438169.6

KRR1-202, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 1 (best) BASIC

Gene KRR1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-202ENST00000438169 KIAA1468Q9P260 1216 aa10.25□□□□□ -0.77
KRR1-202ENST00000438169 SEPT9Q9UHD8 586 aaPredicted RBP10.24□□□□□ -0.77
KRR1-202ENST00000438169 NRG2O14511 850 aaPredicted RBP10.22□□□□□ -0.77
KRR1-202ENST00000438169 ZNF775Q96BV0 537 aaPredicted RBP10.22□□□□□ -0.77
KRR1-202ENST00000438169 NKX1-1Q15270 411 aaPredicted RBP10.21□□□□□ -0.77
KRR1-202ENST00000438169 HS6ST3Q8IZP7 471 aa10.21□□□□□ -0.77
KRR1-202ENST00000438169 PRKD2Q9BZL6 878 aa10.21□□□□□ -0.77
KRR1-202ENST00000438169 ZNF787Q6DD87 383 aa10.19□□□□□ -0.78
KRR1-202ENST00000438169 EMILIN3Q9NT22 766 aa10.18□□□□□ -0.78
KRR1-202ENST00000438169 HPS5Q9UPZ3 1129 aa10.18□□□□□ -0.78
KRR1-202ENST00000438169 TSR3Q9UJK0 312 aaKnown RBP10.17□□□□□ -0.78
KRR1-202ENST00000438169 MAP3K9P80192 1104 aa10.14□□□□□ -0.79
KRR1-202ENST00000438169 TJAP1Q5JTD0 557 aa10.14□□□□□ -0.79
KRR1-202ENST00000438169 ONECUT3O60422 494 aaPredicted RBP10.13□□□□□ -0.79
KRR1-202ENST00000438169 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.13□□□□□ -0.79
KRR1-202ENST00000438169 PDE4AP27815 886 aa10.12□□□□□ -0.79
KRR1-202ENST00000438169 FAM98CQ17RN3 349 aaKnown RBP10.12□□□□□ -0.79
KRR1-202ENST00000438169 TYW1BQ6NUM6 668 aa10.12□□□□□ -0.79
KRR1-202ENST00000438169 PPP1R18Q6NYC8 613 aa10.12□□□□□ -0.79
KRR1-202ENST00000438169 TRIM6-TRIM34B2RNG4 842 aa10.11□□□□□ -0.79
KRR1-202ENST00000438169 PHF14O94880 888 aa10.11□□□□□ -0.79
KRR1-202ENST00000438169 C6orf132Q5T0Z8 1188 aa10.1□□□□□ -0.79
KRR1-202ENST00000438169 LRCH3Q96II8 777 aa10.1□□□□□ -0.79
KRR1-202ENST00000438169 FBXW7Q969H0 707 aa10.09□□□□□ -0.79
KRR1-202ENST00000438169 LARP6Q9BRS8 491 aaKnown RBP10.09□□□□□ -0.79
KRR1-202ENST00000438169 V9GY48 417 aaPredicted RBP10.09□□□□□ -0.79
KRR1-202ENST00000438169 MFSD10Q14728 455 aa10.07□□□□□ -0.8
KRR1-202ENST00000438169 DDX27Q96GQ7 796 aaKnown RBP10.07□□□□□ -0.8
KRR1-202ENST00000438169 CHGAP10645 457 aaKnown RBP10.06□□□□□ -0.8
KRR1-202ENST00000438169 DNAJC5Q9H3Z4 198 aa10.06□□□□□ -0.8
KRR1-202ENST00000438169 PDZRN3Q9UPQ7 1066 aa10.06□□□□□ -0.8
KRR1-202ENST00000438169 ZNF516Q92618 1163 aa10.05□□□□□ -0.8
KRR1-202ENST00000438169 MTRQ99707 1265 aa10.05□□□□□ -0.8
KRR1-202ENST00000438169 TSKSQ9UJT2 592 aa10.04□□□□□ -0.8
KRR1-202ENST00000438169 POTECB2RU33 542 aa10.02□□□□□ -0.81
KRR1-202ENST00000438169 PPP4CP60510 307 aa10.02□□□□□ -0.81
KRR1-202ENST00000438169 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.01□□□□□ -0.81
KRR1-202ENST00000438169 NKX2-3Q8TAU0 364 aa10□□□□□ -0.81
KRR1-202ENST00000438169 C3orf80F5H4A9 247 aa9.99□□□□□ -0.81
KRR1-202ENST00000438169 TRIM67Q6ZTA4 783 aa9.99□□□□□ -0.81
KRR1-202ENST00000438169 SAMD7Q7Z3H4 446 aa9.99□□□□□ -0.81
KRR1-202ENST00000438169 RBM33Q96EV2 1170 aaKnown RBP9.99□□□□□ -0.81
KRR1-202ENST00000438169 IL21Q9HBE4 155 aa9.99□□□□□ -0.81
KRR1-202ENST00000438169 SMAPO00193 183 aa9.97□□□□□ -0.81
KRR1-202ENST00000438169 EPAS1Q99814 870 aa9.97□□□□□ -0.81
KRR1-202ENST00000438169 LCE2AQ5TA79 106 aaPredicted RBP9.96□□□□□ -0.82
KRR1-202ENST00000438169 FAM198AQ9UFP1 575 aa9.95□□□□□ -0.82
KRR1-202ENST00000438169 TSR1Q2NL82 804 aaKnown RBP9.94□□□□□ -0.82
KRR1-202ENST00000438169 MYT1Q01538 1121 aa9.93□□□□□ -0.82
KRR1-202ENST00000438169 EMID1Q96A84 441 aaPredicted RBP9.93□□□□□ -0.82
KRR1-202ENST00000438169 GTPBP6O43824 516 aaPredicted RBP9.92□□□□□ -0.82
KRR1-202ENST00000438169 APLP1P51693 650 aa9.92□□□□□ -0.82
KRR1-202ENST00000438169 RYDENQ9NUL5 291 aaKnown RBP9.92□□□□□ -0.82
KRR1-202ENST00000438169 CADPS2Q86UW7 1296 aa9.91□□□□□ -0.82
KRR1-202ENST00000438169 DDX12PQ92771 950 aa9.91□□□□□ -0.82
KRR1-202ENST00000438169 PACS2Q86VP3 889 aa9.9□□□□□ -0.82
KRR1-202ENST00000438169 DPYSL4O14531 572 aa9.89□□□□□ -0.83
KRR1-202ENST00000438169 EN1Q05925 392 aaPredicted RBP9.87□□□□□ -0.83
KRR1-202ENST00000438169 CAMK2BQ13554 666 aa9.87□□□□□ -0.83
KRR1-202ENST00000438169 TREML4Q6UXN2 200 aa9.85□□□□□ -0.83
KRR1-202ENST00000438169 CDCA7LQ96GN5 454 aa9.85□□□□□ -0.83
KRR1-202ENST00000438169 PRIM1P49642 420 aaKnown RBP9.83□□□□□ -0.84
KRR1-202ENST00000438169 COPS2P61201 443 aa9.83□□□□□ -0.84
KRR1-202ENST00000438169 NBR1Q14596 966 aa9.82□□□□□ -0.84
KRR1-202ENST00000438169 PKDCCQ504Y2 493 aa9.82□□□□□ -0.84
KRR1-202ENST00000438169 TATDN2Q93075 761 aa9.82□□□□□ -0.84
KRR1-202ENST00000438169 MAP3K7O43318 606 aa9.81□□□□□ -0.84
KRR1-202ENST00000438169 PRSS12P56730 875 aa9.81□□□□□ -0.84
KRR1-202ENST00000438169 RNF40O75150 1001 aa9.8□□□□□ -0.84
KRR1-202ENST00000438169 DGAT1O75907 488 aa9.8□□□□□ -0.84
KRR1-202ENST00000438169 TMUB1Q9BVT8 246 aa9.8□□□□□ -0.84
KRR1-202ENST00000438169 PNMA3Q9UL41 463 aa9.8□□□□□ -0.84
KRR1-202ENST00000438169 SLC19A1P41440 591 aa9.79□□□□□ -0.84
KRR1-202ENST00000438169 RNF223E7ERA6 249 aa9.78□□□□□ -0.84
KRR1-202ENST00000438169 ST8SIA5O15466 376 aa9.78□□□□□ -0.84
KRR1-202ENST00000438169 GGCXP38435 758 aa9.77□□□□□ -0.85
KRR1-202ENST00000438169 PRR20EP86478 221 aa9.77□□□□□ -0.85
KRR1-202ENST00000438169 PRR20CP86479 221 aa9.77□□□□□ -0.85
KRR1-202ENST00000438169 PRR20DP86480 221 aa9.77□□□□□ -0.85
KRR1-202ENST00000438169 PRR20BP86481 221 aa9.77□□□□□ -0.85
KRR1-202ENST00000438169 PRR20AP86496 221 aa9.77□□□□□ -0.85
KRR1-202ENST00000438169 SPRYD7Q5W111 196 aa9.77□□□□□ -0.85
KRR1-202ENST00000438169 ZPR1O75312 459 aa9.76□□□□□ -0.85
KRR1-202ENST00000438169 NUDT18Q6ZVK8 323 aa9.75□□□□□ -0.85
KRR1-202ENST00000438169 GDF9O60383 454 aa9.74□□□□□ -0.85
KRR1-202ENST00000438169 ZNF598Q86UK7 904 aaKnown RBP9.74□□□□□ -0.85
KRR1-202ENST00000438169 AAASQ9NRG9 546 aa9.74□□□□□ -0.85
KRR1-202ENST00000438169 FAM187AA6NFU0 413 aa9.73□□□□□ -0.85
KRR1-202ENST00000438169 NBPF26B4DH59 902 aa9.73□□□□□ -0.85
KRR1-202ENST00000438169 LIAT1Q6ZQX7 453 aa9.73□□□□□ -0.85
KRR1-202ENST00000438169 TNFRSF10AO00220 468 aa9.72□□□□□ -0.85
KRR1-202ENST00000438169 PPEF1O14829 653 aaPredicted RBP9.72□□□□□ -0.85
KRR1-202ENST00000438169 SWT1Q5T5J6 900 aaKnown RBP9.71□□□□□ -0.86
KRR1-202ENST00000438169 CDHR5Q9HBB8 845 aa9.71□□□□□ -0.86
KRR1-202ENST00000438169 TLL1O43897 1013 aa9.7□□□□□ -0.86
KRR1-202ENST00000438169 PDIA6Q15084 440 aa9.7□□□□□ -0.86
KRR1-202ENST00000438169 DACH1Q9UI36 760 aa9.7□□□□□ -0.86
KRR1-202ENST00000438169 ZNF697Q5TEC3 545 aa9.69□□□□□ -0.86
KRR1-202ENST00000438169 LOC100996750A0A140TA64 210 aa9.67□□□□□ -0.86
KRR1-202ENST00000438169 LCE2CQ5TA81 110 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms